mRNA_M-pyrifera_M_contig87420.20316.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig87420.20316.1 vs. uniprot
Match: A0A7K8QVH0_9PASS (TCF25 factor (Fragment) n=1 Tax=Smithornis capensis TaxID=363769 RepID=A0A7K8QVH0_9PASS) HSP 1 Score: 105 bits (261), Expect = 4.930e-23 Identity = 62/174 (35.63%), Postives = 98/174 (56.32%), Query Frame = 1 Query: 1 GLGMRMERKEGGSVEFVVEFGEEYASARKLFHSLAGAMDLESILHLARAKPWLLEAQLQVAEYARATGNAEDAFQTLSNAVATLECALHPSFLSAFTTPSSSSNPPRLPWRCPENRIIFTLLWRYALLLGRRGAPESAFHVMRLVLSFDPPNDPLHILLLIDSLALRAKDFQWL 522 G+ MR+ +GG F E EY + F ++D +I+ L + P+ +++ LQ+++ R + E A + A+ +LECA HP F S +S RL +R PENR F L+++ + L +RG P +A +L+LS DP NDPL +LLLID L+LRA+++ +L Sbjct: 223 GITMRLLDTQGGVQHFTFEHHREYQQVQYKFLDTVESIDPNNIVLLLQMNPYHVDSLLQLSDVCRMQDDQEMARDLIERALYSLECAFHPVF-------SLTSGTCRLDYRRPENRAFFLALFKHLMFLEKRGCPRTALEFCKLILSLDPENDPLCVLLLIDFLSLRAREYTFL 389
BLAST of mRNA_M-pyrifera_M_contig87420.20316.1 vs. uniprot
Match: A0A7L1D0R9_9PASS (TCF25 factor (Fragment) n=8 Tax=Passeriformes TaxID=9126 RepID=A0A7L1D0R9_9PASS) HSP 1 Score: 104 bits (260), Expect = 6.460e-23 Identity = 62/174 (35.63%), Postives = 98/174 (56.32%), Query Frame = 1 Query: 1 GLGMRMERKEGGSVEFVVEFGEEYASARKLFHSLAGAMDLESILHLARAKPWLLEAQLQVAEYARATGNAEDAFQTLSNAVATLECALHPSFLSAFTTPSSSSNPPRLPWRCPENRIIFTLLWRYALLLGRRGAPESAFHVMRLVLSFDPPNDPLHILLLIDSLALRAKDFQWL 522 G+ MR+ +GG F E EY + F ++D +I+ L + P+ +++ LQ+++ R + E A + A+ +LECA HP F S +S RL +R PENR F L+++ + L +RG P +A +L+LS DP NDPL +LLLID L+LRA+++ +L Sbjct: 178 GITMRLLDTQGGVQHFTFEHHREYQQVQYKFLDTVESIDPNNIVLLLQMNPYHVDSLLQLSDVCRMQEDQEMARDLIERALYSLECAFHPVF-------SLTSGTCRLDYRRPENRAFFLALFKHLMFLEKRGCPRTALEFCKLILSLDPENDPLCVLLLIDFLSLRAREYTFL 344
BLAST of mRNA_M-pyrifera_M_contig87420.20316.1 vs. uniprot
Match: G3W2Y9_SARHA (Transcription factor 25 n=10 Tax=Metatheria TaxID=9263 RepID=G3W2Y9_SARHA) HSP 1 Score: 104 bits (260), Expect = 6.830e-23 Identity = 63/175 (36.00%), Postives = 99/175 (56.57%), Query Frame = 1 Query: 1 GLGMRMERKEGGSVEFVVEFGEEYASARKLFHSLAGAMDLESILHLARAKPWLLEAQLQVAEYARATGNAEDAFQTLSNAVATLECALHPSFLSAFTTPSSSSNPPRLPWRCPENRIIFTLLWRYALLLGRRGAPESAFHVMRLVLSFDPPNDPLHILLLIDSLALRAKDFQWLL 525 G+ MR+ + G F E EY + F S +MD +I+ L + P+ +++ LQ+++ R + E A + A+ +LECA HP F S +S RL +R ENR + +L+++ + L RRG P +A +L+LS DP NDPL +LL+ID LALRA+D+ +L+ Sbjct: 244 GITMRVLESKRGVQHFTFEHHREYQQVQFQFLSAVESMDPNNIVLLLQGNPYHIDSLLQLSDVCRLQEDQEMARDLIERALYSLECAFHPLF-------SLTSGTCRLDYRRTENRAFYLVLFKHMMFLERRGCPRTALEFCKLILSLDPDNDPLCLLLIIDLLALRARDYGFLI 411
BLAST of mRNA_M-pyrifera_M_contig87420.20316.1 vs. uniprot
Match: A0A671EYK9_RHIFE (Transcription factor 25 n=9 Tax=Microchiroptera TaxID=30560 RepID=A0A671EYK9_RHIFE) HSP 1 Score: 103 bits (258), Expect = 1.290e-22 Identity = 63/175 (36.00%), Postives = 99/175 (56.57%), Query Frame = 1 Query: 1 GLGMRMERKEGGSVEFVVEFGEEYASARKLFHSLAGAMDLESILHLARAKPWLLEAQLQVAEYARATGNAEDAFQTLSNAVATLECALHPSFLSAFTTPSSSSNPPRLPWRCPENRIIFTLLWRYALLLGRRGAPESAFHVMRLVLSFDPPNDPLHILLLIDSLALRAKDFQWLL 525 GL MR+ + G F E EEY A+ F S +M+ +I+ L + P+ +++ LQ+++ R + E A + A+ ++ECA HP F S +S RL +R PENR + L++ L +RG P +A +L+LS +P DPL +LLLID LALRA+D+++L+ Sbjct: 291 GLSMRLLQSRKGLSCFAFEHNEEYQQAQLRFLSAVESMEPNNIVVLLQTSPYHVDSLLQLSDACRFQEDQEMARDLVERALYSMECAFHPLF-------SLTSGTCRLDYRRPENRSFYLALYKQMSFLEKRGCPRTALEYCKLILSLEPDEDPLCVLLLIDHLALRARDYEYLI 458
BLAST of mRNA_M-pyrifera_M_contig87420.20316.1 vs. uniprot
Match: UPI0003C90CCC (LOW QUALITY PROTEIN: transcription factor 25 n=1 Tax=Tupaia chinensis TaxID=246437 RepID=UPI0003C90CCC) HSP 1 Score: 103 bits (257), Expect = 1.710e-22 Identity = 63/175 (36.00%), Postives = 98/175 (56.00%), Query Frame = 1 Query: 1 GLGMRMERKEGGSVEFVVEFGEEYASARKLFHSLAGAMDLESILHLARAKPWLLEAQLQVAEYARATGNAEDAFQTLSNAVATLECALHPSFLSAFTTPSSSSNPPRLPWRCPENRIIFTLLWRYALLLGRRGAPESAFHVMRLVLSFDPPNDPLHILLLIDSLALRAKDFQWLL 525 GL MR+ + G F E EEY A+ F +M+ +I+ L + P+ +++ LQ+++ R + E A + A+ ++ECA HP F S +S RL +R PENR + L++ L RRG P +A +L+LS +P DPL +LLLID LALRA+D+++L+ Sbjct: 232 GLSMRLLESKKGLSFFAFEHSEEYQQAQHKFLMAVESMEPNNIVVLLQTSPYHVDSLLQLSDACRFQEDQEMARDLIERALYSMECAFHPLF-------SLTSGTCRLDYRRPENRSFYLALYKQMSFLERRGCPRTALEYCKLILSLEPDEDPLCMLLLIDHLALRARDYEYLI 399
BLAST of mRNA_M-pyrifera_M_contig87420.20316.1 vs. uniprot
Match: L9KK39_TUPCH (Transcription factor 25 n=2 Tax=Boreoeutheria TaxID=1437010 RepID=L9KK39_TUPCH) HSP 1 Score: 103 bits (257), Expect = 1.920e-22 Identity = 63/175 (36.00%), Postives = 98/175 (56.00%), Query Frame = 1 Query: 1 GLGMRMERKEGGSVEFVVEFGEEYASARKLFHSLAGAMDLESILHLARAKPWLLEAQLQVAEYARATGNAEDAFQTLSNAVATLECALHPSFLSAFTTPSSSSNPPRLPWRCPENRIIFTLLWRYALLLGRRGAPESAFHVMRLVLSFDPPNDPLHILLLIDSLALRAKDFQWLL 525 GL MR+ + G F E EEY A+ F +M+ +I+ L + P+ +++ LQ+++ R + E A + A+ ++ECA HP F S +S RL +R PENR + L++ L RRG P +A +L+LS +P DPL +LLLID LALRA+D+++L+ Sbjct: 837 GLSMRLLESKKGLSFFAFEHSEEYQQAQHKFLMAVESMEPNNIVVLLQTSPYHVDSLLQLSDACRFQEDQEMARDLIERALYSMECAFHPLF-------SLTSGTCRLDYRRPENRSFYLALYKQMSFLERRGCPRTALEYCKLILSLEPDEDPLCMLLLIDHLALRARDYEYLI 1004
BLAST of mRNA_M-pyrifera_M_contig87420.20316.1 vs. uniprot
Match: A0A663MTC1_ATHCN (Transcription factor 25 n=3 Tax=Athene cunicularia TaxID=194338 RepID=A0A663MTC1_ATHCN) HSP 1 Score: 101 bits (252), Expect = 5.250e-22 Identity = 61/174 (35.06%), Postives = 96/174 (55.17%), Query Frame = 1 Query: 1 GLGMRMERKEGGSVEFVVEFGEEYASARKLFHSLAGAMDLESILHLARAKPWLLEAQLQVAEYARATGNAEDAFQTLSNAVATLECALHPSFLSAFTTPSSSSNPPRLPWRCPENRIIFTLLWRYALLLGRRGAPESAFHVMRLVLSFDPPNDPLHILLLIDSLALRAKDFQWL 522 G+ M++ G F E EY + F +MD +I+ L + P+ +++ LQ+++ R + E A + A+ +LECA HP F S +S RL +R PENR F L+++ + L +RG P +A +L+LS DP NDPL +LLLID L+LRA+++ +L Sbjct: 52 GIAMQLVDTRRGVQHFTFEHHREYQQVQFKFLDAVESMDPNNIVLLLQMNPYHVDSLLQLSDVCRMQEDQEMARDLIERALYSLECAFHPVF-------SLTSGTCRLDYRRPENRAFFLALFKHLMFLEKRGCPRTALEFCKLILSLDPENDPLCVLLLIDFLSLRAREYTFL 218
BLAST of mRNA_M-pyrifera_M_contig87420.20316.1 vs. uniprot
Match: A0A7K7Q1E1_ACRAR (TCF25 factor (Fragment) n=1 Tax=Acrocephalus arundinaceus TaxID=39621 RepID=A0A7K7Q1E1_ACRAR) HSP 1 Score: 100 bits (248), Expect = 5.320e-22 Identity = 60/174 (34.48%), Postives = 96/174 (55.17%), Query Frame = 1 Query: 1 GLGMRMERKEGGSVEFVVEFGEEYASARKLFHSLAGAMDLESILHLARAKPWLLEAQLQVAEYARATGNAEDAFQTLSNAVATLECALHPSFLSAFTTPSSSSNPPRLPWRCPENRIIFTLLWRYALLLGRRGAPESAFHVMRLVLSFDPPNDPLHILLLIDSLALRAKDFQWL 522 G+ M++ G F E EY + F +MD +I+ L + P+ +++ LQ+++ R + E A + A+ +LECA HP F S +S RL +R PENR F L+++ + L +RG P +A +L+LS DP NDPL ++LLID L+LRA+++ +L Sbjct: 29 GITMQLLDTRRGVQHFTFEHHREYQQVQFKFLDAVESMDPNNIVLLLQMNPYHVDSLLQLSDVCRMQEDQEMARDLIERALYSLECAFHPVF-------SLTSGTCRLDYRRPENRAFFLALFKHLMFLEKRGCPRTALEFCKLILSLDPENDPLCVMLLIDFLSLRAREYSFL 195
BLAST of mRNA_M-pyrifera_M_contig87420.20316.1 vs. uniprot
Match: UPI0010A22DA0 (transcription factor 25 isoform X2 n=1 Tax=Macaca mulatta TaxID=9544 RepID=UPI0010A22DA0) HSP 1 Score: 102 bits (253), Expect = 5.830e-22 Identity = 62/175 (35.43%), Postives = 98/175 (56.00%), Query Frame = 1 Query: 1 GLGMRMERKEGGSVEFVVEFGEEYASARKLFHSLAGAMDLESILHLARAKPWLLEAQLQVAEYARATGNAEDAFQTLSNAVATLECALHPSFLSAFTTPSSSSNPPRLPWRCPENRIIFTLLWRYALLLGRRGAPESAFHVMRLVLSFDPPNDPLHILLLIDSLALRAKDFQWLL 525 GL MR+ G F E EEY A+ F +M+L +I+ L + P+ +++ LQ+++ R + E A + A+ ++ECA HP F S +S RL +R PENR + L++ L +RG P +A +L+LS +P DPL +LLLID LALRA+++++L+ Sbjct: 211 GLSMRLLESRKGLSFFAFEHSEEYQQAQHKFLVAVESMELNNIVVLLQTSPYHVDSLLQLSDACRFQEDQEMARDLVERALYSMECAFHPLF-------SLTSGACRLDYRRPENRSFYLALYKQMSFLEKRGCPRTALEYCKLILSLEPDEDPLCMLLLIDHLALRARNYEYLI 378
BLAST of mRNA_M-pyrifera_M_contig87420.20316.1 vs. uniprot
Match: UPI001890AC89 (LOW QUALITY PROTEIN: transcription factor 25 n=1 Tax=Talpa occidentalis TaxID=50954 RepID=UPI001890AC89) HSP 1 Score: 102 bits (253), Expect = 5.910e-22 Identity = 61/175 (34.86%), Postives = 98/175 (56.00%), Query Frame = 1 Query: 1 GLGMRMERKEGGSVEFVVEFGEEYASARKLFHSLAGAMDLESILHLARAKPWLLEAQLQVAEYARATGNAEDAFQTLSNAVATLECALHPSFLSAFTTPSSSSNPPRLPWRCPENRIIFTLLWRYALLLGRRGAPESAFHVMRLVLSFDPPNDPLHILLLIDSLALRAKDFQWLL 525 GL MR+ G F E EEY A+ F + +M+ +I+ L + P+ +++ LQ+++ R + E A + A+ ++ECA HP F S +S RL +R PENR + L++ L +RG P +A +L+LS +P DPL +LLL+D LALRA+D+++L+ Sbjct: 234 GLTMRLLEARKGLSSFAFEHSEEYQQAQHRFLAAVESMEPNNIVVLLQTSPYHVDSLLQLSDACRFQEDQEMARDLVERALYSMECAFHPLF-------SLTSGACRLDYRRPENRSFYLALYKQMSFLEKRGCPRTALEYCKLILSLEPDEDPLCMLLLVDHLALRARDYEYLI 401 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87420.20316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig87420.20316.1 >prot_M-pyrifera_M_contig87420.20316.1 ID=prot_M-pyrifera_M_contig87420.20316.1|Name=mRNA_M-pyrifera_M_contig87420.20316.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp MRMERKEGGSVEFVVEFGEEYASARKLFHSLAGAMDLESILHLARAKPWLback to top mRNA from alignment at M-pyrifera_M_contig87420:287..811+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig87420.20316.1 ID=mRNA_M-pyrifera_M_contig87420.20316.1|Name=mRNA_M-pyrifera_M_contig87420.20316.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig87420:287..811+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig87420:287..811+ >mRNA_M-pyrifera_M_contig87420.20316.1 ID=mRNA_M-pyrifera_M_contig87420.20316.1|Name=mRNA_M-pyrifera_M_contig87420.20316.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig87420:287..811+ (Macrocystis pyrifera P11B4 male)back to top |