mRNA_M-pyrifera_M_contig86761.20182.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86761.20182.1
Unique NamemRNA_M-pyrifera_M_contig86761.20182.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig86761.20182.1 vs. uniprot
Match: A0A3B0ZI46_9ZZZZ (Single-stranded-DNA-specific exonuclease RecJ (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0ZI46_9ZZZZ)

HSP 1 Score: 354 bits (908), Expect = 3.300e-117
Identity = 176/279 (63.08%), Postives = 214/279 (76.70%), Query Frame = 1
Query:    1 ADAIVNPNQHGDEFPSKNLAGCGVIFYVLLALRAELRAQNYFTDNNIPDPKLAELLDLVALGTVADVVPLDHNNRILVHQGLSRMQAGHCRPGIRALLTVANRKINHLQSSDLGFAVAPRLNAAGRLDDMSVGIACLLAEDESTAMKLANQLDELNKERREIESDMQIQALEEVRKLQFDTDNTAMGLVIYEPNWHQGVIGLVAGRIKERMHRPVIAFAKASETEFKGSARSIPGLHIRDALDRVSKSHPDIIKKFGGHAMAAGLSIHASKFTEFKQAF 837
            ADAIVNPNQ GD FPSK LAG GV FY+++ALR+ LR   +FT  NIP+P LA  LDLVALGTVADVVPLD NNR+LV QGL R++AGHCRPGIRALL VA R    + +SD GFA  PRLNAAGRLDDMS+GI CLL++    A +LA QLD LN+ERREIE+ M+ +A++ +  +Q D DN   G  +Y+  WHQGVIG++A RIKE+ HRPVI FA A + E KGSARSIPGLHIRD LD V+  HP ++ KFGGHAMAAG+S+ A++  +F+QAF
Sbjct:  169 ADAIVNPNQPGDNFPSKALAGVGVAFYLMMALRSRLRDSGWFTQQNIPEPNLAAYLDLVALGTVADVVPLDRNNRLLVRQGLLRIRAGHCRPGIRALLEVAGRNAARVVASDFGFAAGPRLNAAGRLDDMSLGIECLLSDSGQQADELARQLDALNRERREIETTMKSEAMQHLDAMQLDHDNLPAGFCLYDSAWHQGVIGILASRIKEQFHRPVIIFANAGDGELKGSARSIPGLHIRDLLDAVAVGHPGLLNKFGGHAMAAGMSLEAARLDDFRQAF 447          
BLAST of mRNA_M-pyrifera_M_contig86761.20182.1 vs. uniprot
Match: A0A2A2FWB5_9PSED (Single-stranded-DNA-specific exonuclease RecJ n=3 Tax=Pseudomonas TaxID=286 RepID=A0A2A2FWB5_9PSED)

HSP 1 Score: 354 bits (909), Expect = 2.540e-116
Identity = 180/280 (64.29%), Postives = 215/280 (76.79%), Query Frame = 1
Query:    1 ADAIVNPNQHGDEFPSKNLAGCGVIFYVLLALRAELRAQNYFTDNNIPDPKLAELLDLVALGTVADVVPLDHNNRILVHQGLSRMQAGHCRPGIRALLTVANRKINHLQSSDLGFAVAPRLNAAGRLDDMSVGIACLLAEDESTAMKLANQLDELNKERREIESDMQIQALEEVRKLQFDTDNTAMGLVIYEPNWHQGVIGLVAGRIKERMHRPVIAFAKASETEFKGSARSIPGLHIRDALDRVSKSHPDIIKKFGGHAMAAGLSIHASKFTEFKQAFD 840
            ADAIVNPNQ G EFPSK +AG GVIFYV+LALRA LR   +FT+   P+P L ELLDLVALGTVADVVPLD NNRILVHQGL+R++AG CRPGIRALL VA R +  L SSDLGF + PRLNAAGRLDDMS+GI CLL E E  A ++A +LD LN+ER+ IE +MQ QAL  +  +  D +    GL +++P+WHQGVIG++A R+K+R HRPVIAFA A   E KGSARS+ GLHIRDALD V+  +P +I KFGGHAMAAGLS+  + F  F+ AFD
Sbjct:  167 ADAIVNPNQPGCEFPSKGIAGVGVIFYVMLALRAALRESGWFTER--PEPNLGELLDLVALGTVADVVPLDANNRILVHQGLARIRAGRCRPGIRALLEVAGRPMGRLSSSDLGFILGPRLNAAGRLDDMSLGIECLLTESEDQAREMARELDSLNRERKSIEREMQQQALATLEAMSLDAEQLPFGLCLFDPDWHQGVIGILASRLKDRYHRPVIAFADAGNDEIKGSARSVAGLHIRDALDAVAAHNPGLISKFGGHAMAAGLSLPRAHFETFRAAFD 444          
BLAST of mRNA_M-pyrifera_M_contig86761.20182.1 vs. uniprot
Match: UPI00166C4BD0 (single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Halopseudomonas pertucinogena TaxID=86175 RepID=UPI00166C4BD0)

HSP 1 Score: 354 bits (908), Expect = 3.690e-116
Identity = 179/280 (63.93%), Postives = 218/280 (77.86%), Query Frame = 1
Query:    1 ADAIVNPNQHGDEFPSKNLAGCGVIFYVLLALRAELRAQNYFTDNNIPDPKLAELLDLVALGTVADVVPLDHNNRILVHQGLSRMQAGHCRPGIRALLTVANRKINHLQSSDLGFAVAPRLNAAGRLDDMSVGIACLLAEDESTAMKLANQLDELNKERREIESDMQIQALEEVRKLQFDTDNTAMGLVIYEPNWHQGVIGLVAGRIKERMHRPVIAFAKASETEFKGSARSIPGLHIRDALDRVSKSHPDIIKKFGGHAMAAGLSIHASKFTEFKQAFD 840
            ADAIVNP+Q G +FPSK++AG GVIFYVL+ALRAELR   +FT    P+P L ELLDLVALGTVADVVPLD NNRILVHQGL+R++AG CRPGIRALL VA R    L S+DLGF + PRLNAAGRLDDMS+GI CLL +DE  A+ +A +LD LN++R+ IE DMQ QAL  + +  F   +   GL +++P WHQGVIG++A R+KER HRPVIAFA A + + KGSARS+ GLHIRDALD V+ ++P +I KFGGHAMAAGLS+ A  F  F++AFD
Sbjct:  167 ADAIVNPSQPGCDFPSKSIAGVGVIFYVLMALRAELRGMGWFTARR-PEPNLGELLDLVALGTVADVVPLDANNRILVHQGLARIRAGRCRPGIRALLEVARRPAERLASTDLGFIIGPRLNAAGRLDDMSLGIECLLTDDEQLALDMARELDSLNRDRKSIEQDMQQQALTMLDETGFQDSDLPFGLCLFDPQWHQGVIGILASRLKERYHRPVIAFADAGDGQIKGSARSVSGLHIRDALDSVAAANPGLISKFGGHAMAAGLSMPAEHFEAFREAFD 445          
BLAST of mRNA_M-pyrifera_M_contig86761.20182.1 vs. uniprot
Match: W7QL56_9ALTE (Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Catenovulum agarivorans DS-2 TaxID=1328313 RepID=W7QL56_9ALTE)

HSP 1 Score: 352 bits (903), Expect = 1.920e-115
Identity = 179/280 (63.93%), Postives = 220/280 (78.57%), Query Frame = 1
Query:    1 ADAIVNPNQHGDEFPSKNLAGCGVIFYVLLALRAELRAQNYFTDNNIPDPKLAELLDLVALGTVADVVPLDHNNRILVHQGLSRMQAGHCRPGIRALLTVANRKINHLQSSDLGFAVAPRLNAAGRLDDMSVGIACLLAEDESTAMKLANQLDELNKERREIESDMQIQALEEVRKLQFDTDNTAMGLVIYEPNWHQGVIGLVAGRIKERMHRPVIAFAKASETEFKGSARSIPGLHIRDALDRVSKSHPDIIKKFGGHAMAAGLSIHASKFTEFKQAFD 840
            ADAIVNPNQ    FPSKN+AG GV FY++LALRA LR QNYFT N + +P LA LLDLVALGTVADVVPLD  NRILV QG++R++ GH RPGI+ALL +A R    L SSD GFAV PRLNAAGRLDDM++GI+CLLA D + AM +A++LDELN+ERR IES MQI+A+  + K+Q D  +   G+ +Y+ +WHQGVIG++AGRIKER HRPVI FA+ ++   KGS RSIPGLHIRD L+R+   HP++I KFGGHAMAAGLSI+ + F +FKQ F+
Sbjct:  165 ADAIVNPNQPDCPFPSKNIAGVGVAFYLMLALRAHLRKQNYFTANQLKEPNLATLLDLVALGTVADVVPLDDVNRILVQQGINRIKKGHARPGIKALLDIAKRDYRQLVSSDFGFAVGPRLNAAGRLDDMTLGISCLLAPDYTQAMHIASRLDELNQERRAIESSMQIEAINTLSKIQLD--DLPYGICLYQNDWHQGVIGILAGRIKERYHRPVIIFAEDNDEVLKGSCRSIPGLHIRDVLERIHTLHPNLIIKFGGHAMAAGLSINKANFDQFKQVFN 442          
BLAST of mRNA_M-pyrifera_M_contig86761.20182.1 vs. uniprot
Match: A0A2E3MIE3_9GAMM (Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MIE3_9GAMM)

HSP 1 Score: 352 bits (903), Expect = 2.220e-115
Identity = 181/279 (64.87%), Postives = 215/279 (77.06%), Query Frame = 1
Query:    1 ADAIVNPNQHGDEFPSKNLAGCGVIFYVLLALRAELRAQNYFTDNNIPDPKLAELLDLVALGTVADVVPLDHNNRILVHQGLSRMQAGHCRPGIRALLTVANRKINHLQSSDLGFAVAPRLNAAGRLDDMSVGIACLLAEDESTAMKLANQLDELNKERREIESDMQIQALEEVRKLQFDTDNTAMGLVIYEPNWHQGVIGLVAGRIKERMHRPVIAFAKASETEFKGSARSIPGLHIRDALDRVSKSHPDIIKKFGGHAMAAGLSIHASKFTEFKQAF 837
            ADAIVNPN+HGD F SKNLAG GVIFYV+LALRA+LR  ++F    IP+P +AELLDLVALGTVADVVPLD NNRILV QGL R++AG CRPGI ALL +  RK++ + ++DL FAVAPRLNAAGRLDDMS GI CLL+ D+  A  LA++LD LN ER+ IE+DMQ QAL+ +  +  D     MGL ++E NWHQGVIG+VA RIKER+HRPVIAFA A +   KGSARSIPGLHIRD LD V+   P +I KFGGHAMAAGL++  +    FKQ F
Sbjct:  170 ADAIVNPNRHGDPFLSKNLAGVGVIFYVMLALRAKLRDVDWFVSQAIPEPNMAELLDLVALGTVADVVPLDSNNRILVQQGLRRIRAGKCRPGIVALLEIGKRKLSSVVAADLAFAVAPRLNAAGRLDDMSHGIECLLSTDDKQARMLASELDSLNTERKSIETDMQKQALKAIDAVHVDATTVPMGLCLFEENWHQGVIGIVAARIKERVHRPVIAFANADDGFIKGSARSIPGLHIRDVLDEVATREPGLIDKFGGHAMAAGLTLLKANLPTFKQRF 448          
BLAST of mRNA_M-pyrifera_M_contig86761.20182.1 vs. uniprot
Match: A0A0F4QZX7_9GAMM (Single-stranded-DNA-specific exonuclease RecJ n=4 Tax=Marinomonas TaxID=28253 RepID=A0A0F4QZX7_9GAMM)

HSP 1 Score: 352 bits (902), Expect = 3.220e-115
Identity = 177/280 (63.21%), Postives = 221/280 (78.93%), Query Frame = 1
Query:    1 ADAIVNPNQHGDEFPSKNLAGCGVIFYVLLALRAELRAQNYFTDNNIPDPKLAELLDLVALGTVADVVPLDHNNRILVHQGLSRMQAGHCRPGIRALLTVANRKINHLQSSDLGFAVAPRLNAAGRLDDMSVGIACLLAEDESTAMKLANQLDELNKERREIESDMQIQALEEVRKLQFDTDNTAMGLVIYEPNWHQGVIGLVAGRIKERMHRPVIAFAKASETEFKGSARSIPGLHIRDALDRVSKSHPDIIKKFGGHAMAAGLSIHASKFTEFKQAFD 840
            ADAIVNPNQHG  F SK +AG GVIFYV+  LRAEL+A+++F   +IP+P++A+ LDLVALGTVADVVPLD NNRILV QGL R+QAGH RPGI ALL VANR ++ +++SDLGFAV PRLNAAGRLDDMS+GIACLL  +   A +LA +LD+LN+ER++IES+M+ QA   + KL  D  +   G+  Y+  WHQGVIG++A R+K++ +RPVIAFAK  + E KGSARSIPGLHIRDALD ++K HP ++ KFGGHAMAAG+SI    + EF QAFD
Sbjct:  170 ADAIVNPNQHGCGFDSKAMAGVGVIFYVMSGLRAELKARHWFELQHIPEPRMADYLDLVALGTVADVVPLDANNRILVKQGLQRIQAGHARPGILALLEVANRDVSQIKASDLGFAVGPRLNAAGRLDDMSLGIACLLTSNTQQAKRLAQELDQLNRERKDIESEMKQQAEFVLEKLVADEQDLPNGMCFYDETWHQGVIGILASRMKDKCYRPVIAFAKVDDEEIKGSARSIPGLHIRDALDLLAKWHPHLLSKFGGHAMAAGMSIKEKHYAEFAQAFD 449          
BLAST of mRNA_M-pyrifera_M_contig86761.20182.1 vs. uniprot
Match: A0A1G0HZ13_9GAMM (Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_41_15 TaxID=1798282 RepID=A0A1G0HZ13_9GAMM)

HSP 1 Score: 350 bits (899), Expect = 7.900e-115
Identity = 178/279 (63.80%), Postives = 218/279 (78.14%), Query Frame = 1
Query:    1 ADAIVNPNQHGDEFPSKNLAGCGVIFYVLLALRAELRAQNYFTDNNIPDPKLAELLDLVALGTVADVVPLDHNNRILVHQGLSRMQAGHCRPGIRALLTVANRKINHLQSSDLGFAVAPRLNAAGRLDDMSVGIACLLAEDESTAMKLANQLDELNKERREIESDMQIQALEEVRKLQFDTDNTAMGLVIYEPNWHQGVIGLVAGRIKERMHRPVIAFAKASETEFKGSARSIPGLHIRDALDRVSKSHPDIIKKFGGHAMAAGLSIHASKFTEFKQAF 837
            A AIVNPNQ GDEFPSKNLAG GVIFYV+LALR+ L+ + +F + NIP PK+++ LDLVALG +ADVVPLD NNRILVHQGL R++AGH   GI ALL ++ RK  ++++ DLGFAV PRLNAAGRLDDMS+GIACLL+     A+ LA QLD+LNKERR IES M+ +A + + +L F  +   MGL +YE NWHQGV+GLVA R+KER+HRPVIAFAK      KGSARSI GLHIRD L+ ++  HPD+I KFGGHAMAAGLS+ + K+ EF +AF
Sbjct:  165 AFAIVNPNQPGDEFPSKNLAGVGVIFYVMLALRSYLKERGWFEEKNIPCPKMSDYLDLVALGIIADVVPLDKNNRILVHQGLRRIRAGHMCAGIAALLQISGRKHENIKAVDLGFAVGPRLNAAGRLDDMSLGIACLLSPSIPAALNLARQLDDLNKERRIIESQMKQEAFDAIEELHFSQE-LPMGLCVYEENWHQGVVGLVAARVKERVHRPVIAFAKVDNGTLKGSARSITGLHIRDTLEAIAVKHPDLISKFGGHAMAAGLSLPSEKYEEFVRAF 442          
BLAST of mRNA_M-pyrifera_M_contig86761.20182.1 vs. uniprot
Match: A0A2A5GHD3_9GAMM (Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A2A5GHD3_9GAMM)

HSP 1 Score: 351 bits (900), Expect = 8.350e-115
Identity = 178/288 (61.81%), Postives = 219/288 (76.04%), Query Frame = 1
Query:    1 ADAIVNPNQHGDEFPSKNLAGCGVIFYVLLALRAELRAQNYFTDNNIPDPKLAELLDLVALGTVADVVPLDHNNRILVHQGLSRMQAGHCRPGIRALLTVANRKINHLQSSDLGFAVAPRLNAAGRLDDMSVGIACLLAEDESTAMKLANQLDELNKERREIESDMQIQALEEVRKLQFDTDNTAMGLVIYEPNWHQGVIGLVAGRIKERMHRPVIAFAKAS--------ETEFKGSARSIPGLHIRDALDRVSKSHPDIIKKFGGHAMAAGLSIHASKFTEFKQAFD 840
            ADAI+NPNQHG +FPSKNLAG GV+FY+L ALR++LR   +F + NIP+P +AE LDLVALGTVADVVPLD  NR+LVHQGL R++AG  RPGI+ALL +A +    L ++DLGF V PRLNAAGRLDDMS+GI CLL  D   A + A QLDELN++RR IE+DMQ + L+ + KL  +      GL +++ NWHQGV+GL+A RIK+R+HRPVIAFA A         E E+KGSARSIPGLHIRDALD V+ +HP++I KFGGHAMAAGLS+ A  +  F QAFD
Sbjct:  170 ADAILNPNQHGCDFPSKNLAGVGVVFYLLSALRSQLRKTGWFAEKNIPEPNMAEWLDLVALGTVADVVPLDQTNRVLVHQGLQRIRAGKTRPGIQALLDLAGKDRQRLVAADLGFTVGPRLNAAGRLDDMSIGIECLLETDPYLAREYAVQLDELNRDRRVIEADMQREGLQMLDKLDLNEQELPWGLCLFDENWHQGVVGLLASRIKDRVHRPVIAFADAGGESEGNKGEKEYKGSARSIPGLHIRDALDTVATAHPELISKFGGHAMAAGLSLKAKNYPAFAQAFD 457          
BLAST of mRNA_M-pyrifera_M_contig86761.20182.1 vs. uniprot
Match: A0A522M207_9GAMM (Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A522M207_9GAMM)

HSP 1 Score: 350 bits (898), Expect = 1.020e-114
Identity = 181/280 (64.64%), Postives = 213/280 (76.07%), Query Frame = 1
Query:    1 ADAIVNPNQHGDEFPSKNLAGCGVIFYVLLALRAELRAQNYFTDNNIPDPKLAELLDLVALGTVADVVPLDHNNRILVHQGLSRMQAGHCRPGIRALLTVANRKINHLQSSDLGFAVAPRLNAAGRLDDMSVGIACLLAEDESTAMKLANQLDELNKERREIESDMQIQALEEVRKLQFDTDNTAMGLVIYEPNWHQGVIGLVAGRIKERMHRPVIAFAKASETEFKGSARSIPGLHIRDALDRVSKSHPDIIKKFGGHAMAAGLSIHASKFTEFKQAFD 840
            A+AIVNPNQ GD+FPSK LAG GV FYV+LALRA LR  + F    IP+P LA+ LDLVALGTVADVVPLDHNNRILV QGL+R+ A     GIRALL VA R    L +SDLGF VAPRLNAAGRL+DMS+GI CLL +D+  A+ +A +LD LN+ERR IESDMQ QAL  VR L  D      GL +Y+ +WHQGVIGLVA RIKER+HRPVIAFA A++ E KGSARS+PGLHIRDALD ++   P ++ KFGGHAMAAGL++   +F  F +AFD
Sbjct:  165 AEAIVNPNQPGDDFPSKALAGVGVAFYVMLALRAYLRENSGFAQQGIPEPNLAQFLDLVALGTVADVVPLDHNNRILVAQGLARLNADQGCAGIRALLAVAGRASRRLTASDLGFCVAPRLNAAGRLEDMSLGIECLLTDDDHAALAMAQRLDTLNRERRAIESDMQQQALTAVRSLHLDEAGLPRGLCLYDESWHQGVIGLVASRIKERVHRPVIAFAPANDRELKGSARSVPGLHIRDALDNIAARDPALLSKFGGHAMAAGLTLARDRFEAFARAFD 444          
BLAST of mRNA_M-pyrifera_M_contig86761.20182.1 vs. uniprot
Match: UPI0014219471 (single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Pseudomaricurvus alkylphenolicus TaxID=1306991 RepID=UPI0014219471)

HSP 1 Score: 350 bits (899), Expect = 1.080e-114
Identity = 179/281 (63.70%), Postives = 221/281 (78.65%), Query Frame = 1
Query:    1 ADAIVNPNQHGDEFPSKNLAGCGVIFYVLLALRAELRAQNYFTDNNIPDPKLAELLDLVALGTVADVVPLDHNNRILVHQGLSRMQAGHCRPGIRALLTVANRKINHLQSSDLGFAVAPRLNAAGRLDDMSVGIACLLAEDESTAMKLANQLDELNKERREIESDMQIQALEEVRKLQFDTDNTA-MGLVIYEPNWHQGVIGLVAGRIKERMHRPVIAFAKASETEFKGSARSIPGLHIRDALDRVSKSHPDIIKKFGGHAMAAGLSIHASKFTEFKQAFD 840
            ADA+VNPNQ G EFPSKNLAG GVIFY++ ALR  LR  N+F DN +P+PK+ + LDLV+LGTVADVVPLD+NNRILVHQGL R+++G  RPGI +LL VA RK + L +SDLGFAV PRLNAAGRLDDMS+GI CLL +    A ++A +LDELN++RR IE+ MQ +AL+ ++ L    D+    GL IY+  WHQGVIG++A RIKER HRPVIAFA A+E E KGSARSIPGLHIRDALD V+ ++P ++ KFGGHAMAAG+S+  S F  F++AFD
Sbjct:  170 ADAVVNPNQPGCEFPSKNLAGVGVIFYLMSALRGALRQINWFQDNLLPEPKMGDYLDLVSLGTVADVVPLDNNNRILVHQGLQRIRSGRARPGILSLLEVAGRKRDRLVASDLGFAVGPRLNAAGRLDDMSLGIECLLCQSPELAREMAVELDELNRDRRAIEAGMQQEALQSLQTLTLGEDSDLPWGLCIYDGQWHQGVIGILASRIKERFHRPVIAFADANEEEIKGSARSIPGLHIRDALDAVASANPGLLTKFGGHAMAAGMSLKKSDFERFQKAFD 450          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86761.20182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3B0ZI46_9ZZZZ3.300e-11763.08Single-stranded-DNA-specific exonuclease RecJ (Fra... [more]
A0A2A2FWB5_9PSED2.540e-11664.29Single-stranded-DNA-specific exonuclease RecJ n=3 ... [more]
UPI00166C4BD03.690e-11663.93single-stranded-DNA-specific exonuclease RecJ n=1 ... [more]
W7QL56_9ALTE1.920e-11563.93Single-stranded-DNA-specific exonuclease RecJ n=1 ... [more]
A0A2E3MIE3_9GAMM2.220e-11564.87Single-stranded-DNA-specific exonuclease RecJ n=1 ... [more]
A0A0F4QZX7_9GAMM3.220e-11563.21Single-stranded-DNA-specific exonuclease RecJ n=4 ... [more]
A0A1G0HZ13_9GAMM7.900e-11563.80Single-stranded-DNA-specific exonuclease RecJ n=1 ... [more]
A0A2A5GHD3_9GAMM8.350e-11561.81Single-stranded-DNA-specific exonuclease RecJ n=1 ... [more]
A0A522M207_9GAMM1.020e-11464.64Single-stranded-DNA-specific exonuclease RecJ n=1 ... [more]
UPI00142194711.080e-11463.70single-stranded-DNA-specific exonuclease RecJ n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86761contigM-pyrifera_M_contig86761:3..842 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score356.3
Seed ortholog evalue1.3e-95
Seed eggNOG ortholog1328313.DS2_15134
Preferred namerecJ
KEGG koko:K07462
KEGG Pathwayko03410,ko03430,ko03440,map03410,map03430,map03440
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360
EggNOG free text desc.COG0608 Single-stranded DNA-specific exonuclease
EggNOG OGs1MU1M@1224,1RMF4@1236,46499@72275,COG0608@1,COG0608@2
COG Functional cat.L
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Exons1
Model size840
Cds size840
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816777.1115372-CDS-M-pyrifera_M_contig86761:2..8421622816777.1115372-CDS-M-pyrifera_M_contig86761:2..842Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86761 3..842 +
1692278172.2455895-CDS-M-pyrifera_M_contig86761:2..8421692278172.2455895-CDS-M-pyrifera_M_contig86761:2..842Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86761 3..842 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86761.20182.1prot_M-pyrifera_M_contig86761.20182.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86761 3..842 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86761.20182.1

>prot_M-pyrifera_M_contig86761.20182.1 ID=prot_M-pyrifera_M_contig86761.20182.1|Name=mRNA_M-pyrifera_M_contig86761.20182.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=280bp
ADAIVNPNQHGDEFPSKNLAGCGVIFYVLLALRAELRAQNYFTDNNIPDP
KLAELLDLVALGTVADVVPLDHNNRILVHQGLSRMQAGHCRPGIRALLTV
ANRKINHLQSSDLGFAVAPRLNAAGRLDDMSVGIACLLAEDESTAMKLAN
QLDELNKERREIESDMQIQALEEVRKLQFDTDNTAMGLVIYEPNWHQGVI
GLVAGRIKERMHRPVIAFAKASETEFKGSARSIPGLHIRDALDRVSKSHP
DIIKKFGGHAMAAGLSIHASKFTEFKQAFD
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mRNA from alignment at M-pyrifera_M_contig86761:3..842+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86761.20182.1 ID=mRNA_M-pyrifera_M_contig86761.20182.1|Name=mRNA_M-pyrifera_M_contig86761.20182.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig86761:3..842+ (Macrocystis pyrifera P11B4 male)
GCCGATGCTATCGTTAATCCAAATCAGCATGGTGATGAATTTCCCAGTAA AAATCTTGCTGGCTGCGGCGTGATTTTTTATGTTTTACTCGCATTGAGAG CTGAGTTGCGTGCTCAGAATTATTTTACTGATAATAATATTCCCGATCCA AAACTCGCTGAACTTTTAGATTTAGTCGCGTTAGGTACCGTTGCTGATGT CGTTCCTTTGGATCACAATAATCGCATACTCGTGCACCAAGGCTTATCGC GCATGCAAGCCGGACATTGCCGGCCGGGTATTCGCGCGTTGTTAACGGTT GCCAATCGAAAAATCAATCACTTGCAATCATCTGATTTAGGATTTGCCGT CGCACCCAGGTTGAATGCAGCTGGGCGCTTAGATGATATGTCAGTGGGGA TCGCTTGTTTGTTGGCAGAAGATGAATCCACCGCAATGAAGCTTGCAAAT CAGCTTGATGAATTAAATAAAGAGCGGCGCGAAATTGAATCCGACATGCA AATTCAAGCACTAGAAGAAGTGCGCAAGTTACAGTTTGATACAGATAATA CTGCCATGGGACTAGTTATTTATGAACCCAACTGGCATCAAGGTGTAATC GGCCTTGTCGCAGGCCGAATAAAAGAGCGTATGCACAGACCGGTTATTGC GTTTGCTAAAGCGAGTGAAACTGAATTTAAAGGTTCGGCACGTTCAATCC CTGGATTACATATTCGAGATGCGCTGGACAGGGTTTCAAAATCACACCCT GATATCATCAAAAAATTTGGCGGGCATGCCATGGCTGCAGGCTTGAGTAT TCATGCAAGTAAATTCACAGAATTTAAACAAGCCTTTGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86761:3..842+

>mRNA_M-pyrifera_M_contig86761.20182.1 ID=mRNA_M-pyrifera_M_contig86761.20182.1|Name=mRNA_M-pyrifera_M_contig86761.20182.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1680bp|location=Sequence derived from alignment at M-pyrifera_M_contig86761:3..842+ (Macrocystis pyrifera P11B4 male)
GCCGATGCTATCGTTAATCCAAATCAGCATGGTGATGAATTTCCCAGTAA
AAATCTTGCTGGCTGCGGCGTGATTTTTTATGTTTTACTCGCATTGAGAG
CTGAGTTGCGTGCTCAGAATTATTTTACTGATAATAATATTCCCGATCCA
AAACTCGCTGAACTTTTAGATTTAGTCGCGTTAGGTACCGTTGCTGATGT
CGTTCCTTTGGATCACAATAATCGCATACTCGTGCACCAAGGCTTATCGC
GCATGCAAGCCGGACATTGCCGGCCGGGTATTCGCGCGTTGTTAACGGTT
GCCAATCGAAAAATCAATCACTTGCAATCATCTGATTTAGGATTTGCCGT
CGCACCCAGGTTGAATGCAGCTGGGCGCTTAGATGATATGTCAGTGGGGA
TCGCTTGTTTGTTGGCAGAAGATGAATCCACCGCAATGAAGCTTGCAAAT
CAGCTTGATGAATTAAATAAAGAGCGGCGCGAAATTGAATCCGACATGCA
AATTCAAGCACTAGAAGAAGTGCGCAAGTTACAGTTTGATACAGATAATA
CTGCCATGGGACTAGTTATTTATGAACCCAACTGGCATCAAGGTGTAATC
GGCCTTGTCGCAGGCCGAATAAAAGAGCGTATGCACAGACCGGTTATTGC
GTTTGCTAAAGCGAGTGAAACTGAATTTAAAGGTTCGGCACGTTCAATCC
CTGGATTACATATTCGAGATGCGCTGGACAGGGTTTCAAAATCACACCCT
GATATCATCAAAAAATTTGGCGGGCATGCCATGGCTGCAGGCTTGAGTAT
TCATGCAAGTAAATTCACAGAATTTAAACAAGCCTTTGATGCCGATGCTA
TCGTTAATCCAAATCAGCATGGTGATGAATTTCCCAGTAAAAATCTTGCT
GGCTGCGGCGTGATTTTTTATGTTTTACTCGCATTGAGAGCTGAGTTGCG
TGCTCAGAATTATTTTACTGATAATAATATTCCCGATCCAAAACTCGCTG
AACTTTTAGATTTAGTCGCGTTAGGTACCGTTGCTGATGTCGTTCCTTTG
GATCACAATAATCGCATACTCGTGCACCAAGGCTTATCGCGCATGCAAGC
CGGACATTGCCGGCCGGGTATTCGCGCGTTGTTAACGGTTGCCAATCGAA
AAATCAATCACTTGCAATCATCTGATTTAGGATTTGCCGTCGCACCCAGG
TTGAATGCAGCTGGGCGCTTAGATGATATGTCAGTGGGGATCGCTTGTTT
GTTGGCAGAAGATGAATCCACCGCAATGAAGCTTGCAAATCAGCTTGATG
AATTAAATAAAGAGCGGCGCGAAATTGAATCCGACATGCAAATTCAAGCA
CTAGAAGAAGTGCGCAAGTTACAGTTTGATACAGATAATACTGCCATGGG
ACTAGTTATTTATGAACCCAACTGGCATCAAGGTGTAATCGGCCTTGTCG
CAGGCCGAATAAAAGAGCGTATGCACAGACCGGTTATTGCGTTTGCTAAA
GCGAGTGAAACTGAATTTAAAGGTTCGGCACGTTCAATCCCTGGATTACA
TATTCGAGATGCGCTGGACAGGGTTTCAAAATCACACCCTGATATCATCA
AAAAATTTGGCGGGCATGCCATGGCTGCAGGCTTGAGTATTCATGCAAGT
AAATTCACAGAATTTAAACAAGCCTTTGAT
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