mRNA_M-pyrifera_M_contig109761.2032.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109761.2032.1 vs. uniprot
Match: A0A3D5DHE5_9GAMM (CoA ester lyase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DHE5_9GAMM) HSP 1 Score: 201 bits (512), Expect = 2.560e-62 Identity = 104/127 (81.89%), Postives = 113/127 (88.98%), Query Frame = 1
Query: 1 DMAAELRVEPSWEALLYARSRLVHAAASAQIDLIDVPYLDLEDMAGLEREAALCAKLGMTGKGAIHPKQLAIIERHFSPGDAQIAHARHLTTAFEQADGGLLVVDGKLIEKPVLRSQYRILAIAERL 381
DMAAELRVEP+W ALLYAR+RLVHAAA AQIDLIDVPYLDL DM GLE+EA A +GMTGKGAIHPKQL IIERHFSP D QIAHA+ +T AFE+A+ GLLVVDGKLIEKPVLRSQYRILAIA+RL
Sbjct: 163 DMAAELRVEPTWTALLYARTRLVHAAAMAQIDLIDVPYLDLSDMDGLEQEAEASAGIGMTGKGAIHPKQLPIIERHFSPSDNQIAHAKRVTEAFEKANTGLLVVDGKLIEKPVLRSQYRILAIAKRL 289
BLAST of mRNA_M-pyrifera_M_contig109761.2032.1 vs. uniprot
Match: A0A7C7HPS4_9GAMM (CoA ester lyase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C7HPS4_9GAMM) HSP 1 Score: 191 bits (486), Expect = 2.450e-60 Identity = 99/127 (77.95%), Postives = 108/127 (85.04%), Query Frame = 1
Query: 1 DMAAELRVEPSWEALLYARSRLVHAAASAQIDLIDVPYLDLEDMAGLEREAALCAKLGMTGKGAIHPKQLAIIERHFSPGDAQIAHARHLTTAFEQADGGLLVVDGKLIEKPVLRSQYRILAIAERL 381
DM+AELRVEP+WE LLYARSRLVHAAASAQIDLIDVPYLDL DM GLE EAALCA+LGMTGKGAIHPKQL I RHF+P I AR +T+ FE A GL+VV+GKLIEKPVLRS YRILAIA+RL
Sbjct: 24 DMSAELRVEPTWEGLLYARSRLVHAAASAQIDLIDVPYLDLNDMPGLEIEAALCAQLGMTGKGAIHPKQLEPISRHFTPNIEAITRARKITSTFEAAGTGLVVVEGKLIEKPVLRSMYRILAIADRL 150
BLAST of mRNA_M-pyrifera_M_contig109761.2032.1 vs. uniprot
Match: A0A7C8D686_9GAMM (CoA ester lyase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7C8D686_9GAMM) HSP 1 Score: 190 bits (482), Expect = 6.570e-58 Identity = 98/127 (77.17%), Postives = 108/127 (85.04%), Query Frame = 1
Query: 1 DMAAELRVEPSWEALLYARSRLVHAAASAQIDLIDVPYLDLEDMAGLEREAALCAKLGMTGKGAIHPKQLAIIERHFSPGDAQIAHARHLTTAFEQADGGLLVVDGKLIEKPVLRSQYRILAIAERL 381
DM+AELRVEP+WEALLYARSRLVHAAASAQIDLIDVPYLDL DM GLE EA+LCA+LGMTGKGAIHP QL I RHF+P I AR +T+ FE A GL+VV+GKLIEKPVLRS YRILAIA+RL
Sbjct: 160 DMSAELRVEPTWEALLYARSRLVHAAASAQIDLIDVPYLDLNDMPGLEIEASLCAQLGMTGKGAIHPNQLEPINRHFTPNIEAITRARKITSTFEAAGTGLVVVEGKLIEKPVLRSMYRILAIADRL 286
BLAST of mRNA_M-pyrifera_M_contig109761.2032.1 vs. uniprot
Match: A0A437QQY0_9PROT (CoA ester lyase n=2 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A437QQY0_9PROT) HSP 1 Score: 185 bits (469), Expect = 5.870e-56 Identity = 96/131 (73.28%), Postives = 106/131 (80.92%), Query Frame = 1
Query: 1 DMAAELRVEPSWEALLYARSRLVHAAASAQIDLIDVPYLDLEDMAGLEREAALCAKLGMTGKGAIHPKQLAIIERHFSPGDAQIAHARHLTTAFEQADGGLLVVDGKLIEKPVLRSQYRILAIAERLRQRH 393
DMAA+LRVEPSWEALLYAR R VHAAA A +DLIDVPYLDL DM GL EA A +GMTGKGAIHPKQL IIE+ FSP + QIA+AR T AFEQAD GL+VVD KL+EKPVLRS YR+LAIAE L R+
Sbjct: 157 DMAADLRVEPSWEALLYARLRCVHAAAGAGVDLIDVPYLDLNDMDGLAEEAKRAAAIGMTGKGAIHPKQLPIIEKTFSPSEDQIAYARRATAAFEQADTGLVVVDNKLLEKPVLRSMYRVLAIAEVLEDRY 287
BLAST of mRNA_M-pyrifera_M_contig109761.2032.1 vs. uniprot
Match: A0A2E8YEK0_9GAMM (CoA ester lyase n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A2E8YEK0_9GAMM) HSP 1 Score: 180 bits (457), Expect = 3.500e-54 Identity = 91/128 (71.09%), Postives = 104/128 (81.25%), Query Frame = 1
Query: 1 DMAAELRVEPSWEALLYARSRLVHAAASAQIDLIDVPYLDLEDMAGLEREAALCAKLGMTGKGAIHPKQLAIIERHFSPGDAQIAHARHLTTAFEQADGGLLVVDGKLIEKPVLRSQYRILAIAERLR 384
DMAAELRVEP W+ALLYARSR+VHAAA A +D IDVP+LDL DM GLEREA+ C KLG+TGK AIHPKQ+ +I + F+P I AR +TT FEQ D GL+V+D KLIEKPVLRS YRILAIAERLR
Sbjct: 157 DMAAELRVEPIWDALLYARSRVVHAAAGAGLDFIDVPFLDLSDMDGLEREASACRKLGITGKAAIHPKQIPVINKIFTPTSEDIDLARRITTEFEQGDSGLVVIDNKLIEKPVLRSMYRILAIAERLR 284
BLAST of mRNA_M-pyrifera_M_contig109761.2032.1 vs. uniprot
Match: A0A352VRD3_9BACT (CoA ester lyase n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A352VRD3_9BACT) HSP 1 Score: 171 bits (434), Expect = 1.220e-50 Identity = 85/127 (66.93%), Postives = 102/127 (80.31%), Query Frame = 1
Query: 1 DMAAELRVEPSWEALLYARSRLVHAAASAQIDLIDVPYLDLEDMAGLEREAALCAKLGMTGKGAIHPKQLAIIERHFSPGDAQIAHARHLTTAFEQADGGLLVVDGKLIEKPVLRSQYRILAIAERL 381
DMAAELR + +WE LLYARSR+VHAAASA ID IDVPYLDL D+ G+ REA L A LG GKGAIHPKQ+A++ FSPG+A +AHAR + AF +AD GL+VVDGKLIE+PVLR R+LA+AER+
Sbjct: 160 DMAAELRCKNAWEPLLYARSRVVHAAASAGIDAIDVPYLDLNDLEGMRREAELAADLGFCGKGAIHPKQIAVLNEVFSPGEAAVAHARRILNAFAEADTGLVVVDGKLIERPVLREMTRLLAVAERV 286
BLAST of mRNA_M-pyrifera_M_contig109761.2032.1 vs. uniprot
Match: A0A2E4SKF5_9GAMM (CoA ester lyase (Fragment) n=1 Tax=Acidiferrobacteraceae bacterium TaxID=2024893 RepID=A0A2E4SKF5_9GAMM) HSP 1 Score: 166 bits (420), Expect = 1.310e-50 Identity = 84/127 (66.14%), Postives = 101/127 (79.53%), Query Frame = 1
Query: 1 DMAAELRVEPSWEALLYARSRLVHAAASAQIDLIDVPYLDLEDMAGLEREAALCAKLGMTGKGAIHPKQLAIIERHFSPGDAQIAHARHLTTAFEQADGGLLVVDGKLIEKPVLRSQYRILAIAERL 381
DMAAELR +WE LLYARSR+VHAAASA ID IDVPYLDLED+ G+ REA L +LG +GKG+IHPKQ+ I+ F+P +++IAHAR + AF +AD GL+VVDGKLIEKPVLR RIL+I ERL
Sbjct: 2 DMAAELRCSNAWEPLLYARSRVVHAAASAGIDAIDVPYLDLEDLDGMAREATLARELGFSGKGSIHPKQIPILNDVFTPSESEIAHARRILDAFAKADTGLVVVDGKLIEKPVLRDMQRILSIVERL 128
BLAST of mRNA_M-pyrifera_M_contig109761.2032.1 vs. uniprot
Match: A0A383AH38_9ZZZZ (HpcH_HpaI domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A383AH38_9ZZZZ) HSP 1 Score: 166 bits (419), Expect = 2.570e-49 Identity = 81/127 (63.78%), Postives = 104/127 (81.89%), Query Frame = 1
Query: 1 DMAAELRVEPSWEALLYARSRLVHAAASAQIDLIDVPYLDLEDMAGLEREAALCAKLGMTGKGAIHPKQLAIIERHFSPGDAQIAHARHLTTAFEQADGGLLVVDGKLIEKPVLRSQYRILAIAERL 381
DMAAELR +WE LLYARSR+VHAAA+A ID+IDVPYLDL D+ G+EREA L +LG +GKGAIHPKQ+ I+ + F+P +++IAHA+ + AFE AD GL+VVDGKLIE+PV+R RIL+IA+R+
Sbjct: 87 DMAAELRCRNAWEPLLYARSRVVHAAAAAGIDVIDVPYLDLNDLTGMEREACLARELGFSGKGAIHPKQIPILNQVFTPSESEIAHAQKILRAFEAADTGLVVVDGKLIEQPVIREMRRILSIADRI 213
BLAST of mRNA_M-pyrifera_M_contig109761.2032.1 vs. uniprot
Match: A0A2S6R3V3_9PROT (L-malyl-CoA/beta-methylmalyl-CoA lyase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha10_Bin2 TaxID=2013104 RepID=A0A2S6R3V3_9PROT) HSP 1 Score: 164 bits (415), Expect = 1.100e-48 Identity = 84/130 (64.62%), Postives = 100/130 (76.92%), Query Frame = 1
Query: 1 DMAAELRVEPSWEALLYARSRLVHAAASAQIDLIDVPYLDLEDMAGLEREAALCAKLGMTGKGAIHPKQLAIIERHFSPGDAQIAHARHLTTAFEQADGGLLVVDGKLIEKPVLRSQYRILAIAERLRQR 390
DMAAELRV P WE L ARS+LVHAAA A +DLIDVP+LDLED+ GL EA A LG TGKGAIHPKQ+A + FSP +A+I +AR + AFE+ D GL+++D KLIEKPVLRS YRILAIAE ++R
Sbjct: 87 DMAAELRVAPVWEPLFRARSQLVHAAAGAGVDLIDVPFLDLEDIDGLREEAERSAALGFTGKGAIHPKQIATLNEAFSPSEAEIDYARRVIQAFEEGDSGLVLIDNKLIEKPVLRSMYRILAIAEAAQKR 216
BLAST of mRNA_M-pyrifera_M_contig109761.2032.1 vs. uniprot
Match: A0A8G2BM76_9PROT ((S)-citramalyl-CoA lyase n=2 Tax=Thalassobaculum TaxID=526215 RepID=A0A8G2BM76_9PROT) HSP 1 Score: 166 bits (420), Expect = 1.160e-48 Identity = 81/124 (65.32%), Postives = 98/124 (79.03%), Query Frame = 1
Query: 1 DMAAELRVEPSWEALLYARSRLVHAAASAQIDLIDVPYLDLEDMAGLEREAALCAKLGMTGKGAIHPKQLAIIERHFSPGDAQIAHARHLTTAFEQADGGLLVVDGKLIEKPVLRSQYRILAIA 372
DMAA+LR E +WEALLYARSR+VHAAA A +D+IDVP+LDL DM G+ REA LG GKG+IHPKQ+ ++ FSP +A+IAHAR + AFEQ D GL+V+DGKLIEKPVLRS YR+LA A
Sbjct: 155 DMAADLRCEYTWEALLYARSRVVHAAAGAGVDVIDVPFLDLNDMDGMRREAEAARALGFCGKGSIHPKQVPVLNEIFSPSEAEIAHARRIVDAFEQGDSGLVVIDGKLIEKPVLRSMYRVLARA 278 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109761.2032.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109761.2032.1 >prot_M-pyrifera_M_contig109761.2032.1 ID=prot_M-pyrifera_M_contig109761.2032.1|Name=mRNA_M-pyrifera_M_contig109761.2032.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=134bp MAAELRVEPSWEALLYARSRLVHAAASAQIDLIDVPYLDLEDMAGLEREAback to top mRNA from alignment at M-pyrifera_M_contig109761:3..407+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109761.2032.1 ID=mRNA_M-pyrifera_M_contig109761.2032.1|Name=mRNA_M-pyrifera_M_contig109761.2032.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=405bp|location=Sequence derived from alignment at M-pyrifera_M_contig109761:3..407+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109761:3..407+ >mRNA_M-pyrifera_M_contig109761.2032.1 ID=mRNA_M-pyrifera_M_contig109761.2032.1|Name=mRNA_M-pyrifera_M_contig109761.2032.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=804bp|location=Sequence derived from alignment at M-pyrifera_M_contig109761:3..407+ (Macrocystis pyrifera P11B4 male)back to top |