prot_M-pyrifera_M_contig87366.20303.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig87366.20303.1
Unique Nameprot_M-pyrifera_M_contig87366.20303.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length72
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87366.20303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 1..72
e-value: 2.5E-14
score: 55.0
IPR018488Cyclic nucleotide-binding, conserved sitePROSITEPS00888CNMP_BINDING_1coord: 55..71
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 28..72
score: 10.312
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 3..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87366contigM-pyrifera_M_contig87366:320..535 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87366.20303.1mRNA_M-pyrifera_M_contig87366.20303.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig87366 320..535 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig87366.20303.1 ID=prot_M-pyrifera_M_contig87366.20303.1|Name=mRNA_M-pyrifera_M_contig87366.20303.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=72bp
IAILVKPPSARTSDDLATLNRLLSRLAFLRQLPPESQEAIGRRLQYRRAR
TGQLIIAEGDDANEFFVLLSGI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR018488cNMP-bd_CS
IPR000595cNMP-bd_dom
IPR018490cNMP-bd-like