prot_M-pyrifera_M_contig86903.20207.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86903.20207.1
Unique Nameprot_M-pyrifera_M_contig86903.20207.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length212
Homology
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BLAST of mRNA_M-pyrifera_M_contig86903.20207.1 vs. uniprot
Match: A0A2E2C255_9PLAN (Uncharacterized protein n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E2C255_9PLAN)

HSP 1 Score: 205 bits (521), Expect = 1.790e-63
Identity = 108/216 (50.00%), Postives = 137/216 (63.43%), Query Frame = 0 
Query:    1 MKLKRDELLLFYLPVTCLFLLSPTVFSPWWKTNLSGPLILVLVISFVFGLLLKRR-------TASTDNSRSKLEIIRLVIQSEFQIGQSPDDLQTVIQQAAGSWTIKVSELAGEGMAFLECERHPAPQSENDYPTGELLVDSGEIWFRDSSLDTKTFQLVDWQAGDPSIRLMFDADQQVRAIVIRPPYGDGAYRFKKSKTGFQLELIPDVFSINES 209
            MKL R+E LLFYLP+ CLFLL P  F+  WKT LSGPLIL + IS + G++L  R            + R   E IRL I  + QIGQ+ DD QTVI+ + GS+ I V EL GEG+A LEC  +   +   +    E+LVDSG+IW RDS L T++++L  WQ  D S+RL+ DADQQVR +VI PPYGDG Y   K  TGF LELIP + S  ++
Sbjct:    1 MKLNRNEFLLFYLPLACLFLLIPGAFNTLWKTYLSGPLILAMAISIITGIVLNLRRNRIPQDVIGQQSLRKMPETIRLTIHKDLQIGQTDDDTQTVIKGSGGSYKITVYELPGEGIALLECVLNNQIKPVTNIIPSEILVDSGQIWIRDSELATQSYELAVWQTEDSSMRLIVDADQQVRGVVINPPYGDGGYSLWKDATGFVLELIPGIHSAEKA 216
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86903.20207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2E2C255_9PLAN1.790e-6350.00Uncharacterized protein n=1 Tax=Gimesia sp. TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..8
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..211
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 9..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..52
NoneNo IPR availableTMHMMTMhelixcoord: 34..52
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86903contigM-pyrifera_M_contig86903:199..834 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86903.20207.1mRNA_M-pyrifera_M_contig86903.20207.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86903 199..834 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86903.20207.1 ID=prot_M-pyrifera_M_contig86903.20207.1|Name=mRNA_M-pyrifera_M_contig86903.20207.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=212bp
MKLKRDELLLFYLPVTCLFLLSPTVFSPWWKTNLSGPLILVLVISFVFGL
LLKRRTASTDNSRSKLEIIRLVIQSEFQIGQSPDDLQTVIQQAAGSWTIK
VSELAGEGMAFLECERHPAPQSENDYPTGELLVDSGEIWFRDSSLDTKTF
QLVDWQAGDPSIRLMFDADQQVRAIVIRPPYGDGAYRFKKSKTGFQLELI
PDVFSINESSI*
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