prot_M-pyrifera_M_contig8720.20276.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8720.20276.1
Unique Nameprot_M-pyrifera_M_contig8720.20276.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length118
Homology
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A126WXS3_9PHAE (Putative LOV domain-containing protein n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A126WXS3_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 1.550e-73
Identity = 100/117 (85.47%), Postives = 110/117 (94.02%), Query Frame = 0
Query:    1 VEDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLHA 117
            + DNPIIFCSDGFA FTGY+KEEVEGRNCRFLQGAKTDPGD++KIR+AV EKREACLCLLNYKKDGSTF+NQFFLTPLFDA G LAYFLGIQVQV++ + GQEP+NPGWVYTMGLHA
Sbjct:   51 LHDNPIIFCSDGFASFTGYDKEEVEGRNCRFLQGAKTDPGDVAKIRSAVSEKREACLCLLNYKKDGSTFNNQFFLTPLFDAEGTLAYFLGIQVQVKTGDKGQEPENPGWVYTMGLHA 167          
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A126WVC6_9PHAE (Putative LOV domain-containing protein n=2 Tax=Ectocarpales TaxID=2877 RepID=A0A126WVC6_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 1.870e-72
Identity = 99/117 (84.62%), Postives = 107/117 (91.45%), Query Frame = 0
Query:    1 VEDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLHA 117
            +EDNPIIFCSDGFA FTGY KEEVEGRNCRFLQGAKTDPGD++KIR AV EK+EACLCLLNYKKDGSTFHNQFFLTP+FDA G LAYFLGIQVQV++   GQEP NPGW+YTMGLHA
Sbjct:   52 LEDNPIIFCSDGFADFTGYAKEEVEGRNCRFLQGAKTDPGDVTKIREAVTEKKEACLCLLNYKKDGSTFHNQFFLTPMFDAEGTLAYFLGIQVQVKTAAPGQEPANPGWIYTMGLHA 168          
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A126X2E3_9PHAE (Putative LOV domain-containing protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A126X2E3_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 2.410e-72
Identity = 99/117 (84.62%), Postives = 108/117 (92.31%), Query Frame = 0
Query:    1 VEDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLHA 117
            +EDNPIIFCSDGFA FTGY K+EVEGRNCRFLQGAKTDPGDI+KIR AV+EK+EACLCLLNYKKDGS FHNQFFLTPLFDA G LAY+LGIQVQV++   GQEP+NPGWVYTMGLHA
Sbjct:   49 LEDNPIIFCSDGFAEFTGYAKDEVEGRNCRFLQGAKTDPGDITKIREAVKEKKEACLCLLNYKKDGSIFHNQFFLTPLFDAEGKLAYYLGIQVQVKTGADGQEPENPGWVYTMGLHA 165          
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A6H5L122_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L122_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 4.850e-72
Identity = 98/117 (83.76%), Postives = 106/117 (90.60%), Query Frame = 0
Query:    1 VEDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLHA 117
            +EDNPIIFCSDGFA FTGY KEEVEGRNCRFLQGAKTDPGD +KIR A++E +EACLCLLNYKKDGSTFHNQFFLTPLFD  G LAYFLGIQVQV++   GQEP+NPGWVYTMGLHA
Sbjct:   49 LEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDTAKIREAIKENKEACLCLLNYKKDGSTFHNQFFLTPLFDEGGTLAYFLGIQVQVKTASDGQEPENPGWVYTMGLHA 165          
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A126WZ19_SARFS (Putative LOV domain-containing protein n=6 Tax=Sargassum TaxID=3015 RepID=A0A126WZ19_SARFS)

HSP 1 Score: 179 bits (453), Expect = 2.110e-55
Identity = 80/114 (70.18%), Postives = 97/114 (85.09%), Query Frame = 0
Query:    3 DNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEP-QNPGWVYTMGL 115
            DNPIIFCSDGF+   GY +EEVEGRNCRFLQGAKTDPGDI++IR A++E +EACLCL+NYKKDGS F+NQF+L PLFDA G LAYFLGIQV+V + +  Q+P +N GW++TM L
Sbjct:   53 DNPIIFCSDGFSELVGYTREEVEGRNCRFLQGAKTDPGDIAEIRDAIKENKEACLCLINYKKDGSAFNNQFYLVPLFDAGGQLAYFLGIQVEVETLDDEQQPPKNLGWLHTMCL 166          
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A835ZDN1_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDN1_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.370e-48
Identity = 71/118 (60.17%), Postives = 92/118 (77.97%), Query Frame = 0
Query:    1 VEDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDAS-GNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLHA 117
            +EDNPI+F S+GF+R+TGY K E+EGRNCRFLQG +T+P D+  IRAA+  + +A +CLLNY+KDG+ F NQFF+ PL DA+ G +AY+LG+Q  VR  E GQ  +N GWVY MGLHA
Sbjct:   60 LEDNPIVFSSEGFSRYTGYAKSEIEGRNCRFLQGKETNPADVETIRAAIGAQTDANVCLLNYRKDGTAFLNQFFICPLHDAATGAVAYYLGVQAAVRQKEGGQTQKNAGWVYQMGLHA 177          
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A6U0JAP0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JAP0_9STRA)

HSP 1 Score: 157 bits (396), Expect = 4.130e-46
Identity = 66/116 (56.90%), Postives = 87/116 (75.00%), Query Frame = 0
Query:    2 EDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLHA 117
            ED PI+F SDGF  FTGY   E+EGRNCRFLQG  T+  D+ KIR+A++ ++E  + LLNYKKDG++F+N+FFL+PL++  G LAY++G+Q  V+    GQ P NPGWVY  GLHA
Sbjct:  101 EDCPIVFASDGFCNFTGYAVSEIEGRNCRFLQGPGTEKADVDKIRSAIKSEKEESVNLLNYKKDGTSFNNEFFLSPLYEEDGKLAYYIGVQCSVKKLGPGQAPANPGWVYAQGLHA 216          
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A126WWA7_9STRA (Putative LOV domain-containing protein n=1 Tax=Synura petersenii TaxID=52555 RepID=A0A126WWA7_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.100e-45
Identity = 67/116 (57.76%), Postives = 87/116 (75.00%), Query Frame = 0
Query:    1 VEDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLH 116
            ++DNPI+F S+GF ++TGYEK E+EGRNCRFLQGA TDP DIS IR A+ ++ +  +C+ NY K+G  F NQFF+ PL D +  LAYFLG+QV V     GQ+ +NPGW+YTMG H
Sbjct:   84 LDDNPIVFTSEGFCKYTGYEKNEIEGRNCRFLQGAGTDPKDISLIRDAIRKEIDVNVCIQNYCKNGKPFMNQFFMCPLRDENKKLAYFLGVQVVVPKKAPGQQQENPGWIYTMGNH 199          
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A7S4J4U8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4U8_9STRA)

HSP 1 Score: 151 bits (381), Expect = 2.680e-44
Identity = 65/117 (55.56%), Postives = 86/117 (73.50%), Query Frame = 0
Query:    1 VEDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLHA 117
            ++D PIIF SDGF  FTGY  EE+EG+NCRFLQG +T   D+ +IR A++E++E C+ LLNY+KDGS+F N+FF++PL D +  LAYF+G+Q  V     GQ P N GWVY+ G HA
Sbjct:   64 LKDMPIIFSSDGFCDFTGYSHEEIEGKNCRFLQGTETSTEDVDRIRKAIKEQKEECVNLLNYRKDGSSFINEFFISPLLDDNEKLAYFIGVQCSVPKKGPGQMPSNAGWVYSQGNHA 180          
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A1E7EP39_9STRA (PAS domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EP39_9STRA)

HSP 1 Score: 145 bits (365), Expect = 8.300e-42
Identity = 66/116 (56.90%), Postives = 81/116 (69.83%), Query Frame = 0
Query:    2 EDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLHA 117
            +D PIIF SDGF  FTGY+ +E+EGRNCRFLQG  T   DI  IR AV+E+ EA + LLNY+KDG++F NQFFL PL  +   L YF+G+Q  V     GQ P N GW+Y+ GLHA
Sbjct:   70 KDCPIIFASDGFCNFTGYDCQEIEGRNCRFLQGPDTKKEDIDTIRQAVKEETEASVNLLNYRKDGTSFANQFFLAPLRGSDSTLLYFIGVQCSVEKLGPGQAPSNVGWIYSQGLHA 185          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A126WXS3_9PHAE1.550e-7385.47Putative LOV domain-containing protein n=1 Tax=Des... [more]
A0A126WVC6_9PHAE1.870e-7284.62Putative LOV domain-containing protein n=2 Tax=Ect... [more]
A0A126X2E3_9PHAE2.410e-7284.62Putative LOV domain-containing protein n=2 Tax=Scy... [more]
A0A6H5L122_9PHAE4.850e-7283.76PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A126WZ19_SARFS2.110e-5570.18Putative LOV domain-containing protein n=6 Tax=Sar... [more]
A0A835ZDN1_9STRA1.370e-4860.17PAS domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6U0JAP0_9STRA4.130e-4656.90Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A126WWA7_9STRA2.100e-4557.76Putative LOV domain-containing protein n=1 Tax=Syn... [more]
A0A7S4J4U8_9STRA2.680e-4455.56Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A1E7EP39_9STRA8.300e-4256.90PAS domain-containing protein n=1 Tax=Fragilariops... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.20coord: 1..107
e-value: 4.6E-38
score: 132.5
NoneNo IPR availablePANTHERPTHR47429FAMILY NOT NAMEDcoord: 2..98
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 3..91
e-value: 4.3E-9
score: 34.6
IPR000014PAS domainPFAMPF13426PAS_9coord: 2..93
e-value: 4.1E-19
score: 68.8
IPR000014PAS domainPROSITEPS50112PAScoord: 1..28
score: 9.073
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 3..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8720contigM-pyrifera_M_contig8720:173..4640 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8720.20276.1mRNA_M-pyrifera_M_contig8720.20276.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8720 173..4640 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8720.20276.1 ID=prot_M-pyrifera_M_contig8720.20276.1|Name=mRNA_M-pyrifera_M_contig8720.20276.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp
VEDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVE
EKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPES
GQEPQNPGWVYTMGLHA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR035965PAS-like_dom_sf