mRNA_M-pyrifera_M_contig87299.20289.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig87299.20289.1 vs. uniprot
Match: A0A5A8ECB5_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8ECB5_CAFRO) HSP 1 Score: 138 bits (347), Expect = 1.980e-34 Identity = 84/202 (41.58%), Postives = 114/202 (56.44%), Query Frame = 1 Query: 10 FARVNACQLSLSYYVAFSLIMARRYDDAARVLSRVLLFNQRRLRLLTDASDASPFARRTAERMLCLLAVCILLSPGAPVDDQVRRKVNHDFGTQISTVLA---RSMSTLQNLFVMAAPSFIAPAFPPRVP-----DAAARVHTQQVALFLDDAVLRTKRSPAVRSYLRLYSKVDIRKLSVFSGTSESAMHALLVVLKQSSWQ 591 F RV QLSL Y+ FSL M R+ DAAR +S VLL R +L D + +S F ++TAE+ML LLA+C LSPGAPVD+ VR K FG +++ + A + + + +LF A PSF+ ++PP P A +V Q +FL A R +RS LRLY +D+ KL+ +G +E A LV LK SWQ Sbjct: 279 FLRVTRAQLSLYSYLGFSLAMLGRFHDAARAISSVLLLVHRASPVLEDGARSSRFMKKTAEKMLALLALCDALSPGAPVDELVRAKATDRFGAKLTGIAAGGTEAEAAIADLFTAATPSFVDASWPPVAPAAEGASAGEQVFAVQSRIFLSAAQARAAELAGIRSLLRLYKTIDVPKLARLAGVTEDRARAGLVALKLHSWQ 480
BLAST of mRNA_M-pyrifera_M_contig87299.20289.1 vs. uniprot
Match: A0A813A9X5_9DINO (Eif3l protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A9X5_9DINO) HSP 1 Score: 130 bits (328), Expect = 1.110e-31 Identity = 79/209 (37.80%), Postives = 119/209 (56.94%), Query Frame = 1 Query: 1 EAPFARVNACQLSLSYYVAFSLIMARRYDDAARVLSRVLLFNQRRLRLLTDASDASPFARRTAERMLCLLAVCILLSPGAPV-DDQVRRKVNHDFGTQISTV-----------LARSMSTLQNLFVMAAPSFIAPAFPPRVPDAAARVHTQQVALFLDDAVLRTKRSPAVRSYLRLYSKVDIRKLSVFSGTSESAMHALLVVLKQSSWQ 591 +A FARV C +SL YY F+L+MARRY DAA VLSR+LLF R L + A+ S F ++ A++++ L+AV + PG V D+ V + +G ++ + +A + + L+ LF AAP FI AF P A+ V +Q+ +F +A+ R +RS+LRLY+ +D+ K+S F G S +H +LV LK +WQ Sbjct: 310 DALFARVQKCHISLYYYFGFALLMARRYSDAAAVLSRILLFFDRTEHLFSAAASTSRFVQKQADKIMALVAVPLATCPGLNVVDEVVATRTRAKYGEKMQAITDMGEADDEQRVAAATAALEELFDFAAPGFIDGAFRIDQPGDASIVAARQLNMFKREALQRAMGLEKLRSFLRLYTTIDVSKVSTFLGVSTGKVHDMLVELKVKNWQ 518
BLAST of mRNA_M-pyrifera_M_contig87299.20289.1 vs. uniprot
Match: R7TIX8_CAPTE (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TIX8_CAPTE) HSP 1 Score: 110 bits (274), Expect = 2.680e-24 Identity = 71/220 (32.27%), Postives = 113/220 (51.36%), Query Frame = 1 Query: 10 FARVNACQLSLSYYVAFSLIMARRYDDAARVLSRVLLFNQRRLRLLTDASDASPFARRTAERMLCLLAVCILLSPGAPVDDQVRRKVNHDFGTQISTVLARSMSTLQNLFVMAAPSFIAPAFPPRVPDAAARVH----TQQVALFLDDAVLRTKRSPAVRSYLRLYSKVDIRKLSVFSGTSESAMHALLVVLKQSSWQRQGGADRPAGPGEFGSADSTHF 657 ++RV ACQ++ YYV+F+ +M RRY DA R LS +LL+ QR ++ + + + E+M LLA+C++L P +D+ V +++ F ++ + M+ + F A P F++P PP A A H Q+ +FLD+ V + + P +RSYL+LY+ + I KL+VF SE + L+ K GEF SA F Sbjct: 290 YSRVPACQITTFYYVSFAYMMMRRYQDAIRTLSNILLYIQRTKQMFQNKASLYDQINKQNEQMYTLLAICLVLHP-MRIDESVHQQLREKFADKMLRMQKGEMAEFETCFSFACPKFLSPV-PPNYEAAPANFHKIPFNNQLKVFLDE-VYQQQLLPTIRSYLKLYTTLPISKLAVFMDMSEDELRCHLMCFKHKLKNLVWTKGTSGLEGEFQSASEVDF 506
BLAST of mRNA_M-pyrifera_M_contig87299.20289.1 vs. uniprot
Match: R7QLU4_CHOCR (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLU4_CHOCR) HSP 1 Score: 107 bits (266), Expect = 3.180e-23 Identity = 71/221 (32.13%), Postives = 109/221 (49.32%), Query Frame = 1 Query: 1 EAPFARVNACQLSLSYYVAFSLIMARRYDDAARVLSRVLLFNQRRLRLLTDASDASPFARRTAERMLCLLAVCILLSPGAPVDDQVRRKVNHDFGTQISTVLARSMSTLQNLFVMAAPSFIAPAFPPR--VPDAAARVHTQQVALFLDDAVLRTKRSPAVRSYLRLYSKVDIRKLSVFSGTSESAMHALLVVLKQSSWQRQGGADRPAGPGEFGSADSTHF 657 A F V AC +S+ YY+ F IM RRY+DAAR+ S +L R T + +R ++M+ LLA+C+ L P VD+ + V G +++ + ++LF+ A+P FI PA P + D Q LF+++ V P +RSYL+LY+K++I KL+ ES + + L LK SW G P GE+ ++ F Sbjct: 270 SALFTHVTACHVSIYYYMGFCYIMLRRYEDAARIFSSTVLHIGRIKHNHTRSYQYEQINKRN-DQMMALLALCLTLQP-LQVDESMMSMVREKAGDRLARLRQGEPHAFEDLFIYASPKFICPAAPDYDVIDDTNMEAPRLQTKLFMEE-VKSQLLLPEIRSYLKLYTKIEIEKLAALMDVDESTLRSHLHALKHKSWTMTGSFHGPPLQGEWKTSSDVGF 487
BLAST of mRNA_M-pyrifera_M_contig87299.20289.1 vs. uniprot
Match: A0A8J1Y6T7_OWEFU (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1Y6T7_OWEFU) HSP 1 Score: 105 bits (263), Expect = 8.260e-23 Identity = 71/220 (32.27%), Postives = 108/220 (49.09%), Query Frame = 1 Query: 10 FARVNACQLSLSYYVAFSLIMARRYDDAARVLSRVLLFNQRRLRLLTDASDASPFARRTAERMLCLLAVCILLSPGAPVDDQVRRKVNHDFGTQISTVLARSMSTLQNLFVMAAPSFIAPAFPPRVPDAAARVHTQQVAL----FLDDAVLRTKRSPAVRSYLRLYSKVDIRKLSVFSGTSESAMHALLVVLKQSSWQRQGGADRPAGPGEFGSADSTHF 657 ++RV ACQ++ YYV F+ +M RRY DA R LS +LL+ QR ++ + + + E+M LLA+C+ L P +D+ V ++ FG ++ + M+ +N F A P F++P PP H + AL FLD+ V + VRSYL+LY+ + I KL+ F T+E + L+ K GEF SA F Sbjct: 287 YSRVPACQITTFYYVGFAYMMMRRYQDAIRTLSNILLYIQRTKQMFQNKVNLYDQINKQNEQMYTLLAICLTLHP-MRIDESVHSQLREKFGDRMLRMQKGEMAEFENSFAYACPKFLSPV-PPNYEAGQTNYHKEPYALQLKVFLDE-VAQQSLLTTVRSYLKLYTTLPISKLAAFMDTTEDELRTHLMCFKHKMKNIVWTQGTSGLKGEFQSASEVDF 503
BLAST of mRNA_M-pyrifera_M_contig87299.20289.1 vs. uniprot
Match: A0A261Y4V3_9FUNG (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y4V3_9FUNG) HSP 1 Score: 105 bits (262), Expect = 1.560e-22 Identity = 68/204 (33.33%), Postives = 113/204 (55.39%), Query Frame = 1 Query: 1 EAPFARVNACQLSLSYYVAFSLIMARRYDDAARVLSRVLLFNQRRLRLLTDASDASPFARRTAERMLCLLAVCILLSPGAPVDDQVRRKVNHDFGTQISTV---LARSMSTLQNLFVMAAPSFIAPAFPPRVPDAAARVHTQQ--VALFLDDAVLRTKRSPAVRSYLRLYSKVDIRKLSVFSGTSESAMHALLVVLKQSSWQRQ 597 +A FARV AC ++ YYV F+ +M RRY DA + S +L+F QR + T + A++ A++M LLA+CI L P +D+ + + +G Q++ + S ST ++LF+ A P FI+ A P D+ + Q +FL+D V +T P +RS+L+LY+ + + KL+ F + + L++ KQ+S Q + Sbjct: 275 KALFARVTACHVTTYYYVGFAYMMMRRYADAIKAFSHILVFIQRTKQYHTRSYQYDQIAKK-ADQMYALLAICIALCP-TRLDENIHTLLREKYGEQLARIQKGTPESHSTFEDLFLYACPKFIS-ANGPNYDDSVQPIEPQHHHATIFLND-VKQTTHVPTLRSFLKLYTSMGVDKLAAFLDMQPEELASQLIIFKQASRQER 474
BLAST of mRNA_M-pyrifera_M_contig87299.20289.1 vs. uniprot
Match: UPI0004416AB0 (eukaryotic translation initiation factor 3 subunit 6 n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI0004416AB0) HSP 1 Score: 103 bits (256), Expect = 8.460e-22 Identity = 74/207 (35.75%), Postives = 103/207 (49.76%), Query Frame = 1 Query: 1 EAPFARVNACQLSLSYYVAFSLIMARRYDDAARVLSRVLLFNQRRLRLLTDASDASPFARRTAERMLCLLAVCILLSPGAPVDDQVRRKVNHDFGTQISTVLA--RSMSTLQNLFVMAAPSFIAPAFPPR----------VPDAAARVHTQQVALFLDDAVLRTKRSPAVRSYLRLYSKVDIRKLSVFSGTSESAMHALLVVLKQSS 585 ++PF RV AC ++ YYV F IM RRY DA R +L FN R +R S +TA+RM L AVC LSP +DD + +G Q + + + + LF+ A P FI+ A PP V D + +A FL D ++ P +RS+L+LY+ +D RKLS F T E M ++VLKQ+S Sbjct: 305 KSPFTRVTACHVTTYYYVGFCYIMLRRYPDAIRTFVSILNFNMR-MRQYHTRSYQYDQINKTADRMYALFAVCNALSPSR-LDDNIANIAKERYGEQFAKMSRGEEGLPAFEELFLYACPKFIS-ANPPAYEDPDALQAYVDDPPPEPAQRHLASFLADVKVQAT-VPTLRSFLKLYTSIDARKLSSFLDTDEEEMVQQMMVLKQAS 507
BLAST of mRNA_M-pyrifera_M_contig87299.20289.1 vs. uniprot
Match: A0A8K0KN81_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KN81_LADFU) HSP 1 Score: 102 bits (254), Expect = 1.290e-21 Identity = 62/189 (32.80%), Postives = 107/189 (56.61%), Query Frame = 1 Query: 1 EAPFARVNACQLSLSYYVAFSLIMARRYDDAARVLSRVLLFNQRRLRLLTDASDASPFARRTAERMLCLLAVCILLSPGAPVDDQVRRKVNHD-FGTQISTVLARSMSTLQNLFVMAAPSFIAPAFPPRVPDAAARVHTQ-----QVALFLDDAVLRTKRSPAVRSYLRLYSKVDIRKLSVFSGTSESA 549 + ++ V ACQ+++SYYV F+ +M RRY DA R LS +LL+ QR +L T S + + ++M LL +C++L P VD+ +++ + F ++ + + +N F+ A P F++PA PP PDAA ++ Q +F+D+ V + P +RSYL+LY+ + + KL+VF + + Sbjct: 254 KTQYSHVPACQITMSYYVGFAYMMMRRYSDAIRTLSSILLYVQRTKQLFTTRSYQNDQINKQTDQMYTLLCMCLVLHPQC-VDESIQQALREKGFHEKMYKMQYGDLPEFENCFLFACPKFLSPAPPP--PDAAPEDFSKDATKHQCQVFMDE-VRQQNMLPIIRSYLKLYTTLPVSKLAVFMSQGQKS 438
BLAST of mRNA_M-pyrifera_M_contig87299.20289.1 vs. uniprot
Match: A0A1Y1XV61_9FUNG (Eukaryotic translation initiation factor 3 subunit L n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XV61_9FUNG) HSP 1 Score: 102 bits (253), Expect = 1.860e-21 Identity = 66/203 (32.51%), Postives = 108/203 (53.20%), Query Frame = 1 Query: 1 EAPFARVNACQLSLSYYVAFSLIMARRYDDAARVLSRVLLFNQRRLRLLTDASDASPFARRTAERMLCLLAVCILLSPGAPVDDQVRRKVNHDFGTQISTVLARS--MSTLQNLFVMAAPSFIAPAFP--PRVPDAAARVHTQQVALFLDDAVLRTKRSPAVRSYLRLYSKVDIRKLSVFSGTSESAMHALLVVLKQSSWQRQ 597 +A FARV AC ++ YYV F+ +M RRY DA + S +L+F R +R + S + ++M LLAVC+ LSP +D+ + + +G Q+S + + T+++LF+ A P FI+P P + + T Q +F+ + V + P +RSYL+LY+ + I KL+ F + L++ KQ S QR+ Sbjct: 286 KALFARVTACHVTTYYYVGFAYMMMRRYADAIKTFSHILVFITR-IRQVHSKSYQFDQINKKGDQMYALLAVCVALSP-TRLDESIHTHMREKYGEQLSKIQRGEDPIQTIEDLFLYACPKFISPMSPNYDDLENNPPEPSTYQAKIFMSE-VRKQILIPTLRSYLKLYTTMSIEKLAAFLEVDPEELRTQLMIFKQKSRQRK 485
BLAST of mRNA_M-pyrifera_M_contig87299.20289.1 vs. uniprot
Match: A0A433QD73_9FUNG (Eukaryotic translation initiation factor 3 subunit L n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QD73_9FUNG) HSP 1 Score: 102 bits (253), Expect = 1.920e-21 Identity = 69/203 (33.99%), Postives = 106/203 (52.22%), Query Frame = 1 Query: 1 EAPFARVNACQLSLSYYVAFSLIMARRYDDAARVLSRVLLFNQRRLRLLTDASDASPFARRTAERMLCLLAVCILLSPGAPVDDQVRRKVNHDFGTQISTVLA--RSMSTLQNLFVMAAPSFIAPAFP----PRVPDAAARVHTQQVALFLDDAVLRTKRSPAVRSYLRLYSKVDIRKLSVFSGTSESAMHALLVVLKQSSWQ 591 +A FARV AC ++ YYV F+ +M RRY DA + S +L+F QR + T + A++ ++M LLAVCI L P +D+ + + +G Q+S + + T ++LF+ A P FI P P P + + H +FL+D V P +RS+L+LY+ + I KL+ F + L+VLKQ S Q Sbjct: 296 KALFARVTACHVTTFYYVGFAYMMMRRYADAIKAFSHILVFIQRTKQYHTRSYQYDQIAKK-GDQMYALLAVCIALCP-TRLDETIHTHLREKYGEQLSKMQKGEEGIPTFEDLFLYACPKFILPNGPNFEDPNAANLNSEPHIHHSKIFLND-VRHQITIPTLRSFLKLYTTMGIDKLAAFLELEPEELRTQLLVLKQKSRQ 495 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87299.20289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig87299.20289.1 >prot_M-pyrifera_M_contig87299.20289.1 ID=prot_M-pyrifera_M_contig87299.20289.1|Name=mRNA_M-pyrifera_M_contig87299.20289.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=219bp EAPFARVNACQLSLSYYVAFSLIMARRYDDAARVLSRVLLFNQRRLRLLTback to top mRNA from alignment at M-pyrifera_M_contig87299:17..832+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig87299.20289.1 ID=mRNA_M-pyrifera_M_contig87299.20289.1|Name=mRNA_M-pyrifera_M_contig87299.20289.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=816bp|location=Sequence derived from alignment at M-pyrifera_M_contig87299:17..832+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig87299:17..832+ >mRNA_M-pyrifera_M_contig87299.20289.1 ID=mRNA_M-pyrifera_M_contig87299.20289.1|Name=mRNA_M-pyrifera_M_contig87299.20289.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1314bp|location=Sequence derived from alignment at M-pyrifera_M_contig87299:17..832+ (Macrocystis pyrifera P11B4 male)back to top |