prot_M-pyrifera_M_contig86890.20202.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86890.20202.1
Unique Nameprot_M-pyrifera_M_contig86890.20202.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length88
Homology
BLAST of mRNA_M-pyrifera_M_contig86890.20202.1 vs. uniprot
Match: A0A842NYW5_9ARCH (Alanyl-tRNA editing protein n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A842NYW5_9ARCH)

HSP 1 Score: 55.1 bits (131), Expect = 1.790e-7
Identity = 29/88 (32.95%), Postives = 50/88 (56.82%), Query Frame = 0
Query:    1 QPAAGALEKLQKAVDGLVAERSPVYSLTMGRAEAEAKYGDRVFDALKVPDSVKSLSLVYIPECNIACSPCKPAGNTAASGAITITKVR 88
            +P    + +++ A + ++ E   V    MGRAEAE ++GD V+D   +P+SV  LS+ +IP  N+     +   +T   G++TI+K R
Sbjct:   46 KPTEDEMRRVEDAANRVITEDVGVEEKVMGRAEAEERWGDLVYDLFPIPESVTELSICHIPGWNVNACNREHCSSTGKIGSLTISKYR 133          
BLAST of mRNA_M-pyrifera_M_contig86890.20202.1 vs. uniprot
Match: A0A0M0BLM7_9ARCH (Alanyl-tRNA editing protein AlaX n=1 Tax=miscellaneous Crenarchaeota group-15 archaeon DG-45 TaxID=1685127 RepID=A0A0M0BLM7_9ARCH)

HSP 1 Score: 53.9 bits (128), Expect = 5.150e-7
Identity = 30/84 (35.71%), Postives = 50/84 (59.52%), Query Frame = 0
Query:    7 LEKLQKAVDGLVAERSPVYSLTMGRAEAEAKYGDRVFDALKVPDSVKSLSLVYIPECNIACSPCKPAGN--TAASGAITITKVR 88
            L ++++  +  +AE +P+  L M RAEAEA++GD ++D   +P S+  L + +IP  N+  + C+ A    T   GA+ ITK R
Sbjct:   53 LARVEEEANAKIAEDAPIEELEMERAEAEARWGDAIYDLFPLPASITRLRIAHIPGWNV--NACREAHTETTGEIGALRITKTR 134          
BLAST of mRNA_M-pyrifera_M_contig86890.20202.1 vs. uniprot
Match: A0A1F5CNL2_9ARCH (Alanyl-tRNA editing protein AlaX n=1 Tax=Candidatus Bathyarchaeota archaeon RBG_16_57_9 TaxID=1797382 RepID=A0A1F5CNL2_9ARCH)

HSP 1 Score: 51.2 bits (121), Expect = 5.190e-6
Identity = 23/80 (28.75%), Postives = 48/80 (60.00%), Query Frame = 0
Query:    9 KLQKAVDGLVAERSPVYSLTMGRAEAEAKYGDRVFDALKVPDSVKSLSLVYIPECNIACSPCKPAGNTAASGAITITKVR 88
            ++ + VD  ++E +P+  L M R +AEA++GD ++D   +P+S+++L + ++P  N+          T   G +T++K+R
Sbjct:   52 EISRLVDQKISENAPIEVLEMTRRDAEARFGDLIYDKFPLPESIQTLRVFHLPGWNVNACNKTHTRTTGEIGKVTLSKMR 131          
BLAST of mRNA_M-pyrifera_M_contig86890.20202.1 vs. uniprot
Match: A0A8D5U4P1_9CREN (Alanyl-tRNA editing protein AlaX n=1 Tax=Stygiolobus sp. KN-1 TaxID=2824673 RepID=A0A8D5U4P1_9CREN)

HSP 1 Score: 48.5 bits (114), Expect = 5.800e-5
Identity = 26/69 (37.68%), Postives = 39/69 (56.52%), Query Frame = 0
Query:    1 QPAAGALEKLQKAVDGLVAERSPVYSLTMGRAEAEAKYGDRVFDALKVPDSVKSLSLVYIPECNI-ACS 68
            +P+   + K+ +  +  V E  P+    + R EAE KYGD ++D   VP  VK L ++ IPE NI AC+
Sbjct:   47 KPSEDDMNKVFELSNSKVVENLPIVIEELPREEAEKKYGDEIYDLFPVPQEVKVLKIIIIPEWNINACN 115          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86890.20202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A842NYW5_9ARCH1.790e-732.95Alanyl-tRNA editing protein n=1 Tax=Candidatus Bat... [more]
A0A0M0BLM7_9ARCH5.150e-735.71Alanyl-tRNA editing protein AlaX n=1 Tax=miscellan... [more]
A0A1F5CNL2_9ARCH5.190e-628.75Alanyl-tRNA editing protein AlaX n=1 Tax=Candidatu... [more]
A0A8D5U4P1_9CREN5.800e-537.68Alanyl-tRNA editing protein AlaX n=1 Tax=Stygiolob... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.54.20coord: 25..70
e-value: 6.3E-10
score: 40.5
IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilySUPERFAMILY55186ThrRS/AlaRS common domaincoord: 6..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86890contigM-pyrifera_M_contig86890:168..431 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86890.20202.1mRNA_M-pyrifera_M_contig86890.20202.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86890 168..431 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86890.20202.1 ID=prot_M-pyrifera_M_contig86890.20202.1|Name=mRNA_M-pyrifera_M_contig86890.20202.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=88bp
QPAAGALEKLQKAVDGLVAERSPVYSLTMGRAEAEAKYGDRVFDALKVPD
SVKSLSLVYIPECNIACSPCKPAGNTAASGAITITKVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018163Thr/Ala-tRNA-synth_IIc_edit