mRNA_M-pyrifera_M_contig86836.20195.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86836.20195.1
Unique NamemRNA_M-pyrifera_M_contig86836.20195.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig86836.20195.1 vs. uniprot
Match: A0A7S1G8C7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G8C7_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.040e-20
Identity = 70/216 (32.41%), Postives = 115/216 (53.24%), Query Frame = 1
Query:   10 VYTLLARASDGLALVAEESVEGVGSGGASSELREEAGRVGASLADHGEGARLLVDSGDRRYFFSCLRLRGVAFVAVATRGYPKEAAGAFLEDVAQDFWAYAQTQLPVEWSRMLESVSAPHKWVRFDRMIERRRKALVDPTSASGAARVKAHVDEIRGYMSENIEALIERGEAMGDLRARSERLAEDAKKLKLSAHQLNACTKLQPYAIPAGISLLV 657
            V T LAR  DG+ LVA  S+E   S  +  E + +A  +   L      A++ +DSG   + F  +   GV F+ +  R YPK  A A+L D+   F +  Q +    W   +++   P+K+++FD+ I+R+RKA  DP S   AAR+   + +I   M +NI  +++RGE + ++   S RLA ++ K +  A +LNA   L+ +A     +L+V
Sbjct:    3 VLTFLARVVDGMLLVA--SMEQSSSEASHREHKHQAKLLLKRLNSRSP-AKMSIDSGS--HVFHYIIEDGVCFLTLCARDYPKRLAFAYLADIHGGFVSELQREHGPAWRSRIDTADRPYKFIKFDKYIQRQRKAYADPRSRDNAARLNDDLTDITAIMRKNIAEVLDRGEQLENVSRISSRLATESDKFRWQAKRLNALEWLKKHAPAVAAALIV 213          
BLAST of mRNA_M-pyrifera_M_contig86836.20195.1 vs. uniprot
Match: D8LIZ8_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIZ8_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 2.140e-19
Identity = 65/218 (29.82%), Postives = 115/218 (52.75%), Query Frame = 1
Query:   10 VYTLLARASDGLALVAEESVEGVGSGGASSELREEAGRVGASLADHGEGARLLVDSGDRRYFFSCLRLRGVAFVAVATRGYPKEAAGAFLEDVAQDFWAYAQTQLPVEWSRMLESVSAPHKWVRFDRMIERRRKALVDPTSASGAARVKAHVDEIRGYMSENIEALIERGEAMGDLRARSERLAEDAKKLKLSAHQLNACTKLQPYAIPAGISLLVIL 663
            V T +AR  DGL LVA     G  S       R +A ++   L      A+  ++S  R Y F  +  +G+ ++ +A +GYPK  A  +LE++ Q+F    +     +W   +E+ + P+ +++FD++I+R+RK  +DP S +  AR+   + +I   M +NIE ++ RGE +  +   S+ L+  A++ K S+ +L+     Q Y  P G  ++ IL
Sbjct:    3 VLTFVARVMDGLLLVASMD-SGSDSAATVDVCRSQAKQILKRLNPRSV-AKCSIES--RPYVFHYMIEQGICYLTLAEKGYPKRLAFLYLEEIHQEFVGELRQDYGEDWRNKVETAARPYAFIKFDKVIQRKRKEFLDPQSRNNMARLNDDLADIHSIMKQNIEEVLNRGEKLDHVSEISKTLSTQAEQFKWSSKKLSLMALWQKYG-PIGAMVIAIL 215          
BLAST of mRNA_M-pyrifera_M_contig86836.20195.1 vs. uniprot
Match: A0A6G0WBK5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBK5_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 8.200e-19
Identity = 61/218 (27.98%), Postives = 117/218 (53.67%), Query Frame = 1
Query:   10 VYTLLARASDGLALVAEESVEGVGSGGASSELREEAGRVGASLADHGEGARLLVDSGDRRYFFSCLRLRGVAFVAVATRGYPKEAAGAFLEDVAQDFWAYAQTQLPVEWSRMLESVSAPHKWVRFDRMIERRRKALVDPTSASGAARVKAHVDEIRGYMSENIEALIERGEAMGDLRARSERLAEDAKKLKLSAHQLNACTKLQPYAIPAGISLLVIL 663
            + T LAR SDG+ LVA  S+E  G    + +  ++ G+      +    A+  +DSG   Y F  L   G+ ++ ++ R YPK  A  +L+D+ + F           W   + +V+ P+ +++FD++I+++RK   DP+S+   +++ + + +I   M +NI+ ++ RGEA+  +   S  +A+ +K+ K ++ +L+     Q YA  A + L V+L
Sbjct:    3 ILTFLARVSDGMLLVA--SMESAGDYSDNLDTYKQQGKQIMKKLNQRSPAKCSIDSG--AYAFHYLIEDGICYLTLSDRQYPKRLAFLYLDDIHRAFVDELARDHGDSWRDTVTTVARPYAFIKFDKVIQKKRKEYTDPSSSQNVSKLNSDLADIHNVMRQNIQEVLNRGEAIDRVSQISSNIADRSKEFKWASKKLSLQALYQKYAPLAAVGLFVVL 216          
BLAST of mRNA_M-pyrifera_M_contig86836.20195.1 vs. uniprot
Match: A0A485KKL0_9STRA (Aste57867_8523 protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485KKL0_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 4.380e-18
Identity = 61/218 (27.98%), Postives = 111/218 (50.92%), Query Frame = 1
Query:   10 VYTLLARASDGLALVAEESVEGVGSGGASSELREEAGRVGASLADHGEGARLLVDSGDRRYFFSCLRLRGVAFVAVATRGYPKEAAGAFLEDVAQDFWAYAQTQLPVEWSRMLESVSAPHKWVRFDRMIERRRKALVDPTSASGAARVKAHVDEIRGYMSENIEALIERGEAMGDLRARSERLAEDAKKLKLSAHQLNACTKLQPYAIPAGISLLVIL 663
            + T +AR SDG+ LVA  S+E  G    + +  ++ G+      +     +  +DSG   Y F  L   GV ++ ++ + YPK  A  +LED+   F    Q      W   + +V+ P+ +++FD+ I+++RK   DP+S+   +++   + +I   M +NI+ ++ RGEA+  +   S  +A+ +K+ K  A +L+     Q Y     I L V+L
Sbjct:    3 ILTFIARVSDGMLLVA--SMESAGDYSDNLDTYKQQGKQIMKKLNQRSPGKCSIDSGG--YSFHYLIEEGVCYLTLSDKNYPKRLAFLYLEDIHAGFIDELQRDHGDSWRDTVTTVARPYAFIKFDKFIQKKRKEYTDPSSSQNMSKLNNDLADIHNVMRQNIQEVLNRGEAIDRVSQISSNIADRSKEFKWGAKKLSLQAMYQKYGPLVAIGLFVVL 216          
BLAST of mRNA_M-pyrifera_M_contig86836.20195.1 vs. uniprot
Match: A0A835Z3W0_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W0_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 3.250e-17
Identity = 61/217 (28.11%), Postives = 118/217 (54.38%), Query Frame = 1
Query:   16 TLLARASDGLALVAEESVEGVGSGGASSEL-REEAGRVGASLADHGEGARLLVDSGDRRYFFSCLRLRGVAFVAVATRGYPKEAAGAFLEDVAQDFWAYAQTQLPVEWSRMLESVSAPHKWVRFDRMIERRRKALVDPTSASGAARVKAHVDEIRGYMSENIEALIERGEAMGDLRARSERLAEDAKKLKLSAHQLNACTKLQPYAIPAGISLLVIL 663
            T +AR  DGL LVA  S++ V     ++++ R +A ++   L    E    +V        F  +  +G+ ++ +  +GYPK  A  +LE++ + F    Q    ++W   +E+VS P+ +++FD++I+R+R+  +DP+S    AR+ + + +I   M +NI+ ++ RGE +  +   S+ LA  A++ K ++ +L+     Q YA    I L+V++
Sbjct:    5 TFVARVIDGLLLVA--SIDPVTESQEAADVYRSQAKQIIKQLNPRSEAKCSIVSE---PMMFHYMIEQGICYLTLTDKGYPKRLAFLYLEELHEAFIEELQRDHGMDWRTQVETVSRPYGFIKFDKVIQRKRREYLDPSSRDNMARLNSDLADIHDIMKKNIQEVLNRGERLDHVSQISKDLATQAEQFKWNSKKLSLMALWQKYAPMVAILLVVLI 216          
BLAST of mRNA_M-pyrifera_M_contig86836.20195.1 vs. uniprot
Match: A0A6V1P6Q6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6Q6_HETAK)

HSP 1 Score: 85.1 bits (209), Expect = 1.360e-16
Identity = 59/216 (27.31%), Postives = 108/216 (50.00%), Query Frame = 1
Query:   16 TLLARASDGLALVAEESVEGVGSGGASSEL---REEAGRVGASLADHGEGARLLVDSGDRRYFFSCLRLRGVAFVAVATRGYPKEAAGAFLEDVAQDFWAYAQTQLPVEWSRMLESVSAPHKWVRFDRMIERRRKALVDPTSASGAARVKAHVDEIRGYMSENIEALIERGEAMGDLRARSERLAEDAKKLKLSAHQLNACTKLQPYAIPAGISLL 654
            T +AR  DGL LVA      +G      ++   + +A ++   L      A+  +DSG  ++ F  +   G+ ++ +  +GYPK  A  +LE++ + F    Q     EW   +++VS P+ +++FD++I+ +RK   DP S     R+   + +I   M +NI+ +++RGE +  +   S +L +D+KK K    +L      Q Y     ++LL
Sbjct:    5 TFVARVMDGLILVASMDTSSMGDARGHEKIDMCKSDAKKILKKLNPRSV-AKCSIDSG--QFIFHYMIEDGICYLTLTDKGYPKRLAFLYLEEIHEAFVEELQRDEGSEWRSKVDTVSRPYYFIKFDKVIQLKRKDYADPESRGALRRLNNDLADIHTVMRKNIQEVLDRGERIDHVADVSRKLVDDSKKFKWGTKKLTLMALYQKYGPIGAVALL 217          
BLAST of mRNA_M-pyrifera_M_contig86836.20195.1 vs. uniprot
Match: S8F4J7_TOXGM (Synaptobrevin family protein n=19 Tax=Sarcocystidae TaxID=5809 RepID=S8F4J7_TOXGM)

HSP 1 Score: 84.0 bits (206), Expect = 3.480e-16
Identity = 67/209 (32.06%), Postives = 112/209 (53.59%), Query Frame = 1
Query:   16 TLLARASDGLALVAEESVEGVGSGGASSELREEAGRVGASLADHGEGA-RLLVDSGDRRYFFSCLRLRGVAFVAVATRGYPKEAAGAFLEDVAQDFWAYAQTQL---PVEWSRMLESVSAPHKWVRFDRMIERRRKALVDPTSASGAARVKAHVDEIRGYMSENIEALIERGEAMGDLRARSERLAEDAKKLKLSAHQLNACTKLQPYA 630
            T ++RASDGL L   ES +   +      L+++A +V   L   G G  R  +D+G  +Y +  L   GVAF+ V    YPK+ A +FLED+ + F    QT      V++  ++E++  P+ +V+FDR+I+R+++   DP S+    ++   + E+ G M  NIE +++RGE +     ++  L + + K K  A  L+    LQ YA
Sbjct:    5 TFVSRASDGLLLA--ESWDDATANPQLHALKQQAKQV---LKRIGHGPLRCSIDAGSYKYHY--LIADGVAFMTVCGGSYPKKLAFSFLEDIQRAFQEELQTSFGTHAVDYRSIIETIEKPYYFVKFDRVIQRKKQDYRDPDSSRALNKLNESLTEVTGIMRRNIEDILQRGENLEXXGKKAGDLKDASAKFKGLAKALSFRAMLQQYA 206          
BLAST of mRNA_M-pyrifera_M_contig86836.20195.1 vs. uniprot
Match: A0A812LTR8_SYMMI (Vesicle-trafficking protein SEC22b n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812LTR8_SYMMI)

HSP 1 Score: 82.4 bits (202), Expect = 4.610e-15
Identity = 61/217 (28.11%), Postives = 115/217 (53.00%), Query Frame = 1
Query:   16 TLLARASDGLALVAEESVEGVGSGGASSELREEAGRVGASLADHGEGARLLVDSGDRRYFFSCLRLRGVAFVAVATRGYPKEAAGAFLEDVAQDFWAYAQTQL---PVEWSRMLESVSAPHKWVRFDRMIERRRKALVDPTSASGAARVKAHVDEIRGYMSENIEALIERGEAMGDLRARSERLAEDAKKLKLSAHQLNACTKLQPYAIPAGISLLV 657
            T +AR+ DGL LV  E+ +   S   S +++++A ++   L  H    R  V+ G   + F      GV ++A+  +GYPK  A  FLED+   F    Q +     V++   +E++  P+ +++FDR I ++     DP S+   +++ +++ E+   M +NI+ +++RGE +  +  ++  + E++KK +    QL+  T LQ Y I   + L+V
Sbjct:   91 TFIARSLDGLILV--ETWDD--SNKVSKQIKDQAKQLLRKL--HNMPPRCSVE-GAGEFVFHYTMENGVCYMALFDKGYPKNLAFCFLEDIHMLFQQELQREFGTGSVDYRSHIETIEKPYYFIKFDRQITKKNTEYRDPKSSKALSKLNSNLQEVSNIMRQNIDEILKRGENLESVGRKANSIKEESKKFRSMTQQLSFQTMLQKYGIFVVVGLMV 300          
BLAST of mRNA_M-pyrifera_M_contig86836.20195.1 vs. uniprot
Match: UPI001F03354C (vesicle-trafficking protein SEC22b-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03354C)

HSP 1 Score: 80.5 bits (197), Expect = 5.730e-15
Identity = 57/219 (26.03%), Postives = 114/219 (52.05%), Query Frame = 1
Query:    7 IVYTLLARASDGLALVAEESVEGVGSGGASSELREEAGRVGASLADHGEGARLLVDSGDRRYFFSCLRLRGVAFVAVATRGYPKEAAGAFLEDVAQDFWAYAQTQLPVEWSRMLESVSAPHKWVRFDRMIERRRKALVDPTSASGAARVKAHVDEIRGYMSENIEALIERGEAMGDLRARSERLAEDAKKLKLSAHQLNACTKLQPYAIPAGISLLVIL 663
            ++ T++ RA+DGL L A    +   SG    E + +A ++   L+D     +  ++SG   + +  +   GV ++ +  + +P   A  FL+D++++FW          +S  + +V  P+ ++ FD  I++ RK  +D  S     R+   + +I+  + +NI+ +++RGEA+ +L  ++ +L + + K K  AH LN  T    YA  A + ++VI+
Sbjct:    2 VLMTMIGRAADGLPLAASMQADEQ-SGREFQEYQAQAKQIFRKLSDRSP-PKCNIESGSMMFHY--IIENGVCYLTLTEKMFPSRLAFGFLDDISKEFWKL--------YSSEISTVVRPYSFIEFDNYIQKSRKNFMDSRSRRNINRLNDELHDIQRIVVQNIDEVLQRGEAISELDDKAGKLKDQSVKYKSDAHYLNVRTAYAKYAAVAIVFIIVII 208          
BLAST of mRNA_M-pyrifera_M_contig86836.20195.1 vs. uniprot
Match: A0A813C1F1_9DINO (Vesicle-trafficking protein SEC22b n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A813C1F1_9DINO)

HSP 1 Score: 82.4 bits (202), Expect = 1.310e-14
Identity = 61/217 (28.11%), Postives = 115/217 (53.00%), Query Frame = 1
Query:   16 TLLARASDGLALVAEESVEGVGSGGASSELREEAGRVGASLADHGEGARLLVDSGDRRYFFSCLRLRGVAFVAVATRGYPKEAAGAFLEDVAQDFWAYAQTQL---PVEWSRMLESVSAPHKWVRFDRMIERRRKALVDPTSASGAARVKAHVDEIRGYMSENIEALIERGEAMGDLRARSERLAEDAKKLKLSAHQLNACTKLQPYAIPAGISLLV 657
            T +AR+ DGL LV  E+ +   S   S +++++A ++   L  H    R  V+ G   + F      GV ++A+  +GYPK  A  FLED+   F    Q +     V++   +E++  P+ +++FDR I ++     DP S+   +++ +++ E+   M +NI+ +++RGE +  +  ++  + E++KK +    QL+  T LQ Y I   + L+V
Sbjct:    5 TFIARSLDGLILV--ETWDD--SNKVSKQIKDQAKQLLRKL--HNMPPRCSVE-GAGEFVFHYTMENGVCYMALFDKGYPKNLAFCFLEDIHMLFQQELQREFGTGSVDYRSHIETIEKPYYFIKFDRQITKKNTEYRDPKSSKALSKLNSNLQEVSNIMRQNIDEILKRGENLESVGRKANSIKEESKKFRSMTQQLSFQTMLQKYGIFVVVGLMV 214          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86836.20195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1G8C7_9STRA1.040e-2032.41Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
D8LIZ8_ECTSI2.140e-1929.82Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A6G0WBK5_9STRA8.200e-1927.98Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KKL0_9STRA4.380e-1827.98Aste57867_8523 protein n=5 Tax=Aphanomyces TaxID=1... [more]
A0A835Z3W0_9STRA3.250e-1728.11Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A6V1P6Q6_HETAK1.360e-1627.31Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
S8F4J7_TOXGM3.480e-1632.06Synaptobrevin family protein n=19 Tax=Sarcocystida... [more]
A0A812LTR8_SYMMI4.610e-1528.11Vesicle-trafficking protein SEC22b n=1 Tax=Symbiod... [more]
UPI001F03354C5.730e-1526.03vesicle-trafficking protein SEC22b-like n=1 Tax=Xe... [more]
A0A813C1F1_9DINO1.310e-1428.11Vesicle-trafficking protein SEC22b n=2 Tax=unclass... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86836contigM-pyrifera_M_contig86836:65..829 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score100.1
Seed ortholog evalue1.3e-18
Seed eggNOG ortholog115417.EPrPW00000016723
Preferred nameSEC22B
KEGG koko:K08517
KEGG Pathwayko04130,ko04145,ko05134,map04130,map04145,map05134
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000149,GO:0002376,GO:0002474,GO:0002478,GO:0002479,GO:0002790,GO:0003674,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005793,GO:0005794,GO:0005798,GO:0005886,GO:0006810,GO:0006886,GO:0006887,GO:0006888,GO:0006890,GO:0006900,GO:0006901,GO:0006903,GO:0006906,GO:0006996,GO:0007154,GO:0007267,GO:0008104,GO:0008150,GO:0009306,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009987,GO:0010506,GO:0010507,GO:0010604,GO:0010639,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016241,GO:0016242,GO:0019222,GO:0019882,GO:0019884,GO:0019905,GO:0022607,GO:0023052,GO:0023061,GO:0030133,GO:0030134,GO:0030135,GO:0030139,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0030666,GO:0030670,GO:0031090,GO:0031201,GO:0031224,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031410,GO:0031982,GO:0031984,GO:0032940,GO:0032991,GO:0033036,GO:0033043,GO:0033116,GO:0034613,GO:0042175,GO:0042176,GO:0042590,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044087,GO:0044088,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045335,GO:0045732,GO:0046903,GO:0046907,GO:0048002,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048279,GO:0048280,GO:0048284,GO:0048518,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0060255,GO:0061024,GO:0061025,GO:0061355,GO:0065003,GO:0065007,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0080090,GO:0090114,GO:0090174,GO:0097708,GO:0098588,GO:0098791,GO:0098796,GO:0098805,GO:0098827,GO:0198738,GO:1902115,GO:1902116,GO:1902902,GO:1990668,GO:2000785
EggNOG free text desc.Vesicle-trafficking protein SEC22b. Source PGD
EggNOG OGs1MARJ@121069,COG5143@1,KOG0862@2759
COG Functional cat.U
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons2
Model size663
Cds size663
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816777.6734576-CDS-M-pyrifera_M_contig86836:64..3911622816777.6734576-CDS-M-pyrifera_M_contig86836:64..391Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86836 65..391 +
1692278172.618815-CDS-M-pyrifera_M_contig86836:64..3911692278172.618815-CDS-M-pyrifera_M_contig86836:64..391Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86836 65..391 +
1622816777.6865547-CDS-M-pyrifera_M_contig86836:493..8291622816777.6865547-CDS-M-pyrifera_M_contig86836:493..829Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86836 494..829 +
1692278172.634518-CDS-M-pyrifera_M_contig86836:493..8291692278172.634518-CDS-M-pyrifera_M_contig86836:493..829Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86836 494..829 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86836.20195.1prot_M-pyrifera_M_contig86836.20195.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86836 65..829 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86836.20195.1

>prot_M-pyrifera_M_contig86836.20195.1 ID=prot_M-pyrifera_M_contig86836.20195.1|Name=mRNA_M-pyrifera_M_contig86836.20195.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=221bp
MAIVYTLLARASDGLALVAEESVEGVGSGGASSELREEAGRVGASLADHG
EGARLLVDSGDRRYFFSCLRLRGVAFVAVATRGYPKEAAGAFLEDVAQDF
WAYAQTQLPVEWSRMLESVSAPHKWVRFDRMIERRRKALVDPTSASGAAR
VKAHVDEIRGYMSENIEALIERGEAMGDLRARSERLAEDAKKLKLSAHQL
NACTKLQPYAIPAGISLLVIL
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mRNA from alignment at M-pyrifera_M_contig86836:65..829+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86836.20195.1 ID=mRNA_M-pyrifera_M_contig86836.20195.1|Name=mRNA_M-pyrifera_M_contig86836.20195.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=765bp|location=Sequence derived from alignment at M-pyrifera_M_contig86836:65..829+ (Macrocystis pyrifera P11B4 male)
ATGGCGATCGTGTACACGTTGTTGGCACGTGCATCAGACGGGTTGGCGCT GGTGGCAGAGGAAAGTGTGGAGGGAGTTGGAAGTGGAGGTGCATCATCGG AGTTGCGTGAGGAAGCAGGCCGTGTGGGGGCTTCTTTGGCAGATCATGGA GAAGGGGCACGCTTATTGGTAGATTCAGGCGACAGACGGTACTTTTTCAG CTGCTTACGGCTGCGTGGGGTTGCATTTGTGGCGGTTGCTACTCGAGGAT ATCCAAAGGAAGCGGCAGGTGCATTTTTGGAAGACGTTGCACAGGATTTT TGGGCATATGCGCAAACGCAGCTGCCTGTAGCGGAGGGAGTTGGAAGTGG GGAGATGATGGAAGGTAGAGCAAGGCATAGGGGTGGTGGTGGAGGTGGTG GAGGGGGTGGGGATGTGGTATTTCCAGAGGTGGAATGGAGTAGGATGCTT GAAAGTGTATCTGCACCTCACAAGTGGGTTCGTTTTGACAGAATGATCGA GAGACGTCGAAAAGCACTGGTGGATCCCACCTCTGCGTCTGGAGCAGCGA GAGTAAAAGCACATGTGGACGAGATTCGAGGATACATGAGTGAAAATATT GAAGCACTCATTGAACGTGGTGAAGCTATGGGAGATCTGAGGGCAAGGTC AGAGCGCCTCGCAGAGGATGCGAAGAAGCTCAAACTCTCCGCACATCAGC TCAATGCTTGTACGAAACTTCAGCCATACGCCATCCCTGCAGGAATCTCT CTCCTCGTCATCCTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86836:65..829+

>mRNA_M-pyrifera_M_contig86836.20195.1 ID=mRNA_M-pyrifera_M_contig86836.20195.1|Name=mRNA_M-pyrifera_M_contig86836.20195.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1326bp|location=Sequence derived from alignment at M-pyrifera_M_contig86836:65..829+ (Macrocystis pyrifera P11B4 male)
ATGGCGATCGTGTACACGTTGTTGGCACGTGCATCAGACGGGTTGGCGCT
GGTGGCAGAGGAAAGTGTGGAGGGAGTTGGAAGTGGAGGTGCATCATCGG
AGTTGCGTGAGGAAGCAGGCCGTGTGGGGGCTTCTTTGGCAGATCATGGA
GAAGGGGCACGCTTATTGGTAGATTCAGGCGACAGACGGTACTTTTTCAG
CTGCTTACGGCTGCGTGGGGTTGCATTTGTGGCGGTTGCTACTCGAGGAT
ATCCAAAGGAAGCGGCAGGTGCATTTTTGGAAGACGTTGCACAGGATTTT
TGGGCATATGCGCAAACGCAGCTGCCTATGGCGATCGTGTACACGTTGTT
GGCACGTGCATCAGACGGGTTGGCGCTGGTGGCAGAGGAAAGTGTGGAGG
GAGTTGGAAGTGGAGGTGCATCATCGGAGTTGCGTGAGGAAGCAGGCCGT
GTGGGGGCTTCTTTGGCAGATCATGGAGAAGGGGCACGCTTATTGGTAGA
TTCAGGCGACAGACGGTACTTTTTCAGCTGCTTACGGCTGCGTGGGGTTG
CATTTGTGGCGGTTGCTACTCGAGGATATCCAAAGGAAGCGGCAGGTGCA
TTTTTGGAAGACGTTGCACAGGATTTTTGGGCATATGCGCAAACGCAGCT
GCCTGTGGAATGGAGTAGGATGCTTGAAAGTGTATCTGCACCTCACAAGT
GGGTTCGTTTTGACAGAATGATCGAGAGACGTCGAAAAGCACTGGTGGAT
CCCACCTCTGCGTCTGGAGCAGCGAGAGTAAAAGCACATGTGGACGAGAT
TCGAGGATACATGAGTGAAAATATTGAAGCACTCATTGAACGTGGTGAAG
CTATGGGAGATCTGAGGGCAAGGTCAGAGCGCCTCGCAGAGGATGCGAAG
AAGCTCAAACTCTCCGCACATCAGCTCAATGCTTGTACGAAACTTCAGCC
ATACGCCATCCCTGCAGGAATCTCTCTCCTCGTCATCCTTGTGGAATGGA
GTAGGATGCTTGAAAGTGTATCTGCACCTCACAAGTGGGTTCGTTTTGAC
AGAATGATCGAGAGACGTCGAAAAGCACTGGTGGATCCCACCTCTGCGTC
TGGAGCAGCGAGAGTAAAAGCACATGTGGACGAGATTCGAGGATACATGA
GTGAAAATATTGAAGCACTCATTGAACGTGGTGAAGCTATGGGAGATCTG
AGGGCAAGGTCAGAGCGCCTCGCAGAGGATGCGAAGAAGCTCAAACTCTC
CGCACATCAGCTCAATGCTTGTACGAAACTTCAGCCATACGCCATCCCTG
CAGGAATCTCTCTCCTCGTCATCCTT
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