prot_M-pyrifera_M_contig10968.2020.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10968.2020.1
Unique Nameprot_M-pyrifera_M_contig10968.2020.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length525
Homology
BLAST of mRNA_M-pyrifera_M_contig10968.2020.1 vs. uniprot
Match: A0A6H5KQM0_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM0_9PHAE)

HSP 1 Score: 302 bits (773), Expect = 1.180e-92
Identity = 234/498 (46.99%), Postives = 279/498 (56.02%), Query Frame = 0
Query:    9 LSSRSPILRNIPSDPVPDRRSFGFSTSHHMPARYLSEG--RQSERQ-SPNPRSYTAQEMPAIYPHGYGYAVKEPFAYDDPGAPSRVPRQ----------SCRCQY-DCACSNNFSGVRSANSAPACHDSAEAPSSRWRK----DTITSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLACSA----------SLELSPAQAGKKSDWENLLGAVDLELRAQ-RAERVPEPPAARAVPRFDHXXXXXXADRSPLHHSSVGANRYLPSSSG--------LAASVSPDLGPRKPTHRRGGXXXXXXXMGVGDEVAGGGPAYSGSTADAACLLATLPQRMLDRASTSTATATPPPATFKPLQPLPPAASPAPA-------VFMSSPAVVSAVQGGSAPAPIRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGVEQQLNEISSGGCGKPFETAGAG 462
            ++  SPILRNIPSDP  DRRSF FS S  MP++YLSEG  RQ  R+ SP+P +YTA+E+PA+YPH YGY +   FA+ DP  P+   +Q          SCRCQ   C+C+++ S     +S+     S+E P + WR     D   +TA                               A+LA +           ++EL+ + + KKSDWENLLGAVDLELRAQ R++ VP+   A  VP   +      A    LH+     +   P  +G         AASVSP+ GP K      G  XXXXX             YSGSTADAACLLATLPQRMLDR                                     V +  PA+VSA   G    P+RVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDG+E+QLN+ISS   G+PF TAGAG
Sbjct:    5 IADTSPILRNIPSDPA-DRRSFEFSPSP-MPSQYLSEGTARQDHRRHSPSPHNYTAREVPALYPHRYGYNIGGSFAHSDPEVPAVAEKQQQQLAFKPTSSCRCQRRQCSCNSSPSETAQKDSS-----SSEPPHAMWRNSKGGDANMTTARPSFFHGEAPAQQPPAAVSVSAPSRSPSPSAAILAQNRQQHSSRVLPRTIELTSSPS-KKSDWENLLGAVDLELRAQQRSKFVPDSTPATPVPSHHYARAINAAH---LHYQHQPLDDAPPLLTGGGYTQQQRAAASVSPEFGPVKTAPAPAGRHXXXXXXXXXXXXXX--XXYSGSTADAACLLATLPQRMLDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGIMPPALVSA--SGPPVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISSVS-GRPFATAGAG 486          
BLAST of mRNA_M-pyrifera_M_contig10968.2020.1 vs. uniprot
Match: D8LFR4_ECTSI (Pathogenesis-related transcriptional factor and ERF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR4_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 6.340e-76
Identity = 207/487 (42.51%), Postives = 237/487 (48.67%), Query Frame = 0
Query:    9 LSSRSPILRNIPSDPVPDRRSFGFSTSHHMPARYLSEGRQSE---RQSPNPRSYTAQEMPAIYPHGYGYAVKEPFAYDDPGAPSRVPRQSCRCQYDCACSNNFSGVRSAN--------SAPACHDSAEAPSSRWRK----DTITSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLACSA----------SLELSPAQAGKKSDWENLLGAVDLELRAQ-RAERVPEPPAARAVPRFDHXXXXXXADRSPLHHSSVGANRYLPSSSGL------------------AASVSPDLGPRK--PTHRRGGXXXXXXXMGVGDEVAGGGPAYSGSTADAACLLATLPQRMLDRASTSTATATPPPATFKPLQPLPPAASPAPAVFMSSPAVVSAVQGGSAPAPIRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGVEQQLNEISS 449
            ++  SPILRNIPSDP  DRRSF FS S  MPA+YLSEG  S+   R SP+P SYTA+E+PA+YPH YGY +   FA+ DP  P  V +                              +A     S+E P + WR     D   +TA                               A+LA +           ++EL+ + A KKSDWENLLGAVDLELRAQ R+E VP+   A  VP   +      A    LHH     +   P  +G                   AASVSP+ GP K  P  R   XXXXXXX          GPAYSGSTADAACLLA                                                                SGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDG+E+QLN+ISS
Sbjct:    5 IADTSPILRNIPSDPA-DRRSFEFSPSP-MPAQYLSEGTASQDHRRHSPSPHSYTAREVPALYPHRYGYNMGGSFAHSDPQVPVAVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAQKDSSSSEPPHAMWRNSKGGDANMTTARPGLFHGEAPAQQPPAAVSVSAPSRSPSPSAAILAQNQQQHSSRVMPRTIELTSSPA-KKSDWENLLGAVDLELRAQQRSEFVPDSTPATPVPSHHYAHAINAAH---LHHQHQPLDDAPPLLTGXXXXXXXXXXXXYTQHQPAAASVSPEFGPIKTAPAARHXXXXXXXXXX-----XXXXGPAYSGSTADAACLLA----------------------------------------------------------------SGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISS 416          
BLAST of mRNA_M-pyrifera_M_contig10968.2020.1 vs. uniprot
Match: A0A835Z3I9_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I9_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.480e-26
Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 0
Query:  370 QASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLN 435
            QASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGV+DSE  AARAY+ +AL+HF  GAKLN
Sbjct:  227 QASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVYDSELQAARAYNDSALEHFGAGAKLN 292          
BLAST of mRNA_M-pyrifera_M_contig10968.2020.1 vs. uniprot
Match: D7FLT6_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT6_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 6.390e-26
Identity = 63/88 (71.59%), Postives = 71/88 (80.68%), Query Frame = 0
Query:  374 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGVEQQLNEISSGGCGKPFETAGA 461
            RRGP GQS FKGVCIT AG WRAVIY+ RKQKYLGVFDSEFDAARAYDAAA  H   G++LN PD +E++L E+S+   GKPF TAGA
Sbjct:  304 RRGPPGQSSFKGVCITPAGTWRAVIYVDRKQKYLGVFDSEFDAARAYDAAARVH-CPGSQLNNPDQIERELYELSAAD-GKPFATAGA 389          
BLAST of mRNA_M-pyrifera_M_contig10968.2020.1 vs. uniprot
Match: A0A6V1UZI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZI2_HETAK)

HSP 1 Score: 116 bits (291), Expect = 7.930e-26
Identity = 52/72 (72.22%), Postives = 67/72 (93.06%), Query Frame = 0
Query:  368 RVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDG 439
            RVQ++GRRGPRGQS+FKGVC+TRAGKWR+VIY+GRKQ YLGVF++E +AA+AYD +A+++F +GA LNFPDG
Sbjct:  137 RVQSAGRRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNFPDG 208          
BLAST of mRNA_M-pyrifera_M_contig10968.2020.1 vs. uniprot
Match: A0A7S3Y6J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J2_HETAK)

HSP 1 Score: 116 bits (291), Expect = 1.060e-25
Identity = 52/72 (72.22%), Postives = 67/72 (93.06%), Query Frame = 0
Query:  368 RVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDG 439
            RVQ++GRRGPRGQS+FKGVC+TRAGKWR+VIY+GRKQ YLGVF++E +AA+AYD +A+++F +GA LNFPDG
Sbjct:  150 RVQSAGRRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNFPDG 221          
BLAST of mRNA_M-pyrifera_M_contig10968.2020.1 vs. uniprot
Match: A0A6H5KY97_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY97_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 3.090e-25
Identity = 62/88 (70.45%), Postives = 73/88 (82.95%), Query Frame = 0
Query:  374 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGVEQQLNEISSGGCGKPFETAGA 461
            RRGP GQS FKGVCIT AG WRAVIY+ RKQKYLGVFDSEFDAARAYDAAA + +  G++LN PD +E++L+E+S+   GKPF TAGA
Sbjct:  421 RRGPPGQSSFKGVCITPAGTWRAVIYVDRKQKYLGVFDSEFDAARAYDAAA-RVYCPGSQLNNPDQIERELHELSAAD-GKPFATAGA 506          
BLAST of mRNA_M-pyrifera_M_contig10968.2020.1 vs. uniprot
Match: A0A835YVU4_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVU4_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 7.330e-17
Identity = 50/78 (64.10%), Postives = 54/78 (69.23%), Query Frame = 0
Query:  371 ASGRRGPRGQSRFKGVCITRAGKWRAVI-------------YIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLN 435
            A  RRGPRGQSRFKGVCITRAGKWRAVI             +IGR+QKYLGVFDSE  AA AY+ +A Q F   AKLN
Sbjct:  187 AKSRRGPRGQSRFKGVCITRAGKWRAVICEWLAAVAEFLHNHIGRRQKYLGVFDSEVQAAVAYNESAKQFFGAEAKLN 264          
BLAST of mRNA_M-pyrifera_M_contig10968.2020.1 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.210e-15
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0
Query:  383 FKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 436
            ++GVC+TR GKWRAVIY  RKQ YLGVF+SE DAA+A+D AA QHF + A +NF
Sbjct:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54          
BLAST of mRNA_M-pyrifera_M_contig10968.2020.1 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 3.470e-15
Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 0
Query:  374 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 436
            RRG +G+S ++GVC+TR GKWRAVIY  RKQ YLGVF+SE DAA+A+D AA  HF   A +NF
Sbjct:   22 RRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10968.2020.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQM0_9PHAE1.180e-9246.99AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
D8LFR4_ECTSI6.340e-7642.51Pathogenesis-related transcriptional factor and ER... [more]
A0A835Z3I9_9STRA2.480e-2686.36AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
D7FLT6_ECTSI6.390e-2671.59AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6V1UZI2_HETAK7.930e-2672.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6J2_HETAK1.060e-2572.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5KY97_9PHAE3.090e-2570.45AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A835YVU4_9STRA7.330e-1764.10AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CH07_9STRA2.210e-1566.67AP2/ERF domain-containing protein (Fragment) n=1 T... [more]
A0A836CI56_9STRA3.470e-1563.49AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 382..443
e-value: 8.9E-10
score: 48.5
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 381..426
e-value: 2.9E-5
score: 24.2
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 382..437
score: 13.762
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 381..438
e-value: 2.2E-12
score: 48.6
NoneNo IPR availablePANTHERPTHR32467FAMILY NOT NAMEDcoord: 367..436
NoneNo IPR availablePANTHERPTHR32467:SF94FLORAL HOMEOTIC PROTEIN APETALA 2coord: 367..436
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 381..438

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10968contigM-pyrifera_M_contig10968:2247..3821 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10968.2020.1mRNA_M-pyrifera_M_contig10968.2020.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10968 2247..3821 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10968.2020.1 ID=prot_M-pyrifera_M_contig10968.2020.1|Name=mRNA_M-pyrifera_M_contig10968.2020.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=525bp
LSPVLSPRLSSRSPILRNIPSDPVPDRRSFGFSTSHHMPARYLSEGRQSE
RQSPNPRSYTAQEMPAIYPHGYGYAVKEPFAYDDPGAPSRVPRQSCRCQY
DCACSNNFSGVRSANSAPACHDSAEAPSSRWRKDTITSTANQQQQQQRSQ
PCSSRSRVSAVQVPSRSPSPSAVLACSASLELSPAQAGKKSDWENLLGAV
DLELRAQRAERVPEPPAARAVPRFDHHHHHHHADRSPLHHSSVGANRYLP
SSSGLAASVSPDLGPRKPTHRRGGGGGGGGGMGVGDEVAGGGPAYSGSTA
DAACLLATLPQRMLDRASTSTATATPPPATFKPLQPLPPAASPAPAVFMS
SPAVVSAVQGGSAPAPIRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYI
GRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGVEQQLNEISSG
GCGKPFETAGAGGAAAARSSTPPAIEEGGGDAAVVAAAAGGGGGAARKRS
RKSTFGHHEDDEWVREGGPWKNRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf