mRNA_M-pyrifera_M_contig86906.20209.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86906.20209.1 vs. uniprot
Match: A0A5A8DLR7_CAFRO (Sialidase domain-containing protein n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8DLR7_CAFRO) HSP 1 Score: 207 bits (528), Expect = 1.250e-62 Identity = 115/222 (51.80%), Postives = 140/222 (63.06%), Query Frame = 1 Query: 1 PPGVAVFEAGKEGYDCYRIPAIVGLGSSGVLEVGGTLVAFAEGRKFSCADHDWNDIVVKRSTDGGVSWGALSVAYSNSSASHHVTLGNPAPVVLSDGRLVLFFCRDNKEVFFGVSEDAGLSWSAWTEITSQVVGLDWSWVATGPPGSIQLPNGRVVVAADHISASAGSGSHVFYSDDMVS-FHLGTLLEQGNECQAAALPGGGALLAMRPQSGEEGRGFAWS 663 PPGVAVF AG GY C+RIPA+V LG G L+AFAE RK SC+DH W D+VV+ S+D G SWG + S S VT GNPAPV L +G ++L +CR+N++VF S+D G +W+ IT + WSWVATGPPGSI+LPNG VVV +DH S+ GSH D + L LL+QGNECQAA L G LL MRP+S GR FA S Sbjct: 27 PPGVAVFGAGMGGYSCFRIPALVALGD-------GKLLAFAEARKLSCSDHGWVDLVVRSSSDSGRSWGGIQRVVSESREGALVTDGNPAPVALRNGSVLLPYCRNNRQVFVVRSDDEGRTWTDPQNITDESTDPSWSWVATGPPGSIELPNGDVVVPSDHRGPSS-QGSHTLRLDRASGRWRLQQLLDQGNECQAALLSNGSTLLGMRPRSKTTGRLFALS 240
BLAST of mRNA_M-pyrifera_M_contig86906.20209.1 vs. uniprot
Match: A9V8Z4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V8Z4_MONBE) HSP 1 Score: 202 bits (513), Expect = 1.060e-60 Identity = 103/204 (50.49%), Postives = 134/204 (65.69%), Query Frame = 1 Query: 16 VFEAGKEGYDCYRIPAIVGLGSSGVLEVGGTLVAFAEGRKFSCADHDWNDIVVKRSTDGGVSWGALSVAYSNSSASHHVTLGNPAPVVLSDGRLVLFFCRDNKEVFFGVSEDAGLSWSAWTEITSQVVGLDWSWVATGPPGSIQLPNGRVVVAADHISASAGSGSHVFYSDDM-VSFHLGTLLEQGNECQAAALPGGGALLAMR 624 VFE GKEGY CYRIP++V LG + +AFAEGRKFSC DH WNDIV K S+DGG +W AL+V Y SS ++T+GNPAPVVL DG L+L FCR+N+ + S D G +W + ++++ +V W + ATGPPGSIQL GR++V ADH S S + S YSDD ++ G ++ GNECQA LP G ++ MR Sbjct: 20 VFEGGKEGYFCYRIPSLVQLGPD-------SYIAFAEGRKFSCEDHGWNDIVAKTSSDGGQTWSALAVVYGESSTKANITIGNPAPVVLHDGTLLLVFCRNNQAMLLLNSTDGGQTWGGFRDVSAGIVDPTWPFFATGPPGSIQLHTGRILVPADHTSGS--TQSMAIYSDDYGQTWTRGAMIPDGNECQAVELPDGTVMMNMR 214
BLAST of mRNA_M-pyrifera_M_contig86906.20209.1 vs. uniprot
Match: A0A7S3X1L3_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X1L3_EMIHU) HSP 1 Score: 159 bits (403), Expect = 3.930e-44 Identity = 103/226 (45.58%), Postives = 130/226 (57.52%), Query Frame = 1 Query: 10 VAVFEAGKEGYDCYRIPAIVGLGSSGVLEVGGTLVAFAEGRK-FSCADHDWNDIVVKRSTDGGVSWGALSVAYSNSSASHHVTLGNPAPVVLSDGRLVLFFCRDNKEVFFGVSEDA-GLSW-SAWTEITSQVVGLDW-SWVATGPPGSIQLPNGRVVVAADHISASAGSG--SHVFYSDD--MVSFHLGTLLEQGNECQAAALPGGGALLAMRPQSGEEGRGFAWS 663 V VF+AG+EGY C+RIP+++ L S G + FAEGRK C DH W DIV+K S D G +WG L Y S+ + HVT+GNPAPVV + GR+VL FCRDN+ + S DA G W SA +IT +G +WVATGPPG I LP GR+VV A+ SA G + SDD + H + GNE Q AA P G +L R G + R +WS Sbjct: 22 VTVFQAGEEGYKCFRIPSLLRLPS-------GAIALFAEGRKTLGCLDHGWVDIVIKVSEDNGTTWGPLRKVYGESNETAHVTIGNPAPVV-AGGRVVLLFCRDNRAIMVLSSLDADGREWPSAPVDITLPALGTSKPTWVATGPPGGIVLPGGRIVVEANWRSAETGGADVASALTSDDGGLSWSHGADPVPNGNEGQVAAAPNGSLVLNAR--EGGDSRLLSWS 237
BLAST of mRNA_M-pyrifera_M_contig86906.20209.1 vs. uniprot
Match: A0A7S4PH87_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PH87_9EUKA) HSP 1 Score: 154 bits (388), Expect = 1.600e-41 Identity = 88/205 (42.93%), Postives = 116/205 (56.59%), Query Frame = 1 Query: 10 VAVFEAGKEGYDCYRIPAIVGLGSSGVLEVGGTLVAFAEGRKFSCADHDWNDIVVKRSTDGGVSWGALSVAYSNSSASHHVTLGNPAPVVLSDGRLVLFFCRDNKEVFFGVSEDAGLSWSAWTEITSQVVGLDWSWVATGPPGSIQLPNGRVVVAADHI-------SASAGSGSHVFYSDDMVSFHLGT---LLEQGNECQAAAL 594 V VF G +GY CY+IP+++ L S G L+AFAE RK SC+D W D+V K S DGG +W +L YSNSS S V +GN APV L G++V+ FCR+N++VF S D G++W+ I+S W WV TGPPGS+QL +GRV+ + H G + DD ++ LG L NECQAA L Sbjct: 25 VDVFNKGDDGYFCYKIPSLLALQS-------GKLLAFAEARKQSCSDFAWTDLVYKVSLDGGRNWSSLYTLYSNSSNSEKVVIGNAAPVQLRSGKIVVPFCRNNRDVFVMSSSDEGVTWTQPRNISSTARERSWRWVGTGPPGSLQLSSGRVITPSYHTLPFTPPEDGELSEGHVMISDDDGDTWSLGGNWGLHYSSNECQAAEL 222
BLAST of mRNA_M-pyrifera_M_contig86906.20209.1 vs. uniprot
Match: A0A2M7L1J2_9BACT (Exo-alpha-sialidase n=1 Tax=Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 TaxID=1973912 RepID=A0A2M7L1J2_9BACT) HSP 1 Score: 152 bits (384), Expect = 4.400e-41 Identity = 100/226 (44.25%), Postives = 127/226 (56.19%), Query Frame = 1 Query: 1 PPGVAVFEAGKEGYDCYRIPAIVGLGSSGVLEVGGTLVAFAEGRKFSCADHDWNDIVVKRSTDGGVSWGALSVAYSNSSASHHVTLGNPAPVV-LSDGRLVLFFCRDNKEVFFGVSEDAGLSWSAWTEITSQVVGLDWSWVATGPPGSIQLPNG----RVVVAADHISASAGSG---SHVFYSDDM-VSFHLGTLLEQG-NECQAAALPGGGALLAMRPQSGEEGR 648 P AVF +GKEGY +RIP+++ + GT++AF EGRK S DH D+V+KRS DGG +WG L V Y A+ VTLGNP PVV + G + L FCRDNKEV S D GL+WS ++T +V DW W ATGP IQL +G R+V+ DH G SHVF SDD ++ LG ++ +ECQ L G LL MR G G+ Sbjct: 12 PQQEAVFTSGKEGYHTFRIPSLL-------VTKKGTVLAFCEGRKTSADDHGDLDLVLKRSADGGNTWGPLQVVYEEGGAAP-VTLGNPCPVVDQNTGTIWLTFCRDNKEVLVTSSIDDGLTWSKPVDLTKEVKSPDWGWYATGPGVGIQLRHGPHAGRLVIPCDHREKDDGEWIMHSHVFLSDDAGKTWRLGGSADKHTDECQVVELTDGTLLLNMRNYWGTTGK 229
BLAST of mRNA_M-pyrifera_M_contig86906.20209.1 vs. uniprot
Match: A0A2E8FCW2_9PLAN (Glycosyl hydrolase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8FCW2_9PLAN) HSP 1 Score: 149 bits (375), Expect = 1.210e-39 Identity = 100/225 (44.44%), Postives = 126/225 (56.00%), Query Frame = 1 Query: 1 PPGVAVFEAGKEGYDCYRIPAIVGLGSSGVLEVGGTLVAFAEGRKFSCADHDWNDIVVKRSTDGGVSWGALSVAYSNSSASHHVTLGNPAPVV-LSDGRLVLFFCRDNKEVFFGVSEDAGLSWSAWTEITSQVVGLDWSWVATGPPGSIQLPNGR----VVVAADHISASAGSG---SHVFYSDDM-VSFHLGTLLEQG-NECQAAALPGGGALLAMRPQSGEEG 645 P VFEAG+EGY +RIPA + + GTL+AF EGRK + +DH D+V+KRS DGG +WG L + Y + +T+GNP PV+ S GRL L FCR+NK+V S D G +W+ EIT V DWSWVATGP IQL +GR +V+ D S G SHVFYSDD S+ LG LE+ +ECQ G L+ R G G Sbjct: 22 PARSVVFEAGREGYFSFRIPAAI-------VTSKGTLLAFCEGRKTTRSDHGDLDLVLKRSRDGGKTWGPLELVYEEGGKAK-ITIGNPCPVIDQSTGRLWLPFCRNNKQVLMTHSSDDGRTWAKPVEITRAVTRPDWSWVATGPGVGIQLQHGRHKGRLVIPCDQGIVSEGRRVMYSHVFYSDDHGKSWVLGGRLEKHTDECQVIERTDGTLLMNARNYWGRSG 238
BLAST of mRNA_M-pyrifera_M_contig86906.20209.1 vs. uniprot
Match: A0A7V2IK98_9BACT (Exo-alpha-sialidase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7V2IK98_9BACT) HSP 1 Score: 149 bits (377), Expect = 7.490e-39 Identity = 93/210 (44.29%), Postives = 120/210 (57.14%), Query Frame = 1 Query: 16 VFEAGKEGYDCYRIPAIVGLGSSGVLEVGGTLVAFAEGRKFSCADHDWNDIVVKRSTDGGVSWGALSVAYSNSSASHHVTLGNPAPVV-LSDGRLVLFFCRDNKEVFFGVSEDAGLSWSAWTEITSQVVGLDWSWVATGPPGSIQLPNG----RVVVAADHISASAGSGSHVFYSDDMVSFHLGT--LLEQGNECQAAALPGGGALLAMR 624 VF +G EGY YRIPA++ + G L+AF EGRK S ADH DIV+KRS DGG +WG L + Y + +T+GNP PV+ GR+ L FCRDN+ VF G S+D G +WS EIT V DW+W ATGP IQL +G R+V+ +DH + G GSH+ YSDD + ++ NECQ L G + MR Sbjct: 54 VFVSGTEGYHTYRIPALL-------VAANGDLLAFCEGRKTSSADHGDVDIVLKRSLDGGRTWGPLELLYEEGDTAT-ITIGNPCPVLDRRTGRIWLPFCRDNRRVFVGYSDDHGKTWSPRREITDTVADPDWTWYATGPGVGIQLAHGEHAGRLVIPSDHRD-TYGYGSHMVYSDDGGETWTRSEPIIPGCNECQVVELADGVLMNNMR 254
BLAST of mRNA_M-pyrifera_M_contig86906.20209.1 vs. uniprot
Match: A0A1M4U0Y9_9BACT (Sialidase-1 n=2 Tax=Mariniphaga anaerophila TaxID=1484053 RepID=A0A1M4U0Y9_9BACT) HSP 1 Score: 144 bits (362), Expect = 1.420e-37 Identity = 98/234 (41.88%), Postives = 125/234 (53.42%), Query Frame = 1 Query: 10 VAVFEAGKEGYDCYRIPAIVGLGSSGVLEVGGTLVAFAEGRKFSCADHDWNDIVVKRSTDGGVSWGALSVAYSNSSASHHVTLGNPAPVVLS-DGRLVLFFC----------------RDNKEVFFGVSEDAGLSWSAWTEITSQVVGLDWSWVATGPPGSIQLPNG----RVVVAADHISASAGSG---SHVFYSDDM-VSFHLGTLLEQG----NECQAAALPGGGALLAMR 624 +A+FE G+EGY CYRIPAI+ S GTL+AFAEGRK+ CAD D+VVKRSTD G SW LS+ + + S T GNPAPVV G+++L +D + VF S+D G+SW+ EITS V W W ATGP IQ+ G R+V+ D+IS + G SHV YSDD S+ LG + + NE A L G +L MR Sbjct: 42 IALFEKGQEGYSCYRIPAIIRSKS-------GTLLAFAEGRKYGCADEGDIDLVVKRSTDNGKSWSNLSIVWDDGSN----TCGNPAPVVDEVTGKIILLMTWNNGEDHIGEINDGSSKDTRRVFVTTSDDDGVSWTEPYEITSAVKESTWGWYATGPCHGIQIKKGNYAGRLVIPCDNISLKSEGGKGHSHVIYSDDGGESWQLGNNVPENEYNPNESTVAELSNGDLMLNMR 264
BLAST of mRNA_M-pyrifera_M_contig86906.20209.1 vs. uniprot
Match: A0A518DTH8_9BACT (Sialidase n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518DTH8_9BACT) HSP 1 Score: 142 bits (357), Expect = 4.990e-37 Identity = 100/237 (42.19%), Postives = 120/237 (50.63%), Query Frame = 1 Query: 1 PPGVAVFEAGKEGYDCYRIPAIVGLGSSGVLEVGGTLVAFAEGRKFSCADHDWNDIVVKRSTDGGVSWGALSVAYSNSSASHHVTLGNPAPVV-LSDGRLVLFFCRDNKEVFFGVSEDAGLSWSAWTEITSQVVGLDWSWVATGPPGSIQLP----NGRVVVAADHISASAGSG-----SHVFYSDDMVSFHLGTLLEQG------NECQAAALPGGGALLAMRPQSGEEGRGFAWS 663 P + VF AG+EGY +RIPAI+ GG L+AF EGRK DH D+V+KRS+DGG +WG L + Y VT+GNP PVV S G + L F RDN+EV S D G +WS +IT+ V DW W A GP +IQL GR+V+ DH GS SHVFYSDD H T G NEC G LL MR G+ R A S Sbjct: 31 PELIDVFTAGQEGYHTFRIPAII-------TAPGGDLLAFCEGRKTGRGDHGDLDLVLKRSSDGGRTWGPLQLVYEEG-GDKKVTIGNPCPVVDQSTGVIWLPFNRDNREVLVTSSSDQGKTWSKPRDITADVKASDWDWYACGPGNAIQLTVGKHAGRLVIPCDHRVRGQGSWDAAGRSHVFYSDD----HGKTWQRGGATDFAMNECAVVQRSDGQLLLNMRSYRGKNCRAVALS 255
BLAST of mRNA_M-pyrifera_M_contig86906.20209.1 vs. uniprot
Match: A0A1R0LUL4_9ACTN (Alpha-sialidase n=1 Tax=Streptomyces sp. IMTB 2501 TaxID=1776340 RepID=A0A1R0LUL4_9ACTN) HSP 1 Score: 140 bits (352), Expect = 2.210e-36 Identity = 101/243 (41.56%), Postives = 122/243 (50.21%), Query Frame = 1 Query: 19 FEAGKEGYDCYRIPAIVGLGSSGVLEVGGTLVAFAEGRKFSCADHDWNDIVVKRSTDGGVSWGALSVAYSNSSASHHVTLGNPAPVVLSDGRLVLFFCR------------------DNKEVFFGVSEDAGLSWSAWTEITSQVVGLDWSWVATGPPGSIQLPNGRVVVAADHISASAGS---------GSHVFYSDDM-VSFHLGTLLEQG------NECQAAALPGGGALLAMRPQSGEEG 645 F AG+EGY +RIPA+V G+ GTL+AF EGR S ADH DIV++RS DGG SWG L VA SN H+ GNPAPVVL GR++L R D + V+ S+D G+SWSA EIT+QV W W AT P ++QL GRV+V A+H G H SDD S+HLG + E NE AAALP G R S G Sbjct: 8 FRAGQEGYASFRIPAVVVTGA-------GTLLAFCEGRSGSAADHGQIDIVLRRSADGGRSWGPLQVAASNGD---HLA-GNPAPVVLDTGRILLVHIRAAASATEDAILRGRVEDADGRRVWVRHSDDDGMSWSAPKEITAQVKRPGWRWYATTPGHALQLTGGRVLVPANHTLPPTGGDIGTEAKYHSGHCLLSDDRGESWHLGYVDENTGGYINVNETTAAALPDGRVYFNTRNDSRSPG 239 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86906.20209.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86906.20209.1 >prot_M-pyrifera_M_contig86906.20209.1 ID=prot_M-pyrifera_M_contig86906.20209.1|Name=mRNA_M-pyrifera_M_contig86906.20209.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=221bp PPGVAVFEAGKEGYDCYRIPAIVGLGSSGVLEVGGTLVAFAEGRKFSCADback to top mRNA from alignment at M-pyrifera_M_contig86906:177..839+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86906.20209.1 ID=mRNA_M-pyrifera_M_contig86906.20209.1|Name=mRNA_M-pyrifera_M_contig86906.20209.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=663bp|location=Sequence derived from alignment at M-pyrifera_M_contig86906:177..839+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86906:177..839+ >mRNA_M-pyrifera_M_contig86906.20209.1 ID=mRNA_M-pyrifera_M_contig86906.20209.1|Name=mRNA_M-pyrifera_M_contig86906.20209.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1326bp|location=Sequence derived from alignment at M-pyrifera_M_contig86906:177..839+ (Macrocystis pyrifera P11B4 male)back to top |