mRNA_M-pyrifera_M_contig86780.20184.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86780.20184.1
Unique NamemRNA_M-pyrifera_M_contig86780.20184.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig86780.20184.1 vs. uniprot
Match: A0A8H7NVR0_9APHY (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NVR0_9APHY)

HSP 1 Score: 103 bits (258), Expect = 2.630e-24
Identity = 55/123 (44.72%), Postives = 78/123 (63.41%), Query Frame = 1 
Query:    1 GLASRLGTRSYARVKQARVAEVFGIVVGTLGVEGFGSVVATLRLALRERGLGCYTLLVGKVNPEKLGNFPEIDCFVVVGAGDYAAPPLLDFPKPVLSPHECLLALLPRSKWTGQAILDFPQFL 369
            G  ++L  R YA V++AR A+VFGI+VGTLGV  +  +++ LR  L       YT+ VGK+NP KL NF EIDCFV+V   + +     DF +P+++P+E  +AL     WTGQ +LDF + L
Sbjct:   97 GRTNKLLMRRYAVVQKARDADVFGILVGTLGVASYLPLISHLRTILSRAHKKSYTISVGKLNPAKLANFLEIDCFVLVACPENSLIDAKDFLRPIITPYELEIALRTEQSWTGQYVLDFDKLL 219
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BLAST of mRNA_M-pyrifera_M_contig86780.20184.1 vs. uniprot
Match: A0A0C9XXJ7_9AGAM (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Pisolithus microcarpus 441 TaxID=765257 RepID=A0A0C9XXJ7_9AGAM)

HSP 1 Score: 105 bits (262), Expect = 4.190e-24
Identity = 55/123 (44.72%), Postives = 77/123 (62.60%), Query Frame = 1 
Query:    1 GLASRLGTRSYARVKQARVAEVFGIVVGTLGVEGFGSVVATLRLALRERGLGCYTLLVGKVNPEKLGNFPEIDCFVVVGAGDYAAPPLLDFPKPVLSPHECLLALLPRSKWTGQAILDFPQFL 369
            G  ++L  R +A V++AR A+VFGI+VGTLGV  + SV+  LR  L       YT+ VGK+NP KL NF EI+CFV+    + +     DF KP+++PHE  +ALLP   W G+ +LDF   +
Sbjct:  272 GRTNKLLMRRFAAVQKARDADVFGILVGTLGVASYLSVITYLRKLLSRAKKKSYTISVGKLNPAKLANFMEIECFVLAACPENSLIESKDFFKPIITPHELKVALLPEGTWLGRYVLDFSHLI 394
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BLAST of mRNA_M-pyrifera_M_contig86780.20184.1 vs. uniprot
Match: K5UN23_PHACS (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) TaxID=650164 RepID=K5UN23_PHACS)

HSP 1 Score: 104 bits (260), Expect = 7.570e-24
Identity = 54/119 (45.38%), Postives = 78/119 (65.55%), Query Frame = 1 
Query:    1 GLASRLGTRSYARVKQARVAEVFGIVVGTLGVEGFGSVVATLRLALRERGLGCYTLLVGKVNPEKLGNFPEIDCFVVVGAGDYAAPPLLDFPKPVLSPHECLLALLPRSKWTGQAILDF 357
            G  ++L  R YA V++AR A+VFGI+VGTLGV  +  +++ LR  L       YT+ VGK+NP KLGNF EI+CFV+V   + +     +F +P+++P+E  +AL P   WTGQ +LDF
Sbjct:  261 GRTNKLLMRRYAAVQKARDADVFGILVGTLGVASYLPLISRLRRLLARAQKKSYTITVGKLNPAKLGNFLEIECFVLVACPENSLVEAKEFLRPIITPYELEVALQPEPLWTGQYVLDF 379
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BLAST of mRNA_M-pyrifera_M_contig86780.20184.1 vs. uniprot
Match: A0A0C3G7V1_PILCF (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Piloderma croceum (strain F 1598) TaxID=765440 RepID=A0A0C3G7V1_PILCF)

HSP 1 Score: 104 bits (260), Expect = 7.790e-24
Identity = 52/120 (43.33%), Postives = 80/120 (66.67%), Query Frame = 1 
Query:   10 SRLGTRSYARVKQARVAEVFGIVVGTLGVEGFGSVVATLRLALRERGLGCYTLLVGKVNPEKLGNFPEIDCFVVVGAGDYAAPPLLDFPKPVLSPHECLLALLPRSKWTGQAILDFPQFL 369
            ++L  R YA V++AR A++FGI+VGTLGV  +  +++ +R  LR+     YT+ VGK+NP KL NFPEI+CFV+V   + +     DF KP+++P+E  +AL     WTG+ +LDF + +
Sbjct:  270 NKLLMRRYAVVQKARDADIFGILVGTLGVASYLPLISHIRQLLRQAHKKSYTISVGKLNPAKLANFPEIECFVLVACPENSLIDAKDFFKPIITPYELNVALKTEQSWTGRYVLDFDKLI 389
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BLAST of mRNA_M-pyrifera_M_contig86780.20184.1 vs. uniprot
Match: A0A5M3MFG1_CONPW (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Coniophora puteana (strain RWD-64-598) TaxID=741705 RepID=A0A5M3MFG1_CONPW)

HSP 1 Score: 104 bits (260), Expect = 8.290e-24
Identity = 54/120 (45.00%), Postives = 78/120 (65.00%), Query Frame = 1 
Query:   10 SRLGTRSYARVKQARVAEVFGIVVGTLGVEGFGSVVATLRLALRERGLGCYTLLVGKVNPEKLGNFPEIDCFVVVGAGDYAAPPLLDFPKPVLSPHECLLALLPRSKWTGQAILDFPQFL 369
            +RL  R +A V++AR A+VFGI+VGTLGV  +  ++A LR  L       YT+ VGK+NP KL NF E++CFV+V   + +     +F KP+++P E  +AL+P   WTG+ +LDF Q L
Sbjct:  277 NRLLMRRFAAVQKARDADVFGILVGTLGVASYLPLIAHLRAQLARARKKSYTISVGKLNPAKLANFMEVECFVLVACPENSVVESKEFFKPIVTPFELEVALMPEGTWTGRYVLDFEQLL 396
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BLAST of mRNA_M-pyrifera_M_contig86780.20184.1 vs. uniprot
Match: A0A1X6N2T5_9APHY (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=2 Tax=Postia placenta TaxID=104341 RepID=A0A1X6N2T5_9APHY)

HSP 1 Score: 103 bits (258), Expect = 1.040e-23
Identity = 55/123 (44.72%), Postives = 78/123 (63.41%), Query Frame = 1 
Query:    1 GLASRLGTRSYARVKQARVAEVFGIVVGTLGVEGFGSVVATLRLALRERGLGCYTLLVGKVNPEKLGNFPEIDCFVVVGAGDYAAPPLLDFPKPVLSPHECLLALLPRSKWTGQAILDFPQFL 369
            G  ++L  R YA V++AR A+VFGI+VGTLGV  +  +++ LR  L       YT+ VGK+NP KL NF EIDCFV+V   + +     DF +P+++P+E  +AL     WTGQ +LDF + L
Sbjct:  217 GRTNKLLMRRYAVVQKARDADVFGILVGTLGVASYLPLISHLRTILSRAHKKSYTISVGKLNPAKLANFLEIDCFVLVACPENSLIDAKDFLRPIITPYELEIALRTEQSWTGQYVLDFDKLL 339
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BLAST of mRNA_M-pyrifera_M_contig86780.20184.1 vs. uniprot
Match: A0A5C2SA31_9APHY (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=2 Tax=Lentinus tigrinus TaxID=5365 RepID=A0A5C2SA31_9APHY)

HSP 1 Score: 104 bits (259), Expect = 1.110e-23
Identity = 55/123 (44.72%), Postives = 80/123 (65.04%), Query Frame = 1 
Query:    1 GLASRLGTRSYARVKQARVAEVFGIVVGTLGVEGFGSVVATLRLALRERGLGCYTLLVGKVNPEKLGNFPEIDCFVVVGAGDYAAPPLLDFPKPVLSPHECLLALLPRSKWTGQAILDFPQFL 369
            G  ++L  R YA V++AR A+V GI+VGTLGV  +  +++ LR  ++      YTL VGK+NP KLGNF EI+CFV+V   + +     +F +P+++P+E  LAL P   WTG+ +LDF Q L
Sbjct:  273 GRTNKLLMRRYAVVQRARDADVIGILVGTLGVANYLPLISHLRDIIKRAHKKSYTLSVGKINPAKLGNFLEIECFVLVACPENSLLDAKEFLRPIVTPYELELALQPTQTWTGRYVLDFEQLL 395
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BLAST of mRNA_M-pyrifera_M_contig86780.20184.1 vs. uniprot
Match: A0A5C3Q0A5_9APHY (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=2 Tax=Polyporus TaxID=5637 RepID=A0A5C3Q0A5_9APHY)

HSP 1 Score: 103 bits (258), Expect = 1.580e-23
Identity = 54/123 (43.90%), Postives = 80/123 (65.04%), Query Frame = 1 
Query:    1 GLASRLGTRSYARVKQARVAEVFGIVVGTLGVEGFGSVVATLRLALRERGLGCYTLLVGKVNPEKLGNFPEIDCFVVVGAGDYAAPPLLDFPKPVLSPHECLLALLPRSKWTGQAILDFPQFL 369
            G  ++L  R YA V++AR A+V GI+VGTLGV  +  +++ LR  ++      YTL VGK+NP KLGNF EI+CFV+V   + +     +F +P+++P+E  +AL P   WTG+ +LDF Q L
Sbjct:  278 GRTNKLLMRRYAAVQRARDADVIGILVGTLGVANYLPLISHLRDIIKRAHKKSYTLSVGKINPAKLGNFLEIECFVLVACPENSLLDAKEFLRPIVTPYELEVALQPTQTWTGRYVLDFEQLL 400
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BLAST of mRNA_M-pyrifera_M_contig86780.20184.1 vs. uniprot
Match: B8PBC4_POSPM (Predicted protein (Fragment) n=1 Tax=Postia placenta (strain ATCC 44394 / Madison 698-R) TaxID=561896 RepID=B8PBC4_POSPM)

HSP 1 Score: 103 bits (258), Expect = 2.100e-23
Identity = 55/123 (44.72%), Postives = 78/123 (63.41%), Query Frame = 1 
Query:    1 GLASRLGTRSYARVKQARVAEVFGIVVGTLGVEGFGSVVATLRLALRERGLGCYTLLVGKVNPEKLGNFPEIDCFVVVGAGDYAAPPLLDFPKPVLSPHECLLALLPRSKWTGQAILDFPQFL 369
            G  ++L  R YA V++AR A+VFGI+VGTLGV  +  +++ LR  L       YT+ VGK+NP KL NF EIDCFV+V   + +     DF +P+++P+E  +AL     WTGQ +LDF + L
Sbjct:  144 GRTNKLLMRRYAVVQKARDADVFGILVGTLGVASYLPLISHLRTILSRAHKKSYTISVGKLNPAKLANFLEIDCFVLVACPENSLIDAKDFLRPIITPYELEIALRTEQSWTGQYVLDFDKLL 266
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BLAST of mRNA_M-pyrifera_M_contig86780.20184.1 vs. uniprot
Match: A0A4S4N494_9APHY (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4N494_9APHY)

HSP 1 Score: 103 bits (256), Expect = 2.180e-23
Identity = 53/123 (43.09%), Postives = 80/123 (65.04%), Query Frame = 1 
Query:    1 GLASRLGTRSYARVKQARVAEVFGIVVGTLGVEGFGSVVATLRLALRERGLGCYTLLVGKVNPEKLGNFPEIDCFVVVGAGDYAAPPLLDFPKPVLSPHECLLALLPRSKWTGQAILDFPQFL 369
            G  +RL  R YA V++AR A+VFGI+VGTLGV  +  +++ LR  L++     YT+ VGK+NP KL NF EI+CFV+V   + +     +F +P+++P+E  +AL     WTG+ +LDF + L
Sbjct:  261 GKTNRLLMRRYAMVQRARDADVFGILVGTLGVASYLPLISHLRTILKQAQKKSYTISVGKLNPAKLANFMEIECFVMVACPENSVVEAKEFLRPIVTPYELEIALQSEPNWTGKYVLDFNEVL 383
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86780.20184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8H7NVR0_9APHY2.630e-2444.722-(3-amino-3-carboxypropyl)histidine synthase subu... [more]
A0A0C9XXJ7_9AGAM4.190e-2444.722-(3-amino-3-carboxypropyl)histidine synthase subu... [more]
K5UN23_PHACS7.570e-2445.382-(3-amino-3-carboxypropyl)histidine synthase subu... [more]
A0A0C3G7V1_PILCF7.790e-2443.332-(3-amino-3-carboxypropyl)histidine synthase subu... [more]
A0A5M3MFG1_CONPW8.290e-2445.002-(3-amino-3-carboxypropyl)histidine synthase subu... [more]
A0A1X6N2T5_9APHY1.040e-2344.722-(3-amino-3-carboxypropyl)histidine synthase subu... [more]
A0A5C2SA31_9APHY1.110e-2344.722-(3-amino-3-carboxypropyl)histidine synthase subu... [more]
A0A5C3Q0A5_9APHY1.580e-2343.902-(3-amino-3-carboxypropyl)histidine synthase subu... [more]
B8PBC4_POSPM2.100e-2344.72Predicted protein (Fragment) n=1 Tax=Postia placen... [more]
A0A4S4N494_9APHY2.180e-2343.092-(3-amino-3-carboxypropyl)histidine synthase subu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86780contigM-pyrifera_M_contig86780:73..441 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score110.9
Seed ortholog evalue4.2e-22
Seed eggNOG ortholog80637.XP_007772270.1
Preferred nameDPH2
KEGG koko:K17866
Hectar predicted targeting categorymitochondrion
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006417,GO:0006448,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010608,GO:0017182,GO:0017183,GO:0018193,GO:0018202,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0032268,GO:0034248,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1900247,GO:1901564,GO:2000112,GO:2000765
EggNOG free text desc.Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2
EggNOG OGs224BM@155619,38FXZ@33154,3NUDH@4751,3UY4R@5204,COG1736@1,KOG2648@2759
COG Functional cat.J
Best tax levelAgaricomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012
Exons1
Model size369
Cds size369
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816777.1894479-CDS-M-pyrifera_M_contig86780:72..4411622816777.1894479-CDS-M-pyrifera_M_contig86780:72..441Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86780 73..441 +
1692278172.29215-CDS-M-pyrifera_M_contig86780:72..4411692278172.29215-CDS-M-pyrifera_M_contig86780:72..441Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86780 73..441 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86780.20184.1prot_M-pyrifera_M_contig86780.20184.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86780 73..441 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86780.20184.1

>prot_M-pyrifera_M_contig86780.20184.1 ID=prot_M-pyrifera_M_contig86780.20184.1|Name=mRNA_M-pyrifera_M_contig86780.20184.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp
GLASRLGTRSYARVKQARVAEVFGIVVGTLGVEGFGSVVATLRLALRERG
LGCYTLLVGKVNPEKLGNFPEIDCFVVVGAGDYAAPPLLDFPKPVLSPHE
CLLALLPRSKWTGQAILDFPQFL
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mRNA from alignment at M-pyrifera_M_contig86780:73..441+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86780.20184.1 ID=mRNA_M-pyrifera_M_contig86780.20184.1|Name=mRNA_M-pyrifera_M_contig86780.20184.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=369bp|location=Sequence derived from alignment at M-pyrifera_M_contig86780:73..441+ (Macrocystis pyrifera P11B4 male)
GGGTTGGCATCACGGTTGGGAACGAGGAGTTATGCTAGAGTGAAGCAAGC
AAGGGTGGCAGAGGTGTTTGGGATTGTGGTGGGAACATTGGGGGTGGAAG
GGTTTGGAAGTGTAGTTGCTACATTGCGGCTTGCCTTGCGAGAACGAGGG
TTGGGGTGTTATACCTTGTTGGTGGGCAAAGTCAACCCTGAGAAACTTGG
AAATTTCCCGGAAATTGATTGCTTTGTGGTCGTGGGAGCAGGAGATTACG
CCGCCCCACCTCTCCTCGATTTCCCAAAACCAGTTCTCTCCCCCCACGAA
TGCCTCCTCGCCCTCCTCCCAAGATCCAAGTGGACCGGGCAAGCTATCCT
CGACTTCCCACAGTTCCTA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86780:73..441+

>mRNA_M-pyrifera_M_contig86780.20184.1 ID=mRNA_M-pyrifera_M_contig86780.20184.1|Name=mRNA_M-pyrifera_M_contig86780.20184.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig86780:73..441+ (Macrocystis pyrifera P11B4 male)
GGGTTGGCATCACGGTTGGGAACGAGGAGTTATGCTAGAGTGAAGCAAGC
AAGGGTGGCAGAGGTGTTTGGGATTGTGGTGGGAACATTGGGGGTGGAAG
GGTTTGGAAGTGTAGTTGCTACATTGCGGCTTGCCTTGCGAGAACGAGGG
TTGGGGTGTTATACCTTGTTGGTGGGCAAAGTCAACCCTGAGAAACTTGG
AAATTTCCCGGAAATTGATTGCTTTGTGGTCGTGGGAGCAGGAGATTACG
CCGCCCCACCTCTCCTCGATTTCCCAAAACCAGTTCTCTCCCCCCACGAA
TGCCTCCTCGCCCTCCTCCCAAGATCCAAGTGGACCGGGCAAGCTATCCT
CGACTTCCCACAGTTCCTAGGGTTGGCATCACGGTTGGGAACGAGGAGTT
ATGCTAGAGTGAAGCAAGCAAGGGTGGCAGAGGTGTTTGGGATTGTGGTG
GGAACATTGGGGGTGGAAGGGTTTGGAAGTGTAGTTGCTACATTGCGGCT
TGCCTTGCGAGAACGAGGGTTGGGGTGTTATACCTTGTTGGTGGGCAAAG
TCAACCCTGAGAAACTTGGAAATTTCCCGGAAATTGATTGCTTTGTGGTC
GTGGGAGCAGGAGATTACGCCGCCCCACCTCTCCTCGATTTCCCAAAACC
AGTTCTCTCCCCCCACGAATGCCTCCTCGCCCTCCTCCCAAGATCCAAGT
GGACCGGGCAAGCTATCCTCGACTTCCCACAGTTCCTA
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