prot_M-pyrifera_M_contig87183.20274.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig87183.20274.1
Unique Nameprot_M-pyrifera_M_contig87183.20274.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length209
Homology
BLAST of mRNA_M-pyrifera_M_contig87183.20274.1 vs. uniprot
Match: A0A6H5LA89_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA89_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 5.850e-19
Identity = 54/181 (29.83%), Postives = 93/181 (51.38%), Query Frame = 0
Query:   26 FSMWRSKFLAYLPSLGCLHVLSSTANPVMVGDMRVSPEELASRHSPQEIRDARLVYGLMMEAMTGYDMAEFRMQKAMSPSGAWKELEDYYMPKTIAATHRLRREFDTIRMAEDENPLLFLGRVDKAADELAMLGCGKSAEEVNRHIVTNLSSLYTIQSKSILSRPSIPRSEIDEIIRDAYA 206
            F  WR +FLAY+ +    H +  +A   +V         L  ++  Q + + +  +  ++EA  G    E  +    S +GAW+ +ED+Y+P   A    L  E D I M++DE+P LF  RV +   +L  +G  KS +EV R +V  L + Y ++ ++ LS   + R+E+ +++R  YA
Sbjct:  112 FLSWRRRFLAYVDNHNLQHTIFGSAEVPVVSCQ--DEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPF-ENNLYSCHSVAGAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSEQEVVRILVRQLPARYDVEKRTSLSNRDLTRAELQDVVRGRYA 289          
BLAST of mRNA_M-pyrifera_M_contig87183.20274.1 vs. uniprot
Match: A0A6H5JR49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR49_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.150e-7
Identity = 45/180 (25.00%), Postives = 83/180 (46.11%), Query Frame = 0
Query:   28 MWRSKFLAYLPSLGCLHVLSSTANPVMVGDMRVSPEELASRHSPQEIRDARLVYGLMMEAMTGYDMAEFRMQKAMSPSGAWKELEDYYMPKTIAATHRLRREFDTIRMAEDENPLLFLGRVDKAADELAMLGCGKSAEEVNRHIVTNLSSLYTIQSKSILSRPSIPRSEIDEIIRDAYAN 207
            +++S  +A     G   V+ S  + + VG    +  +L ++     +  A   + L++ +++ Y      +    SPSG W     YY P+  A   RL +E+ +  M   E P  + GR       LA  G      E N H+V+ LSS YT++ + + +   +   +I++ ++DAYA+
Sbjct:  156 IFKSSMVARFAQEGVHEVVMSDED-IPVGKHGANMAQLRTQFDALRVAKAIAAWNLLISSIS-YMPILSEVVSDGSPSGRWMIFLKYYEPQARAEKKRLLKEYHSFYMKSGEIPQEYFGRFYILRSRLASHGTIYPDNEANDHLVSALSSDYTLERRMLHNMADLTLQKIEQSVKDAYAD 333          
BLAST of mRNA_M-pyrifera_M_contig87183.20274.1 vs. uniprot
Match: A0A8J5Z0A9_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Z0A9_9ROSI)

HSP 1 Score: 55.1 bits (131), Expect = 2.480e-5
Identity = 41/201 (20.40%), Postives = 82/201 (40.80%), Query Frame = 0
Query:   12 SQSRPPTFDNVGAHFSMWRSKFLAYLPSLGCLHVLSSTANPVMVGDMRVSPEELASRHSPQEIRDARLVYGLMMEAMTGYDMAEFRMQKAMSPSGAWKELEDYYMPKTIAATHRL---RREFDTIRMAEDENPLLFLGRVDKAADELAMLGCGKSAEEVNRHIVTNLSSLYTIQSKSILSRPSIPRSEIDEIIRDAYANDK 209
            S + PP F+  G H  +W  K   YL +     V+++ A P     +  +P    +R    E          +   ++  D+   R+    +P  AW +L++ +         +L   RREF+ ++M E+E    +  R+    + + +LG   S   +   ++  L   Y ++  S+     +    + E+I   YA ++
Sbjct:    7 SPAAPPVFNGEGFH--IWVVKIRTYLQAFDMWEVVNTDAEPA---PLTANPTVAQTRQHANEKTKRHKAMSCIQNCVS--DVIFTRIMACETPKQAWDKLKEEFQGTERTRQQQLLNLRREFENLKMKEEETVKQYSDRIMAVVNSIRLLGEQFSEARIVEKVLLTLPERYEVKISSLEDSRDLATISLTELINTLYAQEQ 200          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87183.20274.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5LA89_9PHAE5.850e-1929.83Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JR49_9PHAE1.150e-725.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J5Z0A9_9ROSI2.480e-520.40Integrase catalytic domain-containing protein n=1 ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 98..190
e-value: 1.5E-9
score: 37.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87183contigM-pyrifera_M_contig87183:194..820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87183.20274.1mRNA_M-pyrifera_M_contig87183.20274.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig87183 194..820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig87183.20274.1 ID=prot_M-pyrifera_M_contig87183.20274.1|Name=mRNA_M-pyrifera_M_contig87183.20274.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=209bp
MSLPSLYRPSLSQSRPPTFDNVGAHFSMWRSKFLAYLPSLGCLHVLSSTA
NPVMVGDMRVSPEELASRHSPQEIRDARLVYGLMMEAMTGYDMAEFRMQK
AMSPSGAWKELEDYYMPKTIAATHRLRREFDTIRMAEDENPLLFLGRVDK
AADELAMLGCGKSAEEVNRHIVTNLSSLYTIQSKSILSRPSIPRSEIDEI
IRDAYANDK
back to top