prot_M-pyrifera_M_contig87501.20327.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig87501.20327.1
Unique Nameprot_M-pyrifera_M_contig87501.20327.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length46
Homology
BLAST of mRNA_M-pyrifera_M_contig87501.20327.1 vs. uniprot
Match: A0A5E5AEL4_9BURK (DUF4224 domain-containing protein n=2 Tax=Pandoraea anapnoica TaxID=2508301 RepID=A0A5E5AEL4_9BURK)

HSP 1 Score: 54.3 bits (129), Expect = 1.580e-8
Identity = 25/45 (55.56%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    2 LHLTESELAEITGRVRSAAQSRALSAMGIPFKVNPDGKILVVREH 46
            + LT+SE+ E+TGRVR  +Q+  LSA+GI  KV PDG +LV+R H
Sbjct:    8 IFLTQSEIREMTGRVRHKSQTLVLSALGIEHKVRPDGSLLVLRSH 52          
BLAST of mRNA_M-pyrifera_M_contig87501.20327.1 vs. uniprot
Match: UPI00096A95B1 (DUF4224 domain-containing protein n=1 Tax=Halomonas massiliensis TaxID=1816686 RepID=UPI00096A95B1)

HSP 1 Score: 47.0 bits (110), Expect = 1.120e-5
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    2 LHLTESELAEITGRVRSAAQSRALSAMGIPFKVNPDGKILVVREH 46
            L LT  EL ++TGR ++ +Q  AL AMGI +K+N  GK+LV R+H
Sbjct:    4 LFLTAEELIQLTGRKQTKSQREALDAMGIYWKINAAGKLLVGRKH 48          
BLAST of mRNA_M-pyrifera_M_contig87501.20327.1 vs. uniprot
Match: UPI0018E09BE6 (DUF4224 domain-containing protein n=1 Tax=Halomonas elongata TaxID=2746 RepID=UPI0018E09BE6)

HSP 1 Score: 45.8 bits (107), Expect = 3.190e-5
Identity = 23/45 (51.11%), Postives = 29/45 (64.44%), Query Frame = 0
Query:    2 LHLTESELAEITGRVRSAAQSRALSAMGIPFKVNPDGKILVVREH 46
            L LT  EL E+TGR R   QS  L+AMGI +K N  G+++V R H
Sbjct:    3 LFLTSEELEELTGRKRRKEQSETLTAMGIRWKTNAAGELIVGRSH 47          
BLAST of mRNA_M-pyrifera_M_contig87501.20327.1 vs. uniprot
Match: A0A4S1E765_9BURK (DUF4224 domain-containing protein n=1 Tax=Alcaligenaceae bacterium 429 TaxID=2562948 RepID=A0A4S1E765_9BURK)

HSP 1 Score: 45.8 bits (107), Expect = 4.310e-5
Identity = 19/43 (44.19%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    2 LHLTESELAEITGRVRSAAQSRALSAMGIPFKVNPDGKILVVR 44
            L L + EL EITG+ R+  +   L+ MGIPF++ PDG ++V++
Sbjct:   10 LTLNDPELTEITGKTRNKGRIEVLTQMGIPFRIRPDGSLVVLK 52          
BLAST of mRNA_M-pyrifera_M_contig87501.20327.1 vs. uniprot
Match: A0A4V3G204_9GAMM (Uncharacterized protein DUF4224 n=1 Tax=Halomonas alkaliantarctica TaxID=232346 RepID=A0A4V3G204_9GAMM)

HSP 1 Score: 44.7 bits (104), Expect = 9.090e-5
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0
Query:    2 LHLTESELAEITGRVRSAAQSRALSAMGIPFKVNPDGKILVVREH 46
            L LT  E+  +TGR +  +Q  AL AMGI +KVN  GK+LV R+H
Sbjct:    4 LFLTVEEMVRLTGRKQYKSQREALDAMGIYWKVNAAGKLLVGRKH 48          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87501.20327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A5E5AEL4_9BURK1.580e-855.56DUF4224 domain-containing protein n=2 Tax=Pandorae... [more]
UPI00096A95B11.120e-551.11DUF4224 domain-containing protein n=1 Tax=Halomona... [more]
UPI0018E09BE63.190e-551.11DUF4224 domain-containing protein n=1 Tax=Halomona... [more]
A0A4S1E765_9BURK4.310e-544.19DUF4224 domain-containing protein n=1 Tax=Alcalige... [more]
A0A4V3G204_9GAMM9.090e-551.11Uncharacterized protein DUF4224 n=1 Tax=Halomonas ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025319Domain of unknown function DUF4224PFAMPF13986DUF4224coord: 4..46
e-value: 6.4E-16
score: 58.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87501contigM-pyrifera_M_contig87501:543..680 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87501.20327.1mRNA_M-pyrifera_M_contig87501.20327.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig87501 534..680 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig87501.20327.1 ID=prot_M-pyrifera_M_contig87501.20327.1|Name=mRNA_M-pyrifera_M_contig87501.20327.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=46bp
MLHLTESELAEITGRVRSAAQSRALSAMGIPFKVNPDGKILVVREH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025319DUF4224