prot_M-pyrifera_M_contig8680.20186.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig8680.20186.1
Unique Name	prot_M-pyrifera_M_contig8680.20186.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	530

Homology

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BLAST of mRNA_M-pyrifera_M_contig8680.20186.1 vs. uniprot
Match: D8LRF9_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF9_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 1.300e-39
Identity = 103/201 (51.24%), Postives = 125/201 (62.19%), Query Frame = 0

Query:    3 KAYRPSRYYFEVIECARRLLLTGCLVFILPNSAGQSGVACVLAVASVCLFVTLRPFADQNDERQYVLGSIIIFLSMFVSLIPSVKIAXXXXXXXXXXXXXXXXXXXXLAGMALFEVFCEVHSIT--STVRSDSTDTSSATNHAGSSGGMDRGRSXXXXXXXXXXXXXXXXXXXXXSGYKNSSPEEPNTDHNPSSSELFEFV 201
            +AYRPSRYY+EVIECARRLLLTGCLVFILPNSAGQ+GVACVL+VA+V LF+TLRPFAD ND+R Y+LG+I+IFLSMFVSL+P ++IA                    L  MA  + F EV SI   S  R DS DTSS  N  G+ GG  R RS                     SGYKN SPE+ +   +P+  + ++F 
Sbjct: 1475 QAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLYILGAILIFLSMFVSLVPKIEIADGDDQSETVVSWLLIVLSLTLWLMAFMQCFLEVRSINAASGSRWDSGDTSSIANLMGN-GGFSR-RSGGGAGEYKSDGTS--------SGYKNFSPEDHHNTGHPA--DFYDFT 1663

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BLAST of mRNA_M-pyrifera_M_contig8680.20186.1 vs. uniprot
Match: A0A6H5JU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU65_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 3.790e-37
Identity = 115/201 (57.21%), Postives = 139/201 (69.15%), Query Frame = 0

Query:    3 KAYRPSRYYFEVIECARRLLLTGCLVFILPNSAGQSGVACVLAVASVCLFVTLRPFADQNDERQYVLGSIIIFLSMFVSLIPSVKIAXXXXXXXXXXXXXXXXXXXXLAGMALFEVFCEVHSI--TSTVRSDSTDTSSATNHAGSSGGMDRGRSXXXXXXXXXXXXXXXXXXXXXSGYKNSSPEEPNTDHNPSSSELFEFV 201
            +AYRPSRYY+EVIECARRLLLTGCLVFILPNSAGQ+GVACVL+VA+V LF+TLRPFAD ND+  Y+LG+I+IFLSMFVSL+P ++IA  XXXXXXXXXXXXXXXXXX     + + F +V SI   S  R DS DTSS  N  G+ GG  R  S                     SGYKN SPE+ +   +P+  + ++F 
Sbjct: 1770 QAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDHLYILGAILIFLSMFVSLVPKLEIADGXXXXXXXXXXXXXXXXXXXXXXXVMQCFWKVRSIDAASGRRWDSGDTSSIANLMGN-GGFSRRSSGGAGEDKSDDTS---------SGYKNFSPEDDHNTGHPA--DFYDFT 1958

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BLAST of mRNA_M-pyrifera_M_contig8680.20186.1 vs. uniprot
Match: D8LRF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF6_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 2.690e-24
Identity = 53/87 (60.92%), Postives = 70/87 (80.46%), Query Frame = 0

Query:    3 KAYRPSRYYFEVIECARRLLLTGCLVFILPNSAGQSGVACVLAVASVCLFVTLRPFADQNDERQYVLGSIIIFLSMFVSLIPSVKIA 89
            +AYRP+ YY+EV+EC RRLLLTGCLVFILPNSAGQ+ VACVLAV +V +F  + P++D +D R Y LG++ IFL+MF+ L+  V +A
Sbjct:  162 RAYRPAAYYYEVLECFRRLLLTGCLVFILPNSAGQAAVACVLAVLTVAVFAFVSPYSDPDDHRAYTLGALAIFLTMFMGLVVRVDLA 248

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BLAST of mRNA_M-pyrifera_M_contig8680.20186.1 vs. uniprot
Match: A0A6H5JU27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU27_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.850e-23
Identity = 51/81 (62.96%), Postives = 67/81 (82.72%), Query Frame = 0

Query:    3 KAYRPSRYYFEVIECARRLLLTGCLVFILPNSAGQSGVACVLAVASVCLFVTLRPFADQNDERQYVLGSIIIFLSMFVSLI 83
            +AYRP+ YY+EV+EC RRLLLTGCLVFILPNSAGQ+ VACVLAV +V +F  + P++D +D R Y LG++ IFL+MF+ L+
Sbjct:  312 RAYRPAAYYYEVLECFRRLLLTGCLVFILPNSAGQAAVACVLAVLTVAVFAFVSPYSDPDDHRAYTLGALAIFLTMFMGLV 392

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BLAST of mRNA_M-pyrifera_M_contig8680.20186.1 vs. uniprot
Match: A0A835YUM0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUM0_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.230e-15
Identity = 43/79 (54.43%), Postives = 57/79 (72.15%), Query Frame = 0

Query:    5 YRPSRYYFEVIECARRLLLTGCLVFILPNSAGQSGVACVLAVASVCLFVTLRPFADQNDERQYVLGSIIIFLSMFVSLI 83
            Y+ + Y++E+IECARRLLL+G LVFI P +  QS VAC LA+ ++ ++  L P  D  D R YVLGSIIIF SMF +L+
Sbjct: 1131 YKKTVYFWELIECARRLLLSGFLVFIFPGTPAQSAVACTLALITIVVYGELAPHKDSTDHRVYVLGSIIIFFSMFSALL 1209

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BLAST of mRNA_M-pyrifera_M_contig8680.20186.1 vs. uniprot
Match: A0A835YXM1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXM1_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.430e-15
Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 0

Query:    5 YRPSRYYFEVIECARRLLLTGCLVFILPNSAGQSGVACVLAVASVCLFVTLRPFADQNDERQYVLGSIIIFLSMFVSLI 83
            Y+   YY+EV+EC RRLLLTG L FILP   GQS  ACV A   + ++++ +P  ++ D   Y LG  IIFL+MF++L+
Sbjct:   89 YKGKTYYWEVVECGRRLLLTGILTFILPGEIGQSAYACVFAYFMLLVYLSSQPHMERTDRYLYTLGQTIIFLTMFIALL 167

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BLAST of mRNA_M-pyrifera_M_contig8680.20186.1 vs. uniprot
Match: A0A835ZGU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGU5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 7.700e-15
Identity = 41/81 (50.62%), Postives = 55/81 (67.90%), Query Frame = 0

Query:    3 KAYRPSRYYFEVIECARRLLLTGCLVFILPNSAGQSGVACVLAVASVCLFVTLRPFADQNDERQYVLGSIIIFLSMFVSLI 83
            K YR    Y+EV+EC RRL+LTG LVFILP   GQS  ACV A AS+ +++  +P   + D   Y LG+ ++FLSMFV+L+
Sbjct:   16 KPYRREYAYWEVVECLRRLMLTGVLVFILPGDPGQSVYACVFAYASIMVYMRCQPHHRRLDGWLYALGATVLFLSMFVALV 96

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BLAST of mRNA_M-pyrifera_M_contig8680.20186.1 vs. uniprot
Match: A0A6H5JCK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK8_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 2.000e-14
Identity = 43/87 (49.43%), Postives = 57/87 (65.52%), Query Frame = 0

Query:    3 KAYRPSRYYFEVIECARRLLLTGCLVFILPNSAGQSGVACVLAVASVCLFVTLRPFADQNDERQYVLGSIIIFLSMFVSLIPSVKIA 89
            K + P  YY+EVIEC RR+LLTG L+FI P++A Q+ +AC+ A AS+  F  LRP  D  D   Y LG + IFLS F++L+  V  A
Sbjct:  878 KDFDPDMYYYEVIECGRRILLTGALIFIAPHTAAQAAMACMFAFASLLGFELLRPHLDPADSWLYRLGCVTIFLSNFLALLTKVDAA 964

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BLAST of mRNA_M-pyrifera_M_contig8680.20186.1 vs. uniprot
Match: A0A836CFN7_9STRA (Beta_helix domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFN7_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.580e-14
Identity = 42/79 (53.16%), Postives = 52/79 (65.82%), Query Frame = 0

Query:    5 YRPSRYYFEVIECARRLLLTGCLVFILPNSAGQSGVACVLAVASVCLFVTLRPFADQNDERQYVLGSIIIFLSMFVSLI 83
            Y    YY+EV+EC RRLLL  C+VFILP S GQS  ACV A  S+ +++   P   + D R YVLG+ I+FLS FV LI
Sbjct:  844 YTRGMYYWEVVECGRRLLLASCVVFILPGSLGQSSYACVFAYFSIVVYLRCSPHVARIDGRLYVLGATILFLSYFVGLI 922

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BLAST of mRNA_M-pyrifera_M_contig8680.20186.1 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 3.890e-14
Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 0

Query:    3 KAYRPSRYYFEVIECARRLLLTGCLVFILPNSAGQSGVACVLAVASVCLFVTLRPFADQNDERQYVLGSIIIFLSMFVSLI 83
            K + P  YY+EVIEC RR+LLTG L+FI P++  Q+ +AC+ A AS+  F  LRP  D  D   Y LG ++IFLS F++L+
Sbjct: 1424 KDFGPDMYYYEVIECGRRILLTGALIFIAPHTVAQAAIACMFAFASLLGFELLRPHLDPADSWLYRLGCVVIFLSNFLALL 1504

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig8680.20186.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig8680.20186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LRF9_ECTSI	1.300e-39	51.24	Polymorphic outer membrane protein n=1 Tax=Ectocar...	[more]
A0A6H5JU65_9PHAE	3.790e-37	57.21	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LRF6_ECTSI	2.690e-24	60.92	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JU27_9PHAE	1.850e-23	62.96	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YUM0_9STRA	2.230e-15	54.43	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YXM1_9STRA	2.430e-15	48.10	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835ZGU5_9STRA	7.700e-15	50.62	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5JCK8_9PHAE	2.000e-14	49.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CFN7_9STRA	2.580e-14	53.16	Beta_helix domain-containing protein n=1 Tax=Tribo...	[more]
D7FRH0_ECTSI	3.890e-14	49.38	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 87..97
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 67..86
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..31
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 98..120
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 56..66
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..36
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 37..55
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 121..530
None	No IPR available	TMHMM	TMhelix		coord: 65..84
None	No IPR available	TMHMM	TMhelix		coord: 21..55
None	No IPR available	TMHMM	TMhelix		coord: 97..119

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig8680	contig	M-pyrifera_M_contig8680:7539..10731 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig8680.20186.1	mRNA_M-pyrifera_M_contig8680.20186.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig8680 7539..10731 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig8680.20186.1 ID=prot_M-pyrifera_M_contig8680.20186.1|Name=mRNA_M-pyrifera_M_contig8680.20186.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=530bp
LRKAYRPSRYYFEVIECARRLLLTGCLVFILPNSAGQSGVACVLAVASVC
LFVTLRPFADQNDERQYVLGSIIIFLSMFVSLIPSVKIADGDDESQIVLS
WLLILLSVFLAGMALFEVFCEVHSITSTVRSDSTDTSSATNHAGSSGGMD
RGRSGEEKSDNSGGSGGNGGGEGSGSGYKNSSPEEPNTDHNPSSSELFEF
VLDLHGSGGSGAKMGALGSGARDHPRAYCGGGSGAGGVGGSGVLHPSGSS
AGGGARVSGYADPVPNRFDVEDSEAGGGGAGSGGGIVTVHSSAASSHSQS
SGNTYGPLVLNNTRGGGAGGGGAGGGNGKFPPIHPYDDMPDSPAIAEAEE
MFARRVAHGGGGGRGGGGGRGGRGVRRGGGHDDRNRSPLRHVAKPAGNGA
FAVGVYGGGNVYSGGFDVHREGEGPGDLRLSPAEPTANAFPAPMTNAFPS
STDTPESQQPGVSRGRRRGGGGSALSPSPASSGISMISTDSRRQLLAPSP
ATSEATIPGSVEEYSMSTANGGARGGGGSG