mRNA_M-pyrifera_M_contig109692.2026.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig109692.2026.1
Unique NamemRNA_M-pyrifera_M_contig109692.2026.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig109692.2026.1 vs. uniprot
Match: UPI0018D151FF (ribosomal protein S6 kinase alpha-5 isoform X2 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D151FF)

HSP 1 Score: 65.5 bits (158), Expect = 4.280e-11
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 1 
Query:    7 PAVSASARDFVASLLIRDPRDRLGGGEGGAESVRSHPFFAGIDWDKVLQ 153
            P V A  RDF+  LL++DPR RLGGGEG AE ++ HPFF  +DW+ V +
Sbjct:  386 PDVGAEGRDFIKRLLVKDPRRRLGGGEGDAEELKRHPFFQKLDWELVAR 434
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BLAST of mRNA_M-pyrifera_M_contig109692.2026.1 vs. uniprot
Match: UPI0018D07FFE (ribosomal protein S6 kinase alpha-5 isoform X1 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D07FFE)

HSP 1 Score: 65.5 bits (158), Expect = 4.290e-11
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 1 
Query:    7 PAVSASARDFVASLLIRDPRDRLGGGEGGAESVRSHPFFAGIDWDKVLQ 153
            P V A  RDF+  LL++DPR RLGGGEG AE ++ HPFF  +DW+ V +
Sbjct:  442 PDVGAEGRDFIKRLLVKDPRRRLGGGEGDAEELKRHPFFQKLDWELVAR 490
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BLAST of mRNA_M-pyrifera_M_contig109692.2026.1 vs. uniprot
Match: UPI00118271D0 (ribosomal protein S6 kinase alpha-5 isoform X2 n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI00118271D0)

HSP 1 Score: 65.1 bits (157), Expect = 5.860e-11
Identity = 26/49 (53.06%), Postives = 35/49 (71.43%), Query Frame = 1 
Query:    7 PAVSASARDFVASLLIRDPRDRLGGGEGGAESVRSHPFFAGIDWDKVLQ 153
            P VS   +DF+  LL++DPR RLGGG+G AE ++ HPFF  +DW  VL+
Sbjct:  389 PDVSPEVQDFIRKLLVKDPRRRLGGGDGDAEELKRHPFFQNLDWQAVLR 437
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BLAST of mRNA_M-pyrifera_M_contig109692.2026.1 vs. uniprot
Match: UPI00188E2A10 (ribosomal protein S6 kinase alpha-5 isoform X1 n=2 Tax=Manduca sexta TaxID=7130 RepID=UPI00188E2A10)

HSP 1 Score: 65.1 bits (157), Expect = 5.860e-11
Identity = 26/49 (53.06%), Postives = 35/49 (71.43%), Query Frame = 1 
Query:    7 PAVSASARDFVASLLIRDPRDRLGGGEGGAESVRSHPFFAGIDWDKVLQ 153
            P VS   +DF+  LL++DPR RLGGG+G AE ++ HPFF  +DW  VL+
Sbjct:  442 PDVSPEVQDFIRKLLVKDPRRRLGGGDGDAEELKRHPFFQNLDWQAVLR 490
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BLAST of mRNA_M-pyrifera_M_contig109692.2026.1 vs. uniprot
Match: A0A5B8MRE1_9CHLO (Non-specific serine/threonine protein kinase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MRE1_9CHLO)

HSP 1 Score: 64.7 bits (156), Expect = 7.940e-11
Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 1 
Query:   25 ARDFVASLLIRDPRDRLGGGEGGAESVRSHPFFAGIDWDKVLQGT 159
            A D V  LL+ DP++RLG G GGAE ++SHPFFAG+DW +V + T
Sbjct:  268 AADLVKRLLVTDPKERLGSGPGGAEEIKSHPFFAGLDWSRVREMT 312
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BLAST of mRNA_M-pyrifera_M_contig109692.2026.1 vs. uniprot
Match: A0A8K0NWL0_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0NWL0_LADFU)

HSP 1 Score: 64.7 bits (156), Expect = 7.990e-11
Identity = 25/47 (53.19%), Postives = 35/47 (74.47%), Query Frame = 1 
Query:   13 VSASARDFVASLLIRDPRDRLGGGEGGAESVRSHPFFAGIDWDKVLQ 153
            +S    DF+  LLI+DPR RLGGG+G AE ++ HPFF G+DW+K+ +
Sbjct:   92 ISPEVADFIRRLLIKDPRKRLGGGKGDAEELKQHPFFRGMDWEKLAK 138
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BLAST of mRNA_M-pyrifera_M_contig109692.2026.1 vs. uniprot
Match: A0A8H4VR42_9AGAR (Uncharacterized protein n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4VR42_9AGAR)

HSP 1 Score: 64.7 bits (156), Expect = 8.020e-11
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 1 
Query:   16 SASARDFVASLLIRDPRDRLGGGEGGAESVRSHPFFAGIDWDKV 147
            SA ARDF+ +L+  DP +RLG   GGAE V++HPFFAGIDWDKV
Sbjct: 1422 SAEARDFMKALMTLDPNERLG--SGGAEEVKAHPFFAGIDWDKV 1463
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BLAST of mRNA_M-pyrifera_M_contig109692.2026.1 vs. uniprot
Match: A0A2R5GTZ8_9STRA (Protein kinase, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GTZ8_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.090e-10
Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 1 
Query:   13 VSASARDFVASLLIRDPRDRLGGGEGGAESVRSHPFFAGIDWDKVLQ 153
            VSA AR+ +A LL+RDPR RLG    G   +R+HPFF GIDWD +LQ
Sbjct:  356 VSAPARNLIAGLLVRDPRQRLGNRGTGVMEIRTHPFFHGIDWDALLQ 402
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BLAST of mRNA_M-pyrifera_M_contig109692.2026.1 vs. uniprot
Match: A0A7E5WRM7_TRINI (ribosomal protein S6 kinase alpha-5-like n=1 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5WRM7_TRINI)

HSP 1 Score: 64.3 bits (155), Expect = 1.090e-10
Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 1 
Query:    7 PAVSASARDFVASLLIRDPRDRLGGGEGGAESVRSHPFFAGIDWDKV 147
            P VS   +DF+  LL++DPR RLGGGEG AE ++ HPFF  +DW+ V
Sbjct:  164 PDVSPEVQDFIRKLLVKDPRRRLGGGEGDAEELKRHPFFQNLDWEGV 210
[Close]
BLAST of mRNA_M-pyrifera_M_contig109692.2026.1 vs. uniprot
Match: A0A409VD39_9AGAR (Uncharacterized protein n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409VD39_9AGAR)

HSP 1 Score: 63.9 bits (154), Expect = 1.500e-10
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 1 
Query:   16 SASARDFVASLLIRDPRDRLGGGEGGAESVRSHPFFAGIDWDKV 147
            S  ARDF+ SLL  DP +RLG G  GAE V++HPFFAGIDWDKV
Sbjct: 1433 SPEARDFMKSLLTLDPAERLGAG--GAEEVKAHPFFAGIDWDKV 1474
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109692.2026.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0018D151FF4.280e-1155.10ribosomal protein S6 kinase alpha-5 isoform X2 n=1... [more]
UPI0018D07FFE4.290e-1155.10ribosomal protein S6 kinase alpha-5 isoform X1 n=1... [more]
UPI00118271D05.860e-1153.06ribosomal protein S6 kinase alpha-5 isoform X2 n=1... [more]
UPI00188E2A105.860e-1153.06ribosomal protein S6 kinase alpha-5 isoform X1 n=2... [more]
A0A5B8MRE1_9CHLO7.940e-1157.78Non-specific serine/threonine protein kinase n=1 T... [more]
A0A8K0NWL0_LADFU7.990e-1153.19Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
A0A8H4VR42_9AGAR8.020e-1165.91Uncharacterized protein n=1 Tax=Agrocybe pediades ... [more]
A0A2R5GTZ8_9STRA1.090e-1059.57Protein kinase, putative n=1 Tax=Hondaea fermental... [more]
A0A7E5WRM7_TRINI1.090e-1055.32ribosomal protein S6 kinase alpha-5-like n=1 Tax=T... [more]
A0A409VD39_9AGAR1.500e-1068.18Uncharacterized protein n=1 Tax=Panaeolus cyanesce... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig109692contigM-pyrifera_M_contig109692:417..575 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score65.5
Seed ortholog evalue8.7e-09
Seed eggNOG ortholog192875.XP_004365291.1
Preferred nameSGK2
KEGG koko:K13302,ko:K13303,ko:K13304
KEGG Pathwayko04068,ko04150,ko04151,ko04960,map04068,map04150,map04151,map04960
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000226,GO:0000902,GO:0001558,GO:0002028,GO:0002119,GO:0002164,GO:0003008,GO:0003013,GO:0003014,GO:0003096,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004712,GO:0005246,GO:0005488,GO:0005515,GO:0005543,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005768,GO:0005769,GO:0005783,GO:0005789,GO:0005829,GO:0005886,GO:0006355,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006873,GO:0006875,GO:0006883,GO:0006950,GO:0006952,GO:0006954,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007019,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007492,GO:0007498,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007616,GO:0007632,GO:0008015,GO:0008092,GO:0008150,GO:0008152,GO:0008217,GO:0008289,GO:0008306,GO:0008542,GO:0009314,GO:0009416,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009791,GO:0009888,GO:0009889,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010639,GO:0010646,GO:0010648,GO:0010720,GO:0010765,GO:0010769,GO:0010770,GO:0010941,GO:0010959,GO:0010975,GO:0010976,GO:0012505,GO:0014070,GO:0015459,GO:0015672,GO:0016020,GO:0016043,GO:0016247,GO:0016301,GO:0016310,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016773,GO:0017080,GO:0017081,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019222,GO:0019538,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0022008,GO:0022411,GO:0022603,GO:0022604,GO:0023051,GO:0023052,GO:0023057,GO:0030001,GO:0030003,GO:0030004,GO:0030030,GO:0030154,GO:0030182,GO:0030307,GO:0030334,GO:0031109,GO:0031110,GO:0031111,GO:0031113,GO:0031115,GO:0031175,GO:0031323,GO:0031326,GO:0031333,GO:0031344,GO:0031346,GO:0031410,GO:0031960,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032271,GO:0032272,GO:0032409,GO:0032411,GO:0032501,GO:0032502,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032886,GO:0032984,GO:0032989,GO:0032990,GO:0033043,GO:0033554,GO:0033993,GO:0034220,GO:0035091,GO:0035556,GO:0036211,GO:0040008,GO:0040012,GO:0042127,GO:0042175,GO:0042221,GO:0042592,GO:0042981,GO:0042995,GO:0043005,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043269,GO:0043270,GO:0043401,GO:0043402,GO:0043412,GO:0043423,GO:0043434,GO:0043624,GO:0043933,GO:0044057,GO:0044058,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045927,GO:0048037,GO:0048156,GO:0048382,GO:0048468,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048585,GO:0048666,GO:0048699,GO:0048731,GO:0048812,GO:0048814,GO:0048856,GO:0048858,GO:0048869,GO:0048878,GO:0050767,GO:0050769,GO:0050773,GO:0050775,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050877,GO:0050890,GO:0050896,GO:0051046,GO:0051049,GO:0051050,GO:0051090,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051252,GO:0051261,GO:0051270,GO:0051384,GO:0051493,GO:0051494,GO:0051716,GO:0051726,GO:0051960,GO:0051962,GO:0055037,GO:0055065,GO:0055067,GO:0055078,GO:0055080,GO:0055082,GO:0055085,GO:0060255,GO:0060284,GO:0060341,GO:0060453,GO:0060548,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070293,GO:0070294,GO:0070507,GO:0070887,GO:0071310,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0097435,GO:0097458,GO:0097708,GO:0098771,GO:0098772,GO:0098827,GO:0099106,GO:0120025,GO:0120035,GO:0120036,GO:0120039,GO:0140096,GO:1900006,GO:1901099,GO:1901564,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901981,GO:1902903,GO:1902904,GO:1903506,GO:1903827,GO:1904375,GO:1904508,GO:1905475,GO:2000026,GO:2000112,GO:2000145,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237,GO:2001239,GO:2001240
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGs38BVS@33154,KOG0598@1,KOG0598@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons1
Model size159
Cds size159
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815607.3664827-CDS-M-pyrifera_M_contig109692:416..5751622815607.3664827-CDS-M-pyrifera_M_contig109692:416..575Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig109692 417..575 +
1692277484.9909658-CDS-M-pyrifera_M_contig109692:416..5751692277484.9909658-CDS-M-pyrifera_M_contig109692:416..575Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig109692 417..575 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig109692.2026.1prot_M-pyrifera_M_contig109692.2026.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig109692 417..575 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig109692.2026.1

>prot_M-pyrifera_M_contig109692.2026.1 ID=prot_M-pyrifera_M_contig109692.2026.1|Name=mRNA_M-pyrifera_M_contig109692.2026.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=53bp
SSPAVSASARDFVASLLIRDPRDRLGGGEGGAESVRSHPFFAGIDWDKVL
QGT
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mRNA from alignment at M-pyrifera_M_contig109692:417..575+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig109692.2026.1 ID=mRNA_M-pyrifera_M_contig109692.2026.1|Name=mRNA_M-pyrifera_M_contig109692.2026.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=159bp|location=Sequence derived from alignment at M-pyrifera_M_contig109692:417..575+ (Macrocystis pyrifera P11B4 male)
TCGTCTCCTGCAGTTTCTGCTTCTGCTCGGGATTTCGTGGCGTCACTTTT
GATACGTGATCCACGTGATCGGCTTGGAGGTGGAGAGGGTGGGGCTGAAA
GTGTTCGCAGCCACCCATTTTTTGCTGGCATCGATTGGGACAAGGTCCTG
CAAGGCACT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig109692:417..575+

>mRNA_M-pyrifera_M_contig109692.2026.1 ID=mRNA_M-pyrifera_M_contig109692.2026.1|Name=mRNA_M-pyrifera_M_contig109692.2026.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=318bp|location=Sequence derived from alignment at M-pyrifera_M_contig109692:417..575+ (Macrocystis pyrifera P11B4 male)
TCGTCTCCTGCAGTTTCTGCTTCTGCTCGGGATTTCGTGGCGTCACTTTT
GATACGTGATCCACGTGATCGGCTTGGAGGTGGAGAGGGTGGGGCTGAAA
GTGTTCGCAGCCACCCATTTTTTGCTGGCATCGATTGGGACAAGGTCCTG
CAAGGCACTTCGTCTCCTGCAGTTTCTGCTTCTGCTCGGGATTTCGTGGC
GTCACTTTTGATACGTGATCCACGTGATCGGCTTGGAGGTGGAGAGGGTG
GGGCTGAAAGTGTTCGCAGCCACCCATTTTTTGCTGGCATCGATTGGGAC
AAGGTCCTGCAAGGCACT
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