prot_M-pyrifera_M_contig86840.20198.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86840.20198.1
Unique Nameprot_M-pyrifera_M_contig86840.20198.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length127
Homology
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BLAST of mRNA_M-pyrifera_M_contig86840.20198.1 vs. uniprot
Match: A0A0D2WM03_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WM03_CAPO3)

HSP 1 Score: 64.7 bits (156), Expect = 1.360e-9
Identity = 42/137 (30.66%), Postives = 63/137 (45.99%), Query Frame = 0 
Query:    1 FNLEWSPGGDFLIASLESGVVVVLDTFHPDGLHRVCRFMAHENGTNVMSFDSEGRLFTGGVDGVARMWDFSKLCAARGDLESEE----------GGGITQFGLLREFVGHEDDVKNVCPLGSSILLTCSFDGTLRAW 127
            +NLE++PGG+ L+A+  +G  ++LD      + RV      E G NV+ F +E    TGG D   ++WD  K C +     +E              + +   L+E  GH   VKNV       L+T   D T+R W
Sbjct:  161 YNLEFTPGGECLVATASNGAFLLLDPRTYSEVGRVSNAHGGE-GVNVVRFLNERVFATGGDDFSVKLWDLRKCCRSTSSQPNEARFVQTATTPAASLMDRVTPLQELRGHHGWVKNVEIARDGRLVTAGMDNTIRLW 296
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86840.20198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0D2WM03_CAPO31.360e-930.66Uncharacterized protein n=2 Tax=Capsaspora owczarz... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 90..127
e-value: 9.3
score: 10.9
coord: 31..69
e-value: 0.0014
score: 27.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 93..127
e-value: 0.0036
score: 18.1
coord: 40..69
e-value: 0.047
score: 14.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 97..127
score: 9.172
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 38..71
score: 9.506
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..127
e-value: 3.7E-18
score: 67.7
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 56..70
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..127
score: 12.025
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86840contigM-pyrifera_M_contig86840:145..525 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86840.20198.1mRNA_M-pyrifera_M_contig86840.20198.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86840 145..525 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86840.20198.1 ID=prot_M-pyrifera_M_contig86840.20198.1|Name=mRNA_M-pyrifera_M_contig86840.20198.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
FNLEWSPGGDFLIASLESGVVVVLDTFHPDGLHRVCRFMAHENGTNVMSF
DSEGRLFTGGVDGVARMWDFSKLCAARGDLESEEGGGITQFGLLREFVGH
EDDVKNVCPLGSSILLTCSFDGTLRAW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf