mRNA_M-pyrifera_M_contig86900.20206.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86900.20206.1
Unique NamemRNA_M-pyrifera_M_contig86900.20206.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig86900.20206.1 vs. uniprot
Match: A0A5A8DYP9_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DYP9_CAFRO)

HSP 1 Score: 284 bits (726), Expect = 1.000e-83
Identity = 152/282 (53.90%), Postives = 190/282 (67.38%), Query Frame = 1
Query:    1 CYGSGGSFRLSFDGELSEPILWNAPLSATGDGDSVEEKLQGIAALKDVVVA---ATG-SQSVACRGYDTSTDTPPDAFAVTFSTVRGFKGDLPELEADVEGLVGTKYVNVTESVQGVAKLSGFFRVAFRGHWTARIPYDATLNEMETALENLATVDDVDVSLVSSSTDYPGANARAWGVTFVGDTVGGDVPVMTVDASDLLGNGANVRVCRGGRTCDGIVTNHGNKLSGAFRLSLRGHSTVEIPHDASDTTVKAALEALPNIGSVSVTRRGPGSVGDYEWAV 834
            C   GGSF+L F G  + PI W+APL +TG+GDSV+E L+ +  +  V VA   ATG SQ+VACRG+D++T T P+A  V F +V G +GD P LEADV+GL G + ++V E  QG A LSG F + FRG  T  I +DA    ++ ALE L+++D VDVS V  S D+P + ARA+ VTFVG  VGGDVP M  DAS + GNGA V VC GG  CDG  T  GN++SG FRL+L GH++  IP DA+DTTVKA LEALPN+G VSV RRGP     Y W V
Sbjct:  662 CDAVGGSFKLRFRGHTTSPIRWDAPLQSTGNGDSVQEALERLDTVTTVSVAMSSATGVSQTVACRGFDSATSTAPEAMLVEFVSVPGVEGDAPMLEADVQGLQGNRRIDVAEVRQGAALLSGTFALEFRGEKTNAIAFDAPAAAVKAALEQLSSIDTVDVSAVDPSLDFPDSGARAYVVTFVGPAVGGDVPAMRGDASRMTGNGAAVLVCAGGMVCDGHTTQDGNEVSGDFRLALMGHTSDPIPFDAADTTVKARLEALPNVGVVSVQRRGPSPQAGYSWEV 943          
BLAST of mRNA_M-pyrifera_M_contig86900.20206.1 vs. uniprot
Match: A0A5A8CWJ7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CWJ7_CAFRO)

HSP 1 Score: 284 bits (726), Expect = 1.010e-83
Identity = 152/282 (53.90%), Postives = 190/282 (67.38%), Query Frame = 1
Query:    1 CYGSGGSFRLSFDGELSEPILWNAPLSATGDGDSVEEKLQGIAALKDVVVA---ATG-SQSVACRGYDTSTDTPPDAFAVTFSTVRGFKGDLPELEADVEGLVGTKYVNVTESVQGVAKLSGFFRVAFRGHWTARIPYDATLNEMETALENLATVDDVDVSLVSSSTDYPGANARAWGVTFVGDTVGGDVPVMTVDASDLLGNGANVRVCRGGRTCDGIVTNHGNKLSGAFRLSLRGHSTVEIPHDASDTTVKAALEALPNIGSVSVTRRGPGSVGDYEWAV 834
            C   GGSF+L F G  + PI W+APL +TG+GDSV+E L+ +  +  V VA   ATG SQ+VACRG+D++T T P+A  V F +V G +GD P LEADV+GL G + ++V E  QG A LSG F + FRG  T  I +DA    ++ ALE L+++D VDVS V  S D+P + ARA+ VTFVG  VGGDVP M  DAS + GNGA V VC GG  CDG  T  GN++SG FRL+L GH++  IP DA+DTTVKA LEALPN+G VSV RRGP     Y W V
Sbjct:  829 CDAVGGSFKLRFRGHTTSPIRWDAPLQSTGNGDSVQEALERLDTVTTVSVAMSSATGVSQTVACRGFDSATSTAPEAMLVEFVSVPGVEGDAPMLEADVQGLQGNRRIDVAEVRQGAALLSGTFALEFRGEKTNAIAFDAPAAAVKAALEQLSSIDTVDVSAVDPSLDFPDSGARAYVVTFVGPAVGGDVPAMRGDASRMTGNGAAVLVCAGGMVCDGHTTQDGNEVSGDFRLALMGHTSDPIPFDAADTTVKARLEALPNVGVVSVQRRGPSPQAGYSWEV 1110          
BLAST of mRNA_M-pyrifera_M_contig86900.20206.1 vs. uniprot
Match: A0A5A8EGP9_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EGP9_CAFRO)

HSP 1 Score: 284 bits (726), Expect = 1.010e-83
Identity = 152/282 (53.90%), Postives = 190/282 (67.38%), Query Frame = 1
Query:    1 CYGSGGSFRLSFDGELSEPILWNAPLSATGDGDSVEEKLQGIAALKDVVVA---ATG-SQSVACRGYDTSTDTPPDAFAVTFSTVRGFKGDLPELEADVEGLVGTKYVNVTESVQGVAKLSGFFRVAFRGHWTARIPYDATLNEMETALENLATVDDVDVSLVSSSTDYPGANARAWGVTFVGDTVGGDVPVMTVDASDLLGNGANVRVCRGGRTCDGIVTNHGNKLSGAFRLSLRGHSTVEIPHDASDTTVKAALEALPNIGSVSVTRRGPGSVGDYEWAV 834
            C   GGSF+L F G  + PI W+APL +TG+GDSV+E L+ +  +  V VA   ATG SQ+VACRG+D++T T P+A  V F +V G +GD P LEADV+GL G + ++V E  QG A LSG F + FRG  T  I +DA    ++ ALE L+++D VDVS V  S D+P + ARA+ VTFVG  VGGDVP M  DAS + GNGA V VC GG  CDG  T  GN++SG FRL+L GH++  IP DA+DTTVKA LEALPN+G VSV RRGP     Y W V
Sbjct:  829 CDAVGGSFKLRFRGHTTSPIRWDAPLQSTGNGDSVQEALERLDTVTTVSVAMSSATGVSQTVACRGFDSATSTAPEAMLVEFVSVPGVEGDAPMLEADVQGLQGNRRIDVAEVRQGAALLSGTFALEFRGEKTNAIAFDAPAAAVKAALEQLSSIDTVDVSAVDPSLDFPDSGARAYVVTFVGPAVGGDVPAMRGDASRMTGNGAAVLVCAGGMVCDGHTTQDGNEVSGDFRLALMGHTSDPIPFDAADTTVKARLEALPNVGVVSVQRRGPSPQAGYSWEV 1110          
BLAST of mRNA_M-pyrifera_M_contig86900.20206.1 vs. uniprot
Match: A0A5A8DTS9_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DTS9_CAFRO)

HSP 1 Score: 284 bits (726), Expect = 1.010e-83
Identity = 152/282 (53.90%), Postives = 190/282 (67.38%), Query Frame = 1
Query:    1 CYGSGGSFRLSFDGELSEPILWNAPLSATGDGDSVEEKLQGIAALKDVVVA---ATG-SQSVACRGYDTSTDTPPDAFAVTFSTVRGFKGDLPELEADVEGLVGTKYVNVTESVQGVAKLSGFFRVAFRGHWTARIPYDATLNEMETALENLATVDDVDVSLVSSSTDYPGANARAWGVTFVGDTVGGDVPVMTVDASDLLGNGANVRVCRGGRTCDGIVTNHGNKLSGAFRLSLRGHSTVEIPHDASDTTVKAALEALPNIGSVSVTRRGPGSVGDYEWAV 834
            C   GGSF+L F G  + PI W+APL +TG+GDSV+E L+ +  +  V VA   ATG SQ+VACRG+D++T T P+A  V F +V G +GD P LEADV+GL G + ++V E  QG A LSG F + FRG  T  I +DA    ++ ALE L+++D VDVS V  S D+P + ARA+ VTFVG  VGGDVP M  DAS + GNGA V VC GG  CDG  T  GN++SG FRL+L GH++  IP DA+DTTVKA LEALPN+G VSV RRGP     Y W V
Sbjct:  829 CDAVGGSFKLRFRGHTTSPIRWDAPLQSTGNGDSVQEALERLDTVTTVSVAMSSATGVSQTVACRGFDSATSTAPEAMLVEFVSVPGVEGDAPMLEADVQGLQGNRRIDVAEVRQGAALLSGTFALEFRGEKTNAIAFDAPAAAVKAALEQLSSIDTVDVSAVDPSLDFPDSGARAYVVTFVGPAVGGDVPAMRGDASRMTGNGAAVLVCAGGMVCDGHTTQDGNEVSGDFRLALMGHTSDPIPFDAADTTVKARLEALPNVGVVSVQRRGPSPQAGYSWEV 1110          
BLAST of mRNA_M-pyrifera_M_contig86900.20206.1 vs. uniprot
Match: A0A5A8E3K0_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E3K0_CAFRO)

HSP 1 Score: 165 bits (417), Expect = 2.450e-42
Identity = 112/305 (36.72%), Postives = 152/305 (49.84%), Query Frame = 1
Query:    1 CYGSGGSFRLSFDGELSEPILWNAPLSATGDGDSVEEKLQGIAALKDVVVAATGSQSVACRGYDTSTDTPPDAFAVTF-----STVRGFKGDLPELEADVEGLVGTKYVNVTESVQGVAKLSGFFRVAFRGHWTARIPYDATLNEMETALENLATVDDVDVSLVSSSTDYPGANARAWGVTFVGDTVGGDVPVMTV-DASDLLGNGANVRVCRGGRTCDGIVTNH---------------------GNKLSGAFRLSLRGHSTVEIPHDASDTTVKAALEALPNIGSVSVTRRGPGSVGDYEWAV 834
            C  +GG+F LS  G          P+        V+  L  +  L  V VAA+G+Q+ ACR +D ++ T P  F VT      S + G  GD+P L  D   L G + ++V+ESV+G A +SG   V+FRG     +    +  ++   L  L++++ V VS  ++    PG  A A+ VTF      G+VP +TV DAS L+GN A   VC      D                           GN++ G FRL LRGH T  IP +A+DTTVKAALEALPN+G+VSV R GP  V  Y W V
Sbjct:  882 CDATGGTFSLSVGGRPPSTETSTGPIPFDATPAQVQAALNAVPVLSGVTVAASGAQTTACRAFDAASSTAPLPFLVTIPAAVGSGLAGSAGDVPALVGDASSLTGNRVISVSESVKGTAAVSGTVSVSFRGAVPVSVNTGMSGAQVAAELVKLSSIEGVSVSKEAA----PGG-ATAFLVTFTAPR--GNVPALTVEDASALVGNDATXTVCSDETVTDSPADGAAAAVAARCAALGSTLLAQVVGGNRVGGEFRLRLRGHVTDPIPFNAADTTVKAALEALPNVGTVSVARSGPTDVAGYSWTV 1179          
BLAST of mRNA_M-pyrifera_M_contig86900.20206.1 vs. uniprot
Match: A0A5A8EDT7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EDT7_CAFRO)

HSP 1 Score: 165 bits (417), Expect = 2.450e-42
Identity = 112/305 (36.72%), Postives = 152/305 (49.84%), Query Frame = 1
Query:    1 CYGSGGSFRLSFDGELSEPILWNAPLSATGDGDSVEEKLQGIAALKDVVVAATGSQSVACRGYDTSTDTPPDAFAVTF-----STVRGFKGDLPELEADVEGLVGTKYVNVTESVQGVAKLSGFFRVAFRGHWTARIPYDATLNEMETALENLATVDDVDVSLVSSSTDYPGANARAWGVTFVGDTVGGDVPVMTV-DASDLLGNGANVRVCRGGRTCDGIVTNH---------------------GNKLSGAFRLSLRGHSTVEIPHDASDTTVKAALEALPNIGSVSVTRRGPGSVGDYEWAV 834
            C  +GG+F LS  G          P+        V+  L  +  L  V VAA+G+Q+ ACR +D ++ T P  F VT      S + G  GD+P L  D   L G + ++V+ESV+G A +SG   V+FRG     +    +  ++   L  L++++ V VS  ++    PG  A A+ VTF      G+VP +TV DAS L+GN A   VC      D                           GN++ G FRL LRGH T  IP +A+DTTVKAALEALPN+G+VSV R GP  V  Y W V
Sbjct:  882 CDATGGTFSLSVGGRPPSTETSTGPIPFDATPAQVQAALNAVPVLSGVTVAASGAQTTACRAFDAASSTAPLPFLVTIPAAVGSGLAGSAGDVPALVGDASSLTGNRVISVSESVKGTAAVSGTVSVSFRGAVPVSVNTGMSGAQVAAELVKLSSIEGVSVSKEAA----PGG-ATAFLVTFTAPR--GNVPALTVEDASALVGNDATXTVCSDETVTDSPADGAAAAVAARCAALGSTLLAQVVGGNRVGGEFRLRLRGHVTDPIPFNAADTTVKAALEALPNVGTVSVARSGPTDVAGYSWTV 1179          
BLAST of mRNA_M-pyrifera_M_contig86900.20206.1 vs. uniprot
Match: A0A5A8DUD1_CAFRO (Uncharacterized protein n=11 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DUD1_CAFRO)

HSP 1 Score: 165 bits (417), Expect = 2.450e-42
Identity = 112/305 (36.72%), Postives = 152/305 (49.84%), Query Frame = 1
Query:    1 CYGSGGSFRLSFDGELSEPILWNAPLSATGDGDSVEEKLQGIAALKDVVVAATGSQSVACRGYDTSTDTPPDAFAVTF-----STVRGFKGDLPELEADVEGLVGTKYVNVTESVQGVAKLSGFFRVAFRGHWTARIPYDATLNEMETALENLATVDDVDVSLVSSSTDYPGANARAWGVTFVGDTVGGDVPVMTV-DASDLLGNGANVRVCRGGRTCDGIVTNH---------------------GNKLSGAFRLSLRGHSTVEIPHDASDTTVKAALEALPNIGSVSVTRRGPGSVGDYEWAV 834
            C  +GG+F LS  G          P+        V+  L  +  L  V VAA+G+Q+ ACR +D ++ T P  F VT      S + G  GD+P L  D   L G + ++V+ESV+G A +SG   V+FRG     +    +  ++   L  L++++ V VS  ++    PG  A A+ VTF      G+VP +TV DAS L+GN A   VC      D                           GN++ G FRL LRGH T  IP +A+DTTVKAALEALPN+G+VSV R GP  V  Y W V
Sbjct:  882 CDATGGTFSLSVGGRPPSTETSTGPIPFDATPAQVQAALNAVPVLSGVTVAASGAQTTACRAFDAASSTAPLPFLVTIPAAVGSGLAGSAGDVPALVGDASSLTGNRVISVSESVKGTAAVSGTVSVSFRGAVPVSVNTGMSGAQVAAELVKLSSIEGVSVSKEAA----PGG-ATAFLVTFTAPR--GNVPALTVEDASALVGNDATXTVCSDETVTDSPADGAAAAVAARCAALGSTLLAQVVGGNRVGGEFRLRLRGHVTDPIPFNAADTTVKAALEALPNVGTVSVARSGPTDVAGYSWTV 1179          
BLAST of mRNA_M-pyrifera_M_contig86900.20206.1 vs. uniprot
Match: D0N2H9_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N2H9_PHYIT)

HSP 1 Score: 156 bits (394), Expect = 2.850e-39
Identity = 117/286 (40.91%), Postives = 161/286 (56.29%), Query Frame = 1
Query:   10 SGGSFRLSFDGELSEPILWNAPLSATGDGDSVEEKLQGIAALKDVVVAATGSQSVACRGYDTSTDTPPDAFAVTFSTVRGFKGDLPELEADVEGLVGTKYVNVTESVQGVAKLSGFFRVAF-RGHW--TARIPYDATLNEMETALENLATVDDVDVSLVSSSTDYPGANA----RAWGVTFVGDTVGGDVPVMTV-DASDLL-GNGANVRVCRGGRTCDGIV--TNHGNKLSGAFRLSLRGHSTVEIPHDASDTTVKAALEALPNIGSVSVTRRGPGSVGDYEWAV 834
            S G+F L+F GE + PI    P S T D   ++  L+ + A+  V VA  G Q+ ACR   TS  T    F VTF++V G++GD+P L  +   L G + ++VTES +G A +SG F++ + RG    T  + Y+A    ++ AL  L    D  +++V +    P ANA    R W VTF      G VP M V  A++LL GNGA + V     T D  V  +  GN++SG F++ L GH+T  I HDASDTTVK+ LEALPN+G+VSVTR  P    +Y W V
Sbjct:  949 STGTFTLTFGGETTAPI----PASQT-DVLKIKAVLEELNAITTVTVAFYGGQTTACRPCPTSGCT--SGFKVTFTSVVGYQGDMPLLTGNTFDLEGNRRLDVTESTKGQAPVSGTFKLTYLRGKDADTVALQYNAPAATVQAALVAL----DSSMTIVVTDGTLPPANAAKGERLWRVTFQNS---GYVPDMLVRPANNLLQGNGAGILVYTRSATPDPTVPVSVGGNRVSGYFKVQLGGHTTERISHDASDTTVKSKLEALPNVGTVSVTRSTPSLKNEYSWTV 1220          
BLAST of mRNA_M-pyrifera_M_contig86900.20206.1 vs. uniprot
Match: A0A8J5MA48_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MA48_9STRA)

HSP 1 Score: 155 bits (393), Expect = 3.880e-39
Identity = 113/286 (39.51%), Postives = 161/286 (56.29%), Query Frame = 1
Query:   10 SGGSFRLSFDGELSEPILWNAPLSATGDGDSVEEKLQGIAALKDVVVAATGSQSVACRGYDTSTDTPPDAFAVTFSTVRGFKGDLPELEADVEGLVGTKYVNVTESVQGVAKLSGFFRVAF-RGHW--TARIPYDATLNEMETALENLATVDDVDVSLVSSSTDYPGANA----RAWGVTFVGDTVGGDVPVMTV-DASDLL-GNGANVRVCRGGRTCDGIV--TNHGNKLSGAFRLSLRGHSTVEIPHDASDTTVKAALEALPNIGSVSVTRRGPGSVGDYEWAV 834
            S G+F  +F GE + PI      ++  D   ++  L+ + A+  V VA  G Q+ ACR   T+  T    F VTF++V G++GD+P L A+   L G + V+VTES +G A +SG F++ + RG    T  + Y+A    ++ ALE L T   + + +   ++  P AN     R W V F      G VP + V  A++LL GNGA + V   G T D +V  +  GN++SG F+L+L GH+T  I HDASDTTVK+ LEALPN G+VSVTR  P    +Y W V
Sbjct:  952 STGTFSFTFAGETTAPIQ-----ASQTDVLKIKAVLEELNAITTVSVAFYGGQTTACRPCPTTGCT--SGFKVTFTSVVGYQGDMPLLTANTYDLEGNRRVDVTESTKGQAPVSGTFKLTYLRGKDADTVALQYNAPAATVQAALEALDT--SMSILVTDGTSSLPPANVAKGERLWRVAFQNS---GYVPDLLVRPANNLLQGNGAGIVVYTQGATPDPVVPVSVGGNRVSGYFKLTLGGHTTERISHDASDTTVKSKLEALPNAGTVSVTRSTPSLKNEYSWTV 1225          
BLAST of mRNA_M-pyrifera_M_contig86900.20206.1 vs. uniprot
Match: A0A329SB27_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SB27_9STRA)

HSP 1 Score: 155 bits (391), Expect = 7.160e-39
Identity = 112/286 (39.16%), Postives = 161/286 (56.29%), Query Frame = 1
Query:   10 SGGSFRLSFDGELSEPILWNAPLSATGDGDSVEEKLQGIAALKDVVVAATGSQSVACRGYDTSTDTPPDAFAVTFSTVRGFKGDLPELEADVEGLVGTKYVNVTESVQGVAKLSGFFRVAF-RGHW--TARIPYDATLNEMETALENLATVDDVDVSLVSSSTDYPGANA----RAWGVTFVGDTVGGDVPVMTV-DASDLL-GNGANVRVCRGGRTCDGIV--TNHGNKLSGAFRLSLRGHSTVEIPHDASDTTVKAALEALPNIGSVSVTRRGPGSVGDYEWAV 834
            S G+F  +F GE + PI      ++  D   ++  L+ + A+  V VA  G Q+ ACR    +  T    F VTF++V G++GD+P L A+   L G + V+VTES +G A +SG F++ + RG    T  + Y+A    ++ ALE L T   + + +   ++  P AN     R W V F      G VP + V  A++LL GNGA + V   G T D +V  +  GN++SG F+L+L GH+T  I HDASDTTVK+ LEALPN+G+VSVTR  P    +Y W V
Sbjct:  910 STGTFSFTFAGETTAPIQ-----ASQTDVLKIKAVLEELNAITTVSVAFYGGQTTACRPCPITGCT--SGFKVTFTSVVGYQGDMPLLTANTYDLEGNRRVDVTESTKGQAPVSGTFKLTYLRGKDADTVALQYNAPAATVQAALEALDT--SMSILVTDGTSSLPPANVAKGERLWRVAFQNS---GYVPDLLVRPANNLLQGNGAGIVVYTRGTTPDPVVPVSVGGNRVSGYFKLTLGGHTTERISHDASDTTVKSKLEALPNVGTVSVTRSTPSLKNEYSWTV 1183          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86900.20206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DYP9_CAFRO1.000e-8353.90Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8CWJ7_CAFRO1.010e-8353.90Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8EGP9_CAFRO1.010e-8353.90Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8DTS9_CAFRO1.010e-8353.90Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8E3K0_CAFRO2.450e-4236.72Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8EDT7_CAFRO2.450e-4236.72Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8DUD1_CAFRO2.450e-4236.72Uncharacterized protein n=11 Tax=Cafeteria roenber... [more]
D0N2H9_PHYIT2.850e-3940.91Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
A0A8J5MA48_9STRA3.880e-3939.51Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A329SB27_9STRA7.160e-3939.16Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86900contigM-pyrifera_M_contig86900:6..839 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score156.0
Seed ortholog evalue2.6e-35
Seed eggNOG ortholog4787.PITG_04980T0
KEGG koko:K12567
KEGG Pathwayko05410,ko05414,map05410,map05414
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PA14
EggNOG OGs3QF4W@4776,KOG0613@1,KOG0613@2759
EC2.7.11.1
COG Functional cat.Z
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131,ko04147,ko04812
Exons1
Model size834
Cds size834
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816778.2389288-CDS-M-pyrifera_M_contig86900:5..8391622816778.2389288-CDS-M-pyrifera_M_contig86900:5..839Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86900 6..839 +
1692278173.016594-CDS-M-pyrifera_M_contig86900:5..8391692278173.016594-CDS-M-pyrifera_M_contig86900:5..839Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86900 6..839 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86900.20206.1prot_M-pyrifera_M_contig86900.20206.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86900 6..839 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86900.20206.1

>prot_M-pyrifera_M_contig86900.20206.1 ID=prot_M-pyrifera_M_contig86900.20206.1|Name=mRNA_M-pyrifera_M_contig86900.20206.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=278bp
CYGSGGSFRLSFDGELSEPILWNAPLSATGDGDSVEEKLQGIAALKDVVV
AATGSQSVACRGYDTSTDTPPDAFAVTFSTVRGFKGDLPELEADVEGLVG
TKYVNVTESVQGVAKLSGFFRVAFRGHWTARIPYDATLNEMETALENLAT
VDDVDVSLVSSSTDYPGANARAWGVTFVGDTVGGDVPVMTVDASDLLGNG
ANVRVCRGGRTCDGIVTNHGNKLSGAFRLSLRGHSTVEIPHDASDTTVKA
ALEALPNIGSVSVTRRGPGSVGDYEWAV
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mRNA from alignment at M-pyrifera_M_contig86900:6..839+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86900.20206.1 ID=mRNA_M-pyrifera_M_contig86900.20206.1|Name=mRNA_M-pyrifera_M_contig86900.20206.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig86900:6..839+ (Macrocystis pyrifera P11B4 male)
TGTTATGGGTCGGGGGGTTCGTTTCGCTTGTCATTTGATGGTGAACTCTC CGAACCAATTTTGTGGAATGCTCCATTGAGTGCAACAGGGGATGGTGATT CTGTCGAAGAGAAATTGCAAGGAATTGCTGCATTGAAGGATGTGGTGGTT GCAGCAACTGGATCACAATCTGTGGCTTGCCGTGGGTATGATACTTCCAC CGACACTCCTCCTGATGCTTTTGCAGTGACCTTTTCTACGGTTCGTGGGT TCAAGGGTGATTTGCCAGAGCTGGAAGCAGATGTGGAAGGATTGGTTGGT ACCAAGTATGTAAACGTGACAGAATCCGTACAAGGTGTTGCAAAGTTGTC AGGATTCTTTCGTGTGGCCTTCCGTGGTCACTGGACTGCAAGGATTCCAT ATGATGCGACGTTGAATGAAATGGAAACTGCGCTTGAGAACCTCGCAACC GTTGATGATGTGGACGTGTCTCTCGTCAGCTCTTCCACCGATTACCCCGG CGCCAATGCACGGGCTTGGGGAGTGACGTTTGTTGGAGATACTGTGGGTG GAGATGTGCCGGTGATGACAGTGGATGCGTCCGACTTGCTCGGAAATGGA GCGAATGTGCGCGTGTGTCGTGGAGGAAGGACTTGCGACGGCATTGTGAC AAACCATGGAAACAAACTCTCTGGTGCATTCCGATTGTCTCTTCGTGGGC ATTCCACTGTGGAGATTCCGCATGACGCCTCCGACACCACAGTAAAAGCT GCCCTTGAAGCACTTCCCAACATTGGGAGTGTGAGTGTGACTCGACGTGG TCCTGGATCTGTAGGGGATTATGAATGGGCTGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86900:6..839+

>mRNA_M-pyrifera_M_contig86900.20206.1 ID=mRNA_M-pyrifera_M_contig86900.20206.1|Name=mRNA_M-pyrifera_M_contig86900.20206.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1668bp|location=Sequence derived from alignment at M-pyrifera_M_contig86900:6..839+ (Macrocystis pyrifera P11B4 male)
TGTTATGGGTCGGGGGGTTCGTTTCGCTTGTCATTTGATGGTGAACTCTC
CGAACCAATTTTGTGGAATGCTCCATTGAGTGCAACAGGGGATGGTGATT
CTGTCGAAGAGAAATTGCAAGGAATTGCTGCATTGAAGGATGTGGTGGTT
GCAGCAACTGGATCACAATCTGTGGCTTGCCGTGGGTATGATACTTCCAC
CGACACTCCTCCTGATGCTTTTGCAGTGACCTTTTCTACGGTTCGTGGGT
TCAAGGGTGATTTGCCAGAGCTGGAAGCAGATGTGGAAGGATTGGTTGGT
ACCAAGTATGTAAACGTGACAGAATCCGTACAAGGTGTTGCAAAGTTGTC
AGGATTCTTTCGTGTGGCCTTCCGTGGTCACTGGACTGCAAGGATTCCAT
ATGATGCGACGTTGAATGAAATGGAAACTGCGCTTGAGAACCTCGCAACC
GTTGATGATGTGGACGTGTCTCTCGTCAGCTCTTCCACCGATTACCCCGG
CGCCAATGCACGGGCTTGGGGAGTGACGTTTGTTGGAGATACTGTGGGTG
GAGATGTGCCGGTGATGACAGTGGATGCGTCCGACTTGCTCGGAAATGGA
GCGAATGTGCGCGTGTGTCGTGGAGGAAGGACTTGCGACGGCATTGTGAC
AAACCATGGAAACAAACTCTCTGGTGCATTCCGATTGTCTCTTCGTGGGC
ATTCCACTGTGGAGATTCCGCATGACGCCTCCGACACCACAGTAAAAGCT
GCCCTTGAAGCACTTCCCAACATTGGGAGTGTGAGTGTGACTCGACGTGG
TCCTGGATCTGTAGGGGATTATGAATGGGCTGTGTGTTATGGGTCGGGGG
GTTCGTTTCGCTTGTCATTTGATGGTGAACTCTCCGAACCAATTTTGTGG
AATGCTCCATTGAGTGCAACAGGGGATGGTGATTCTGTCGAAGAGAAATT
GCAAGGAATTGCTGCATTGAAGGATGTGGTGGTTGCAGCAACTGGATCAC
AATCTGTGGCTTGCCGTGGGTATGATACTTCCACCGACACTCCTCCTGAT
GCTTTTGCAGTGACCTTTTCTACGGTTCGTGGGTTCAAGGGTGATTTGCC
AGAGCTGGAAGCAGATGTGGAAGGATTGGTTGGTACCAAGTATGTAAACG
TGACAGAATCCGTACAAGGTGTTGCAAAGTTGTCAGGATTCTTTCGTGTG
GCCTTCCGTGGTCACTGGACTGCAAGGATTCCATATGATGCGACGTTGAA
TGAAATGGAAACTGCGCTTGAGAACCTCGCAACCGTTGATGATGTGGACG
TGTCTCTCGTCAGCTCTTCCACCGATTACCCCGGCGCCAATGCACGGGCT
TGGGGAGTGACGTTTGTTGGAGATACTGTGGGTGGAGATGTGCCGGTGAT
GACAGTGGATGCGTCCGACTTGCTCGGAAATGGAGCGAATGTGCGCGTGT
GTCGTGGAGGAAGGACTTGCGACGGCATTGTGACAAACCATGGAAACAAA
CTCTCTGGTGCATTCCGATTGTCTCTTCGTGGGCATTCCACTGTGGAGAT
TCCGCATGACGCCTCCGACACCACAGTAAAAGCTGCCCTTGAAGCACTTC
CCAACATTGGGAGTGTGAGTGTGACTCGACGTGGTCCTGGATCTGTAGGG
GATTATGAATGGGCTGTG
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