prot_M-pyrifera_M_contig87282.20284.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig87282.20284.1
Unique Nameprot_M-pyrifera_M_contig87282.20284.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length238
Homology
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BLAST of mRNA_M-pyrifera_M_contig87282.20284.1 vs. uniprot
Match: A0A1G5V1L3_9EURY (Polymorphic outer membrane protein repeat-containing protein n=1 Tax=Methanobrevibacter millerae TaxID=230361 RepID=A0A1G5V1L3_9EURY)

HSP 1 Score: 66.6 bits (161), Expect = 5.920e-9
Identity = 79/254 (31.10%), Postives = 121/254 (47.64%), Query Frame = 0 
Query:   16 NVSFSSNRFYGILDLGGGAIL---SEDTNVTVSACDFRNNTAPI-GGAIHFSSTFDDVASF-LTVDHSTFHLNTVEGVIQSDLQSVGAGLFAESGTSELHVSISSSSFVNNTADQSGGGVWAFSLSSASTLELVDTEFSWNSAYVGAGVMSFLP---TNVTGCSFEDNAAFQGAGLMLN-------------------------SGLSSVLNTNFTSNSAVDSAGALETTSNAVVVVADSLFSDNSASNFGGSV 236
            N +F SN        GGGA+     ED+ VT++   FRNNTA + GGAI  +S  +    + + +++ TF  N+V     +D+   G G    +    + V+I+SS FVNN+A  S GG    S+  +  L + D+EF  N A  G G + F       +    FE+N A    G + +                         SG+SS+ N NF SN+AVD          + + V++SLF++N+A+N GG+V
Sbjct:  152 NCTFDSNSVSST-STGGGAVYIKSREDSLVTIADSIFRNNTANVFGGAIQIASPTNYQHGYDVNIENCTFADNSVS----TDVNERGGGAIIIN--KYVRVNITSSKFVNNSAPTSEGG----SIRYSGPLTIRDSEFYSNHAIHG-GALCFGQGELLKIYNSVFENNYATSEGGAIKSRDYEMENVNFXXXXXXXXXXXXLSRSGVSSLTNANFDSNTAVDGGAVYLHRDLSRLTVSNSLFTNNNATNNGGAV 393
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87282.20284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1G5V1L3_9EURY5.920e-931.10Polymorphic outer membrane protein repeat-containi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR19862FAMILY NOT NAMEDcoord: 10..63
coord: 97..235
NoneNo IPR availablePANTHERPTHR19862:SF14WD REPEAT-CONTAINING PROTEIN 48coord: 10..63
coord: 97..235
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 4..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87282contigM-pyrifera_M_contig87282:89..802 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87282.20284.1mRNA_M-pyrifera_M_contig87282.20284.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig87282 89..802 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig87282.20284.1 ID=prot_M-pyrifera_M_contig87282.20284.1|Name=mRNA_M-pyrifera_M_contig87282.20284.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=238bp
SDRAVTVDHSELVLDNVSFSSNRFYGILDLGGGAILSEDTNVTVSACDFR
NNTAPIGGAIHFSSTFDDVASFLTVDHSTFHLNTVEGVIQSDLQSVGAGL
FAESGTSELHVSISSSSFVNNTADQSGGGVWAFSLSSASTLELVDTEFSW
NSAYVGAGVMSFLPTNVTGCSFEDNAAFQGAGLMLNSGLSSVLNTNFTSN
SAVDSAGALETTSNAVVVVADSLFSDNSASNFGGSVLI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence