mRNA_M-pyrifera_M_contig87.20227.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig87.20227.1 vs. uniprot
Match: A0A6H5JUE4_9PHAE (Proteasome subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE4_9PHAE) HSP 1 Score: 384 bits (987), Expect = 2.240e-132 Identity = 201/254 (79.13%), Postives = 219/254 (86.22%), Query Frame = 1 Query: 1 RRQLGGDGTPVLESLMQHPAAGLGQHNQRGAGFEPYADNGGTVVAVAGRDYCIIAADSRLSDGYSILTRNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIRGYESQQRRTMGVKAMSHMLSTHLYYRRSFPFYTFNILGGLDDEGTGAVYGYDAVGSFERVRVACAGGGQSIMQPVLDRLDA-EAGEGAGGSG----EMPIVAVELEEALSLVRRAFVAAGERNIRLGDRVEIVVLTREGQRREHLQLKKH 747 RRQLG GTP+ ESL+Q P GL + + GAGFEPYA+NGGTVVAVAG DYCIIAADSRLSDGY+IL+RNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIR YE +QRRTMG KA+S MLSTHLYYRR FPFYTFNI+GGLD+EG GAVYGYDAVGSFERVRVACAGGG S+MQPVLDRLDA EA GAGG E P+VAV LEEAL+LVR+AFVA GER+I LGD VEIVV+TR+G RRE LQLK H Sbjct: 52 RRQLGQQGTPIAESLLQTPP-GLEESRRNGAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEEGIGAVYGYDAVGSFERVRVACAGGGLSLMQPVLDRLDAAEAATGAGGGQRAGREQPVVAVGLEEALALVRKAFVAGGERDISLGDEVEIVVVTRKGHRRERLQLKSH 304
BLAST of mRNA_M-pyrifera_M_contig87.20227.1 vs. uniprot
Match: D8LKA7_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKA7_ECTSI) HSP 1 Score: 364 bits (934), Expect = 3.790e-125 Identity = 194/254 (76.38%), Postives = 211/254 (83.07%), Query Frame = 1 Query: 1 RRQLGGDGTPVLESLMQHPAAGLGQHNQRGAGFEPYADNGGTVVAVAGRDYCIIAADSRLSDGYSILTRNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIRGYESQQRRTMGVKAMSHMLSTHLYYRRSFPFYTFNILGGLDDEGTGAVYGYDAVGSFERVRVACAGGGQSIMQPVLDRLDA-EAGEGAGGSG----EMPIVAVELEEALSLVRRAFVAAGERNIRLGDRVEIVVLTREGQRREHLQLKKH 747 R + GDG L L + + + GAGFEPYA+NGGTVVAVAG DYCIIAADSRLSDGY+IL+RNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIR YE +QRRTMG KA+S MLSTHLYYRR FPFYTFNI+GGLD+EG GAVYGYDAVGSFERVRVACAGGG S+MQPVLDRLDA EA GAGG G E P+VAV LEEAL+LVRRAFVA GER+I LGD VEIVV+TR+G RRE LQLK H Sbjct: 3 RGRPAGDGQQGLHGLRRATS-------RNGAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEEGIGAVYGYDAVGSFERVRVACAGGGLSLMQPVLDRLDAAEAVTGAGGCGRAGREQPVVAVGLEEALALVRRAFVAGGERDISLGDEVEIVVVTRQGHRRERLQLKSH 249
BLAST of mRNA_M-pyrifera_M_contig87.20227.1 vs. uniprot
Match: A0A835YWZ6_9STRA (Nucleophile aminohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ6_9STRA) HSP 1 Score: 234 bits (596), Expect = 4.290e-73 Identity = 120/226 (53.10%), Postives = 162/226 (71.68%), Query Frame = 1 Query: 73 QHNQRGAGFEPYADNGGTVVAVAGRDYCIIAADSRLSDGYSILTRNVTRVHRLSGD-THLATAGCWADTQGLLRLLEYLIRGYESQQRRTMGVKAMSHMLSTHLYYRRSFPFYTFNILGGLDDEGTGAVYGYDAVGSFERVRVACAGGGQSIMQPVLDRLDAEAGEGAGGSGEMPIVAVELEEALSLVRRAFVAAGERNIRLGDRVEIVVLTREGQRREHLQLKKH 747 Q ++R G++PY DNGGTVVAVAG D+ II AD+RLS Y+IL+R VTR+H +SG T + TAGCW+DTQGLL+ ++ L+ YE QQ+ ++ A++ +LS LY RRSFPFYT NI+ GLD EG GAVYGYD VGSFERV+VAC GGG+S++QP++D L + + + P+V+V ++AL LV+ FVAA ER+I +GD EI+V+ +G R L L H Sbjct: 78 QVSKRADGWQPYEDNGGTVVAVAGPDFVIIGADTRLSVNYNILSRKVTRIHGISGARTFIGTAGCWSDTQGLLKAMQGLVGDYEWQQQHSISTAALARLLSNVLYSRRSFPFYTHNIVAGLDREGAGAVYGYDPVGSFERVKVACVGGGRSLLQPIMDHLAGD--QDSSLDRRKPLVSVSCDDALELVKEGFVAAAERDIAIGDEAEILVIDAQGVTRHRLALGTH 301
BLAST of mRNA_M-pyrifera_M_contig87.20227.1 vs. uniprot
Match: A0A2K3CN11_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3CN11_CHLRE) HSP 1 Score: 205 bits (522), Expect = 1.180e-62 Identity = 115/236 (48.73%), Postives = 153/236 (64.83%), Query Frame = 1 Query: 34 LESLMQHPAAGLGQHNQRGAGFEPYADNGGTVVAVAGRDYCIIAADSRLSDGYSILTRNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIRGYESQQRRTMGVKAMSHMLSTHLYYRRSFPFYTFNILGGLDDEGTGAVYGYDAVGSFERVRVACAGGGQSIMQPVLDRLDAEAGEGAGGSGEMPIVAVELEEALSLVRRAFVAAGERNIRLGDRVEIVVLTREGQRREHLQLK 741 L + A G QH A + PY DNGGTVVAVAG DYCI+AA +R+S G+SILTR T + +LS +A+AG AD + L +LL+ Y R M + A + +LS LYY+R FPFYTFN+ GLD++G GAVY YDA+GS+ER C G G+ ++QPVLD +A + + A+ LE+AL LV+ AFV+AGER+I GD+VEI+++TREG RR+ LQLK Sbjct: 14 LSKVQADAADGQRQH----AAWSPYDDNGGTVVAVAGEDYCIVAASTRMSTGFSILTREATMMLQLSDKVVIASAGMQADRKALHKLLQARHVMYVHNHGRPMSLPATAQLLSNTLYYKRFFPFYTFNLCAGLDEQGRGAVYNYDAIGSYERSGYFCQGSGKELIQPVLDN-QLKAASPLALPPQNTLTALPLEQALDLVKDAFVSAGERDIYTGDQVEILIITREGVRRDSLQLK 244
BLAST of mRNA_M-pyrifera_M_contig87.20227.1 vs. uniprot
Match: A0A2P6TE46_CHLSO (Proteasome subunit beta n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TE46_CHLSO) HSP 1 Score: 203 bits (516), Expect = 7.680e-62 Identity = 112/238 (47.06%), Postives = 158/238 (66.39%), Query Frame = 1 Query: 31 VLESLMQHPAAGLGQHNQRGAGFEPYADNGGTVVAVAGRDYCIIAADSRLSDGYSILTRNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIRGYESQQRRTMGVKAMSHMLSTHLYYRRSFPFYTFNILGGLDDEGTGAVYGYDAVGSFERVRVACAGGGQSIMQPVLDRLDAEAGEGAGGSGEMPIVAVELEEALSLVRRAFVAAGERNIRLGDRVEIVVLTREGQRREHLQLKK 744 L Q P+ G G+H Q A + PY DNGGTVVAVAG DYC++AA +R+S GYSILTR+ T++ RL+ +A+AG AD + L ++L Y+ R+ M A + +LS LYY+R FP+YTFN+ GLD+EG GAVY YDA+GS+ERV C G G+ ++QPVLD +A + + ++ LE+A+ LV+ AFV+AGER+I GD VEI+++T+EG R + L+LK+ Sbjct: 4 ALPMRAQVPSVG-GEHRQH-ASWSPYDDNGGTVVAVAGDDYCVVAASTRMSTGYSILTRDKTKILRLNPKCVVASAGMQADMETLHKMLHMRHVTYQFNHRKPMSCPATAQLLSNTLYYKRFFPYYTFNLCAGLDEEGKGAVYTYDAIGSYERVGYGCQGSGKELIQPVLDN-QLKAASPLVLPQQQWLSSLPLEQAVDLVKGAFVSAGERDIYTGDDVEILIITKEGVRTDRLELKR 238
BLAST of mRNA_M-pyrifera_M_contig87.20227.1 vs. uniprot
Match: A0A250X805_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X805_9CHLO) HSP 1 Score: 202 bits (513), Expect = 1.130e-61 Identity = 107/216 (49.54%), Postives = 149/216 (68.98%), Query Frame = 1 Query: 97 FEPYADNGGTVVAVAGRDYCIIAADSRLSDGYSILTRNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIRGYESQQRRTMGVKAMSHMLSTHLYYRRSFPFYTFNILGGLDDEGTGAVYGYDAVGSFERVRVACAGGGQSIMQPVLDRLDAEAGEGAGGSGEMPIVAVELEEALSLVRRAFVAAGERNIRLGDRVEIVVLTREGQRREHLQLKK 744 + PY DNGGTV+AVAG DYCIIAA +R+S GYSILTR+ +++ +LS + + +AG AD + L ++L+ Y+ + M V A++ +LS LYY+R FP+YTFNI+ GLDD G GAVY YDA+GS+ER AC G G+ ++QPVLD +A I ++ L++AL LV+ AF +AGER+I GD VEIV++T+EG R+E L+LKK Sbjct: 3 WSPYDDNGGTVLAVAGLDYCIIAACTRMSTGYSILTRDSSKILQLSNEVCITSAGMQADAKALHKVLQMRNIMYQHNHSKPMSVSAVAQLLSNTLYYKRFFPYYTFNIVAGLDDAGVGAVYAYDAIGSYERSGYACQGSGKGLIQPVLDN-QLKADSPLLIPPRNTITSLPLDQALDLVKDAFTSAGERDIYTGDEVEIVIITKEGTRKERLELKK 217
BLAST of mRNA_M-pyrifera_M_contig87.20227.1 vs. uniprot
Match: A0A7S0WU99_9CHLO (Proteasome subunit beta n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WU99_9CHLO) HSP 1 Score: 200 bits (508), Expect = 6.440e-61 Identity = 102/215 (47.44%), Postives = 148/215 (68.84%), Query Frame = 1 Query: 97 FEPYADNGGTVVAVAGRDYCIIAADSRLSDGYSILTRNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIRGYESQQRRTMGVKAMSHMLSTHLYYRRSFPFYTFNILGGLDDEGTGAVYGYDAVGSFERVRVACAGGGQSIMQPVLDRLDAEAGEGAGGSGEMPIVAVELEEALSLVRRAFVAAGERNIRLGDRVEIVVLTREGQRREHLQLK 741 + PYADNGGTV+AVAG DYCI+AA +R+S G+ ILTRN +++ +L+ +A+AG ADT+ L ++L+ Y R M V A + +LS LYY+R FP+YTFN+ GLD++G GAVY YDA+GS+ER C G G+ ++QPVLD +A + + ++ +E+AL LV+ AFV+AGER+I GD VEI+++T++G R++ LQLK Sbjct: 3 WSPYADNGGTVLAVAGEDYCIVAASTRMSSGFDILTRNSSKLLQLNESVVIASAGMQADTKALHKMLQSRHVMYHHANNRNMSVSAAAQLLSNTLYYKRFFPYYTFNLCAGLDEQGRGAVYNYDAIGSYERSGYFCQGSGKELIQPVLDN-QLKAASPLALPAKNTLTSLPMEQALDLVKDAFVSAGERDIYTGDEVEILIITKDGTRKDTLQLK 216
BLAST of mRNA_M-pyrifera_M_contig87.20227.1 vs. uniprot
Match: A0A2P6VQ16_9CHLO (Proteasome subunit beta n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VQ16_9CHLO) HSP 1 Score: 200 bits (509), Expect = 8.760e-61 Identity = 111/232 (47.84%), Postives = 157/232 (67.67%), Query Frame = 1 Query: 55 PAAGLG--QHNQRGAGFEPYADNGGTVVAVAGRDYCIIAADSRLSDGYSILTRNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIRGYESQQRRTMGVKAMSHMLSTHLYYRRSFPFYTFNILGGLDDEGTGAVYGYDAVGSFERVRVACAGGGQSIMQPVLDRLDAEAGEGAGGSGEMPIVAVELEEALSLVRRAFVAAGERNIRLGDRVEIVVLTREGQRREHLQLKK 744 PAAG G QH A + PY DNGGTVVAVAG DYC++AA +R+S GYSILTRN +++ + +A+AG AD + L ++L Y+ RR MG +AM+ +LS LY++R FP+YTFN+ GLD++G GAVY YDA+GS+ERV C G G+ ++QPVLD +A + + ++ LE+A+ LV+ AFV+AGER+I GD VEI++LT++G R + L+LK+ Sbjct: 12 PAAGSGVKQH----ASWSPYDDNGGTVVAVAGDDYCVVAASTRMSTGYSILTRNKSKILTFNPKCLIASAGMQADMETLHKVLHSRHVTYQFNHRRPMGCQAMAQLLSNTLYHKRFFPYYTFNLCAGLDEQGRGAVYTYDAIGSYERVGYGCQGSGKELIQPVLDN-QLKAASPLVLPAQQWLSSLPLEQAVDLVKGAFVSAGERDIYTGDDVEILILTKDGIRTDKLELKR 238
BLAST of mRNA_M-pyrifera_M_contig87.20227.1 vs. uniprot
Match: A0A835XPU1_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XPU1_9CHLO) HSP 1 Score: 199 bits (505), Expect = 4.370e-60 Identity = 113/240 (47.08%), Postives = 157/240 (65.42%), Query Frame = 1 Query: 22 GTPVLESLMQHPAAGLGQHNQRGAGFEPYADNGGTVVAVAGRDYCIIAADSRLSDGYSILTRNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIRGYESQQRRTMGVKAMSHMLSTHLYYRRSFPFYTFNILGGLDDEGTGAVYGYDAVGSFERVRVACAGGGQSIMQPVLDRLDAEAGEGAGGSGEMPIVAVELEEALSLVRRAFVAAGERNIRLGDRVEIVVLTREGQRREHLQLK 741 G P+ + + A+G QH A + PY DNGGTVVAVAG DYCI+A +RLS G+SILTR+ + + +L+ +A+AG AD + L +LL+ Y+ R M V A + +LS LYY+R FPFYTFN++ GLD++G GAVY YDA+GS+ER AG G+ ++QPVLD +A I A+ L++A+ LV+ FV+AGER+I GDRVEI+++T+EG RR+ LQLK Sbjct: 11 GNPITK-VHTDAASGEKQH----ATWSPYDDNGGTVVAVAGEDYCIVAGSTRLSTGFSILTRDASMMLQLTDKVVVASAGMQADRKALHKLLQARNVMYQHNHGRPMSVSAAAQLLSNTLYYKRFFPFYTFNLVAGLDEQGRGAVYNYDAIGSYERSGYFSAGSGKGLVQPVLDN-QLKAASPLLLPPRSTITALPLDQAIDLVKDVFVSAGERDIYTGDRVEILIITKEGIRRDELQLK 244
BLAST of mRNA_M-pyrifera_M_contig87.20227.1 vs. uniprot
Match: E1ZDT5_CHLVA (Proteasome subunit beta n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZDT5_CHLVA) HSP 1 Score: 197 bits (501), Expect = 1.410e-59 Identity = 111/239 (46.44%), Postives = 160/239 (66.95%), Query Frame = 1 Query: 28 PVLESLMQHPAAGLGQHNQRGAGFEPYADNGGTVVAVAGRDYCIIAADSRLSDGYSILTRNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIRGYESQQRRTMGVKAMSHMLSTHLYYRRSFPFYTFNILGGLDDEGTGAVYGYDAVGSFERVRVACAGGGQSIMQPVLDRLDAEAGEGAGGSGEMPIVAVELEEALSLVRRAFVAAGERNIRLGDRVEIVVLTREGQRREHLQLKK 744 PV S+ PAAG Q ++ A + PY DNGGTVVAVAG DYC++AA +R+S GYSILTRN +++ +L+ +A+AG AD + L ++L Y+ R+ M AM+ +LS LYY+R FP+YTFN+ GLDDEG GAVY YDA+GS+ERV C G G+ ++QPVLD +A + + ++ LE+A+ LV+ AFV+AGER+I GD VEI+++T++ + + L+LK+ Sbjct: 6 PVRASV---PAAG--QAVKQHATWSPYDDNGGTVVAVAGDDYCVVAASTRMSTGYSILTRNKSKILQLNPKCVIASAGMQADQETLHKVLHSRHVTYQFNHRKPMACPAMAQLLSNTLYYKRFFPYYTFNLCAGLDDEGRGAVYTYDAIGSYERVGYGCQGNGKELVQPVLDN-QLKAASPLALPPQQWLSSLPLEQAVDLVKGAFVSAGERDIYTGDDVEILIITKDCIKTDRLELKR 238 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87.20227.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig87.20227.1 >prot_M-pyrifera_M_contig87.20227.1 ID=prot_M-pyrifera_M_contig87.20227.1|Name=mRNA_M-pyrifera_M_contig87.20227.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=250bp RRQLGGDGTPVLESLMQHPAAGLGQHNQRGAGFEPYADNGGTVVAVAGRDback to top mRNA from alignment at M-pyrifera_M_contig87:5176..9251- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig87.20227.1 ID=mRNA_M-pyrifera_M_contig87.20227.1|Name=mRNA_M-pyrifera_M_contig87.20227.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4076bp|location=Sequence derived from alignment at M-pyrifera_M_contig87:5176..9251- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig87:5176..9251- >mRNA_M-pyrifera_M_contig87.20227.1 ID=mRNA_M-pyrifera_M_contig87.20227.1|Name=mRNA_M-pyrifera_M_contig87.20227.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1500bp|location=Sequence derived from alignment at M-pyrifera_M_contig87:5176..9251- (Macrocystis pyrifera P11B4 male)back to top |