prot_M-pyrifera_M_contig8695.20215.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8695.20215.1
Unique Nameprot_M-pyrifera_M_contig8695.20215.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length374
Homology
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BLAST of mRNA_M-pyrifera_M_contig8695.20215.1 vs. uniprot
Match: A0A6H5J5T1_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5T1_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 1.970e-35
Identity = 76/119 (63.87%), Postives = 84/119 (70.59%), Query Frame = 0 
Query:    2 TPSASSTRDFLWALGVVLSRGVSEEDVGGAGLVPYLEFANHGNIPGGGPEGGXXXXXXXXXXXGGGRATASCVRGFDKTTGSHYLRALRDVGPGEEFLIDYGSAKKSTYQFVRSYGFVN 120
            +PSAS+TRDFLWALGV+LSRGVSEE  GG GLVPYL+FANHG+   GG  GG             G   ASC RGFD  TG H LRALRD+ PGEE LIDYGSA K  Y+F R+YGFVN
Sbjct:  236 SPSASTTRDFLWALGVILSRGVSEEGAGGVGLVPYLDFANHGD---GGKGGGVAL----------GDGGASCERGFDAATGRHVLRALRDIAPGEELLIDYGSAAKGAYRFARTYGFVN 341
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BLAST of mRNA_M-pyrifera_M_contig8695.20215.1 vs. uniprot
Match: D7G0R8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R8_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 6.330e-22
Identity = 57/94 (60.64%), Postives = 63/94 (67.02%), Query Frame = 0 
Query:    1 ATPSASSTRDFLWALGVVLSRGVSEEDVGGAGLVPYLEFANHGNIPGGGPEGGXXXXXXXXXXXGGGRATASCVRGFDKTTGSHYLRALRDVGP 94
            A+PSAS+T DFLWALGV+LSRGVSEE  GG GLVPYL+FANHG+   GG  GG             G   ASC RGFD  TG H LRALRD+ P
Sbjct:  242 ASPSASTTTDFLWALGVILSRGVSEEGAGGVGLVPYLDFANHGD---GGRGGGVAL----------GDGGASCERGFDPATGRHVLRALRDIAP 322
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8695.20215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J5T1_9PHAE1.970e-3563.87SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G0R8_ECTSI6.330e-2260.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1410.10coord: 1..118
e-value: 5.2E-10
score: 41.0
NoneNo IPR availablePANTHERPTHR13271UNCHARACTERIZED PUTATIVE METHYLTRANSFERASEcoord: 9..371
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 8..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8695contigM-pyrifera_M_contig8695:229..3073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8695.20215.1mRNA_M-pyrifera_M_contig8695.20215.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8695 229..3073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8695.20215.1 ID=prot_M-pyrifera_M_contig8695.20215.1|Name=mRNA_M-pyrifera_M_contig8695.20215.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=374bp
ATPSASSTRDFLWALGVVLSRGVSEEDVGGAGLVPYLEFANHGNIPGGGP
EGGGVGAGGIEGGGGGGRATASCVRGFDKTTGSHYLRALRDVGPGEEFLI
DYGSAKKSTYQFVRSYGFVNAPPSTSGGGNAGRGQRGSNSDSIRGGGGSD
STPEDATHPGPAASSEGSGTGGTALPSFSVELKLGDARNALDSLVSSGSE
VGSEGQFSATAGAMVGSLSAEKDPAVVADDAAESAAAGIPASAASAGGAE
AAVSAAPEAPTAPAAAAATSSSAATSQATAPSQETARRATTAAAAAGADA
AAMCAALDERLRRYSTTLEQDLEVLQRFSFEQEQEQGQEQEREQAASHRA
VTSEWVKTCVSVRAAEKLALRRAL
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