mRNA_M-pyrifera_M_contig86969.20221.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: A0A2D4BRN0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRN0_PYTIN) HSP 1 Score: 86.3 bits (212), Expect = 6.910e-16 Identity = 77/251 (30.68%), Postives = 113/251 (45.02%), Query Frame = 1 Query: 1 RGVVAQREFVSGEVVVEEEAVASVPMDQLRTCAGCLRSFGAPEDLKRCGCCRVVGYCCEECQRKDWENG-HNVECAVFAKSWKKRRKRIPP----TRYEALLPLLGERNEPRLL-----EIDTSPLELFVSLEDHCEDANLTQKAQWHALAMVVGEVMG---IGGEEKGVDGLDGRRLLG------DWDCTLESLW--------LGLFPKVALMNHACDANCSVSFREGGRVVVRTIRRVKCGEPLTITYI 672 R VVA + G ++ A A+V +C C + A L RC CR+ YC +CQR+DW +G H +EC + K +PP T + +L +L R RL +S E ++L H ED + +Q ++ +A +V ++ E V L+ R L +C SL LG+FP+ AL+NHAC C VSF R ++ IR V GE LTI+Y+ Sbjct: 25 RCVVATKRLRRGTTLLVAPAFAAV---STTSCNACFAT-DATASLLRCSGCRLARYCSRQCQRRDWSDGMHALECVAW--------KSVPPHCRNTAAQTILLVL--RLTARLWFRSPSSSSSSDHEDVLALRHHVEDHSTSQLREFEDMARLVLALLARSKFNAEGLDVSTLETRHLRDVVLLFCRVNCNAFSLCDDVNRATGLGVFPRAALLNHACAPTCVVSFEPSARARLQLIRDVDAGEELTISYV 261
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: A0A3P9NLW2_POERE (SET and MYND domain containing 1 n=1 Tax=Poecilia reticulata TaxID=8081 RepID=A0A3P9NLW2_POERE) HSP 1 Score: 83.2 bits (204), Expect = 7.930e-15 Identity = 72/233 (30.90%), Postives = 103/233 (44.21%), Query Frame = 1 Query: 1 RGVVAQREFVSGEVVVEEEAVASVPMDQL--RTCAGCLRSFGAPEDLKRCGCCRVVGYCCEECQRKDWENGHNVECAVFAKSWKKRRKRIPPTRYEALLPLLGERNEPRLLEIDTSPLELFVSLEDHCEDANLTQKAQWHALAMVVGEVMGIGGEEKGVD------GLDGRRLLGDWDCT-LESLWLGLFPKVALMNHACDANCSVSFREGGRVVVRTIRRVKCGEPLTITYI 672 RG+ A REF +GEV++ E A+V L + C C R +L RC CR YC CQ W++ H ECA K P LL RN + L D+ L + L+DH D Q A G ++ D GL L D L+++ LGLFP ++L+NH C NC+ + G ++ +R + R++ GE LTI+Y+ Sbjct: 11 RGLRASREFSTGEVLLAEPGYAAVVYSSLASQVCHSCFRRQA---NLHRCAQCRFAHYCNRTCQTAGWDD-HRQECAAIRKLGA-----APNEDVRLAGRLLWRRNRDQGLASDSQLLAVD-QLQDHLRDLPEDQLGALQADVQTFLRFWSCGSKQHPADFIGHVFGLIKSNGLTLPDQRGLQTVGLGLFPNLSLVNHDCWPNCTATLNHG-KMELRALGRIRQGEELTISYV 232
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: A0A3Q2FLV5_CYPVA (SET and MYND domain containing 1 n=2 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2FLV5_CYPVA) HSP 1 Score: 79.0 bits (193), Expect = 2.260e-13 Identity = 75/266 (28.20%), Postives = 105/266 (39.47%), Query Frame = 1 Query: 1 RGVVAQREFVSGEVVVEEEAVASVPMDQL--RTCAGCLRSFGAPEDLKRCGCCRVVGYCCEECQRKDWENGHNVECAVFAKSWKKRRKRIPPTRYEALLPLLGERNEPRLLEIDTSPLELFVSLEDHCEDANLTQKAQWHALAMVVGEVMGIGGEEKGVDGLDGRRLLGDWDC----------------------TL------ESLWLGLFPKVALMNHACDANCSVSFREGGRVVV------------RTIRRVKCGEPLTITYI 672 RG+ A+R+ +GEV+ E + A+V + L + C C R +L RC CR YC CQ W++ H ECA KS +P LL RN + L D S L L+DH D + GE+ + LD R L W C TL ES+ LGLFP ++L+NH C NC+ + G R V R + ++ GE LT++Y+ Sbjct: 16 RGLRARRDINTGEVLFAEPSYAAVVFNSLASQVCHSCFRRQA---NLHRCAQCRFAHYCDRTCQTAGWDD-HKQECAAIRKSGS-----VPNENVRLAARLLWRRNRDQGLASD-SQLVPVDQLQDHLTD-------------LPAGELEKLE--------LDVRNFLRFWSCGTKQHPSEYISHIFGIIKFNGLTLQDQRGQESVGLGLFPNLSLVNHDCWPNCTATLNHGNRSAVSSTLHSPLRMELRALGKISEGEELTVSYV 250
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: A0A3Q2QYQ3_FUNHE (Histone-lysine N-methyltransferase SMYD1-like n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2QYQ3_FUNHE) HSP 1 Score: 77.0 bits (188), Expect = 1.060e-12 Identity = 69/248 (27.82%), Postives = 105/248 (42.34%), Query Frame = 1 Query: 1 RGVVAQREFVSGEVVVEEEAVASVPMDQL--RTCAGCLRSFGAPEDLKRCGCCRVVGYCCEECQRKDWENGHNVECAVFAKSWKKRRKRIPPTRYEALLPLLGERNEPRLLEIDTSPLELFVSLEDHCEDANLTQKAQWHALAMVVGEVMGIGGEEKGVDGLDG-RRLLGDWDCT---------LESLWLGLFPKVALMNHACDANCSVSFREGGRVVVRTI----RRVKC--------GEPLTITYI 672 RG+ A +EF G+V+ E ++++V D L R C C R E L+RCG C+ YC CQR W H EC+ K++ K P L+ + R + + L LEDH D Q+ L + + + +D + G +C L+++ +GLFP + L+NH C NC+V G + V TI RR++ GE LT+ Y+ Sbjct: 14 RGLKATKEFWPGDVIFSEPSLSAVVFDSLAERICHSCFRR---QEKLQRCGQCKFAHYCDRTCQRAGWAE-HKQECSAI-KAYGK-----APNENIRLVARIMWRLDKEGSVVSDMQLTTLDELEDHLNDM---QEDDLKELKVDIHNFLDYWPRTSKQHTIDDISHIFGVINCNGFSVSDQRGLQTVGVGLFPNLCLVNHDCWPNCTVILNHGSQSAVNTIFHSQRRIELRPLDKIAEGEELTVAYV 248
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: F1QDG9_DANRE (SET and MYND domain-containing 1a n=6 Tax=Bilateria TaxID=33213 RepID=F1QDG9_DANRE) HSP 1 Score: 73.9 bits (180), Expect = 1.170e-11 Identity = 70/249 (28.11%), Postives = 100/249 (40.16%), Query Frame = 1 Query: 1 RGVVAQREFVSGEVVVEEEAVASVPMDQL--RTCAGCLRSFGAPEDLKRCGCCRVVGYCCEECQRKDWENGHNVECAVFAKSWKKRRKRIPPTRYEALLPLLGERNEPRLLEIDTSPLELFVSLEDHC-----EDAN------LTQKAQWHALAMVVGEVMGIGGEEKGVDGLDGRRLLGDWDCTLESLWLGLFPKVALMNHACDANCSV------------SFREGGRVVVRTIRRVKCGEPLTITYI 672 RG+ R+ +GEVV E + A+V +D L + C C R P RC C+ YC CQR W+ H EC+ K P L+ + R + + S L LEDH ED T W + VGE GV +G L L+S+ +GLFP + L+NH C NC+V SF R+ +R + + G+ LT++Y+ Sbjct: 19 RGLRGTRDLSAGEVVFAEASFAAVVLDSLSLQVCHSCFRRQVNPH---RCAQCKFAHYCDRTCQRAAWDE-HRKECSAIRNIGK------APNENVRLVARILWRIQKHTGLVSDSQLTTLDMLEDHLSRMTPEDLKELKVDVKTFYTYWPKKSKAVGE--DYVSHLFGVISCNGFTLSDQRG--LQSVGIGLFPNLCLVNHDCWPNCTVILNHGDQSALDASFHSSRRIELRALEPISAGQELTVSYV 253
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: A0A507ED68_9FUNG (SET domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507ED68_9FUNG) HSP 1 Score: 73.9 bits (180), Expect = 1.390e-11 Identity = 74/267 (27.72%), Postives = 111/267 (41.57%), Query Frame = 1 Query: 1 RGVVAQREFVSGEVVVEEEAVASV----PMDQLRTCAGCLRS-------------FGAPEDLKRC---GCCRVVGYCCEECQRKDWENGHNVECAVFAKSWKKRRKRIP------PTRYEALLPLLGERNEPRLLEIDT-----SPLELFVSLEDH----------CEDANLTQKAQW--HALAMVVGEVMGIGGEEKGVDGLDGRRLLGDWDCTLESLWLGLFPKVALMNHACDANCSVSFREGGRVVVRTIRRVKCGEPLTITYI 672 R VVA G +VV E+A A V MD+L C C+R FG+ + K GC + YC EC D E H++EC V + +P T Y + +LG L + T +P E L H C +A AQ+ L++ E++ + + ++ T + + +G+FP VA++NHAC NCS GR++VRT+R V+ GE L +TY+ Sbjct: 27 RHVVASESLPKGTLVVSEDAAAFVLLKASMDEL--CLRCVRPLDEGDSKDQQQSLFGSAGNSKGVVCKGCIKQTYYCSSECMDSDHER-HSLECEVV--------RHLPGITAMHSTDYALMRLVLGVLVNRHLETVATMPSTRTPTEFVFDLVSHRKTCDPKWLACVEACADDFAQYLPEHLSIPASEIVTLACRINS----NSHAMVDPTGNTNQEVGVGMFPMVAMLNHACAPNCSFVSTTHGRMIVRTLRDVQAGEELCVTYV 278
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: A0A7S1V479_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V479_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 5.510e-11 Identity = 65/232 (28.02%), Postives = 105/232 (45.26%), Query Frame = 1 Query: 34 GEVVVEEEAVA-SVPMDQLRTCAGCLRSFGAPEDLKRCGCCRVVGYCCEECQRKDWENGHNVECAVFAKS-------WKKRRKRIPPTRYEALLPLLGERNEPRLLEIDT-SPLELFVSLEDHCEDA------NLTQKAQWHALAMVVGEVMGIGG-EEKGVDGLDGR---RLLGDWDCTLESLWLGLFPKVALMNHACDANCSVSFREGGRVVVRTIRRVKCGEPLTITYI 672 G V+ +A S+ +D TCA C F P L RC C+ + YC ECQ KD+ H ECA +K W+ LL GE + + + D + ++ V H D N Q + +LA V+ +V+ + ++G+ R G + ++ G++P AL+NH+CD NC + +REG + + T+R ++ GE LT +Y+ Sbjct: 33 GTVISRNPPLAHSLLVDLESTCAYC---FAKPPKLFRCSKCQTLRYCGRECQSKDFAQ-HKWECAYRSKRNGCSGGRWEDSTAEQHHQELILLLRTYGELQQCKKRKRDQCTKIDDLVQCGSHHWDEMVLAPKNREQSLTYSSLASVLTDVLPNSWLNPQHIEGVLRRFQANNFGIVNAMHATIGQGVYPHGALLNHSCDPNCLLRYREGTTMEIVTLRPIEAGEELTHSYV 260
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: A0A507E2R6_9FUNG (SET domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507E2R6_9FUNG) HSP 1 Score: 71.2 bits (173), Expect = 1.050e-10 Identity = 72/267 (26.97%), Postives = 110/267 (41.20%), Query Frame = 1 Query: 1 RGVVAQREFVSGEVVVEEEAVASV----PMDQLRTCAGCLRS-------------FGAPEDLKRC---GCCRVVGYCCEECQRKDWENGHNVECAVFAKSWKKRRKRIP------PTRYEALLPLLGERNEPRLLEIDT-----SPLELFVSLEDH----------CEDANLTQKAQW--HALAMVVGEVMGIGGEEKGVDGLDGRRLLGDWDCTLESLWLGLFPKVALMNHACDANCSVSFREGGRVVVRTIRRVKCGEPLTITYI 672 R V+A G +VV EE+ A V MD+L C C+R FG+ + K GC + YC EC D E H++EC V + +P T Y + +LG L + T +P E L H C +A Q+ L++ E++ + + ++ T + + +G+FP VA++NHAC NCS GR++VRT+R V+ GE L +TY+ Sbjct: 27 RHVMASESLPKGTLVVSEESAAFVLLKASMDEL--CLRCVRPLDEGDSKGQQQSLFGSAGNSKGVVCGGCIKQTYYCSSECMNSDHER-HSLECEVV--------RHLPGITAMHSTDYALMRLVLGVLVNRYLETVATMPSTRTPTEFVFDLVSHRKTCDPKWLACVEACADDFVQYLPEHLSIPASEIVTLACRINS----NSHAMVDPTGNTNQEVGVGMFPMVAMLNHACAPNCSFVSTTHGRMIVRTLRDVEAGEELCVTYV 278
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: T0S3J6_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S3J6_SAPDV) HSP 1 Score: 70.5 bits (171), Expect = 1.740e-10 Identity = 67/247 (27.13%), Postives = 107/247 (43.32%), Query Frame = 1 Query: 1 RGVVAQREFVSGEVVVEEEAVASVPMDQLRT--CAGCLRSFGAPEDLKRCGCCRVVGYCCEECQRKDWENGHNVEC------AVFAKSWKKRRKRIPPTRYEALLPLLGERNEPRLLEI-DTSPLELFVSLED----HCEDANLTQ------KAQWHALAMVVGEVMGIGGEEKGVDGLDGRRLLGDWDCTLESLW---LGLFPKVALMNHACDANCSVSFR-EGGRVVVRTIRRVKCGEPLTITYI 672 R + A ++ G +++ A+V L T C C P L RC C++V YC + CQ DW H +EC V A ++ + R L+ NEPR L+ T P +L S D H A + Q L + G ++G+G ++ + R ++ T E L G +P A++NH+CDANC+V+F + + +R +R + GE +T Y+ Sbjct: 14 RWIAATKDVAPGTLLLTSMPFATVLSPSLWTERCQACFE----PGSLARCARCKLVYYCSKGCQLSDWRLQHKLECPRLERLVVTANAYSVVADALLIARTLRLVSASPAPNEPRNLDARSTHPYDLVWSEADRAAVHATAAIVDQTDLLPSSTTTLRLKPLTGAMLGMGYTVSDIEEMLCRFHTNNFTITDEILLDIGSGCYPWGAMVNHSCDANCTVTFAPKSHELQMRALRPIAAGEEVTHAYM 256
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: B3RNQ6_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RNQ6_TRIAD) HSP 1 Score: 69.7 bits (169), Expect = 3.200e-10 Identity = 58/234 (24.79%), Postives = 106/234 (45.30%), Query Frame = 1 Query: 1 RGVVAQREFVSGEVVVEEEAVASV-PMDQLRT-CAGCLRSFGAPEDLKRCGCCRVVGYCCEECQRKDWENGHNVECAVFAKSWKKRRKRIPPTRYEAL----LPLLGERNEPRLLEIDTSPLELFVSLEDHC--EDANLTQKAQWHALAMVVGEVMGIGGEEKGVDGLDGRRLLGDWDCTLESLWLGLFPKVALMNHACDANCSVSFREGGRVVVRTIRRVKCGEPLTITYIPP 678 RG+ +++ G V +E V D L + C CL +L +C C+++ YCC+ CQ++DW+ H EC + K +PP L +L ++ + S EL + + NL ++ + +A+ E++ I + ++++ +G++P ++L+NH+C NCS +FR G ++ +R I K G+ L I+YI P Sbjct: 21 RGIRCKKQLAIGTSVGKENPFCHVVSQDMLSSYCHSCLLM---QSELYKCSRCKIIMYCCKSCQKEDWQ-WHKYECKSITRLGPK----VPPDSIRLLGRVAYTILQGQDRADQFKFLLSNRELLEGSRKNTIVDGINLLKEYLSNKVAINENEIIEIISRVT-------CNTFTICNSEMQTVGIGVYPGLSLVNHSCSPNCSATFR-GKQMQLRIIENTKIGDELLISYIDP 238 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86969.20221.1 >prot_M-pyrifera_M_contig86969.20221.1 ID=prot_M-pyrifera_M_contig86969.20221.1|Name=mRNA_M-pyrifera_M_contig86969.20221.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=229bp RGVVAQREFVSGEVVVEEEAVASVPMDQLRTCAGCLRSFGAPEDLKRCGCback to top mRNA from alignment at M-pyrifera_M_contig86969:33..836+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86969.20221.1 ID=mRNA_M-pyrifera_M_contig86969.20221.1|Name=mRNA_M-pyrifera_M_contig86969.20221.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=804bp|location=Sequence derived from alignment at M-pyrifera_M_contig86969:33..836+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86969:33..836+ >mRNA_M-pyrifera_M_contig86969.20221.1 ID=mRNA_M-pyrifera_M_contig86969.20221.1|Name=mRNA_M-pyrifera_M_contig86969.20221.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1374bp|location=Sequence derived from alignment at M-pyrifera_M_contig86969:33..836+ (Macrocystis pyrifera P11B4 male)back to top |