mRNA_M-pyrifera_M_contig8720.20276.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A126WXS3_9PHAE (Putative LOV domain-containing protein n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A126WXS3_9PHAE) HSP 1 Score: 224 bits (572), Expect = 1.550e-73 Identity = 100/117 (85.47%), Postives = 110/117 (94.02%), Query Frame = 1 Query: 1 VEDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLHA 351 + DNPIIFCSDGFA FTGY+KEEVEGRNCRFLQGAKTDPGD++KIR+AV EKREACLCLLNYKKDGSTF+NQFFLTPLFDA G LAYFLGIQVQV++ + GQEP+NPGWVYTMGLHA Sbjct: 51 LHDNPIIFCSDGFASFTGYDKEEVEGRNCRFLQGAKTDPGDVAKIRSAVSEKREACLCLLNYKKDGSTFNNQFFLTPLFDAEGTLAYFLGIQVQVKTGDKGQEPENPGWVYTMGLHA 167
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A126WVC6_9PHAE (Putative LOV domain-containing protein n=2 Tax=Ectocarpales TaxID=2877 RepID=A0A126WVC6_9PHAE) HSP 1 Score: 222 bits (565), Expect = 1.870e-72 Identity = 99/117 (84.62%), Postives = 107/117 (91.45%), Query Frame = 1 Query: 1 VEDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLHA 351 +EDNPIIFCSDGFA FTGY KEEVEGRNCRFLQGAKTDPGD++KIR AV EK+EACLCLLNYKKDGSTFHNQFFLTP+FDA G LAYFLGIQVQV++ GQEP NPGW+YTMGLHA Sbjct: 52 LEDNPIIFCSDGFADFTGYAKEEVEGRNCRFLQGAKTDPGDVTKIREAVTEKKEACLCLLNYKKDGSTFHNQFFLTPMFDAEGTLAYFLGIQVQVKTAAPGQEPANPGWIYTMGLHA 168
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A126X2E3_9PHAE (Putative LOV domain-containing protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A126X2E3_9PHAE) HSP 1 Score: 221 bits (564), Expect = 2.410e-72 Identity = 99/117 (84.62%), Postives = 108/117 (92.31%), Query Frame = 1 Query: 1 VEDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLHA 351 +EDNPIIFCSDGFA FTGY K+EVEGRNCRFLQGAKTDPGDI+KIR AV+EK+EACLCLLNYKKDGS FHNQFFLTPLFDA G LAY+LGIQVQV++ GQEP+NPGWVYTMGLHA Sbjct: 49 LEDNPIIFCSDGFAEFTGYAKDEVEGRNCRFLQGAKTDPGDITKIREAVKEKKEACLCLLNYKKDGSIFHNQFFLTPLFDAEGKLAYYLGIQVQVKTGADGQEPENPGWVYTMGLHA 165
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A6H5L122_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L122_9PHAE) HSP 1 Score: 221 bits (562), Expect = 4.850e-72 Identity = 98/117 (83.76%), Postives = 106/117 (90.60%), Query Frame = 1 Query: 1 VEDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLHA 351 +EDNPIIFCSDGFA FTGY KEEVEGRNCRFLQGAKTDPGD +KIR A++E +EACLCLLNYKKDGSTFHNQFFLTPLFD G LAYFLGIQVQV++ GQEP+NPGWVYTMGLHA Sbjct: 49 LEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDTAKIREAIKENKEACLCLLNYKKDGSTFHNQFFLTPLFDEGGTLAYFLGIQVQVKTASDGQEPENPGWVYTMGLHA 165
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A126WZ19_SARFS (Putative LOV domain-containing protein n=6 Tax=Sargassum TaxID=3015 RepID=A0A126WZ19_SARFS) HSP 1 Score: 179 bits (453), Expect = 2.110e-55 Identity = 80/114 (70.18%), Postives = 97/114 (85.09%), Query Frame = 1 Query: 7 DNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEP-QNPGWVYTMGL 345 DNPIIFCSDGF+ GY +EEVEGRNCRFLQGAKTDPGDI++IR A++E +EACLCL+NYKKDGS F+NQF+L PLFDA G LAYFLGIQV+V + + Q+P +N GW++TM L Sbjct: 53 DNPIIFCSDGFSELVGYTREEVEGRNCRFLQGAKTDPGDIAEIRDAIKENKEACLCLINYKKDGSAFNNQFYLVPLFDAGGQLAYFLGIQVEVETLDDEQQPPKNLGWLHTMCL 166
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A835ZDN1_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDN1_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.370e-48 Identity = 71/118 (60.17%), Postives = 92/118 (77.97%), Query Frame = 1 Query: 1 VEDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDAS-GNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLHA 351 +EDNPI+F S+GF+R+TGY K E+EGRNCRFLQG +T+P D+ IRAA+ + +A +CLLNY+KDG+ F NQFF+ PL DA+ G +AY+LG+Q VR E GQ +N GWVY MGLHA Sbjct: 60 LEDNPIVFSSEGFSRYTGYAKSEIEGRNCRFLQGKETNPADVETIRAAIGAQTDANVCLLNYRKDGTAFLNQFFICPLHDAATGAVAYYLGVQAAVRQKEGGQTQKNAGWVYQMGLHA 177
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A6U0JAP0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JAP0_9STRA) HSP 1 Score: 157 bits (396), Expect = 4.130e-46 Identity = 66/116 (56.90%), Postives = 87/116 (75.00%), Query Frame = 1 Query: 4 EDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLHA 351 ED PI+F SDGF FTGY E+EGRNCRFLQG T+ D+ KIR+A++ ++E + LLNYKKDG++F+N+FFL+PL++ G LAY++G+Q V+ GQ P NPGWVY GLHA Sbjct: 101 EDCPIVFASDGFCNFTGYAVSEIEGRNCRFLQGPGTEKADVDKIRSAIKSEKEESVNLLNYKKDGTSFNNEFFLSPLYEEDGKLAYYIGVQCSVKKLGPGQAPANPGWVYAQGLHA 216
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A126WWA7_9STRA (Putative LOV domain-containing protein n=1 Tax=Synura petersenii TaxID=52555 RepID=A0A126WWA7_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.100e-45 Identity = 67/116 (57.76%), Postives = 87/116 (75.00%), Query Frame = 1 Query: 1 VEDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLH 348 ++DNPI+F S+GF ++TGYEK E+EGRNCRFLQGA TDP DIS IR A+ ++ + +C+ NY K+G F NQFF+ PL D + LAYFLG+QV V GQ+ +NPGW+YTMG H Sbjct: 84 LDDNPIVFTSEGFCKYTGYEKNEIEGRNCRFLQGAGTDPKDISLIRDAIRKEIDVNVCIQNYCKNGKPFMNQFFMCPLRDENKKLAYFLGVQVVVPKKAPGQQQENPGWIYTMGNH 199
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A7S4J4U8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4U8_9STRA) HSP 1 Score: 151 bits (381), Expect = 2.680e-44 Identity = 65/117 (55.56%), Postives = 86/117 (73.50%), Query Frame = 1 Query: 1 VEDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLHA 351 ++D PIIF SDGF FTGY EE+EG+NCRFLQG +T D+ +IR A++E++E C+ LLNY+KDGS+F N+FF++PL D + LAYF+G+Q V GQ P N GWVY+ G HA Sbjct: 64 LKDMPIIFSSDGFCDFTGYSHEEIEGKNCRFLQGTETSTEDVDRIRKAIKEQKEECVNLLNYRKDGSSFINEFFISPLLDDNEKLAYFIGVQCSVPKKGPGQMPSNAGWVYSQGNHA 180
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Match: A0A1E7EP39_9STRA (PAS domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EP39_9STRA) HSP 1 Score: 145 bits (365), Expect = 8.300e-42 Identity = 66/116 (56.90%), Postives = 81/116 (69.83%), Query Frame = 1 Query: 4 EDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEEKREACLCLLNYKKDGSTFHNQFFLTPLFDASGNLAYFLGIQVQVRSPESGQEPQNPGWVYTMGLHA 351 +D PIIF SDGF FTGY+ +E+EGRNCRFLQG T DI IR AV+E+ EA + LLNY+KDG++F NQFFL PL + L YF+G+Q V GQ P N GW+Y+ GLHA Sbjct: 70 KDCPIIFASDGFCNFTGYDCQEIEGRNCRFLQGPDTKKEDIDTIRQAVKEETEASVNLLNYRKDGTSFANQFFLAPLRGSDSTLLYFIGVQCSVEKLGPGQAPSNVGWIYSQGLHA 185 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8720.20276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8720.20276.1 >prot_M-pyrifera_M_contig8720.20276.1 ID=prot_M-pyrifera_M_contig8720.20276.1|Name=mRNA_M-pyrifera_M_contig8720.20276.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp VEDNPIIFCSDGFARFTGYEKEEVEGRNCRFLQGAKTDPGDISKIRAAVEback to top mRNA from alignment at M-pyrifera_M_contig8720:173..4640+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8720.20276.1 ID=mRNA_M-pyrifera_M_contig8720.20276.1|Name=mRNA_M-pyrifera_M_contig8720.20276.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4468bp|location=Sequence derived from alignment at M-pyrifera_M_contig8720:173..4640+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8720:173..4640+ >mRNA_M-pyrifera_M_contig8720.20276.1 ID=mRNA_M-pyrifera_M_contig8720.20276.1|Name=mRNA_M-pyrifera_M_contig8720.20276.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig8720:173..4640+ (Macrocystis pyrifera P11B4 male)back to top |