mRNA_M-pyrifera_M_contig86755.20179.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86755.20179.1 vs. uniprot
Match: A0A7X7D2G6_9ACTN (DUF4012 domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7D2G6_9ACTN) HSP 1 Score: 132 bits (332), Expect = 1.250e-31 Identity = 93/259 (35.91%), Postives = 133/259 (51.35%), Query Frame = 1 Query: 13 VDGAIMVDTHALSRLLGVVGTVEIDGTTYSEDTLLDYLLRGQYAAFGDSDREQEQRRIELASVTSAVFDTIIAGPHDPARLVEVVPSLLSGRHLLVYSEVPEQQAAWVEVGADGSSDGRQVGAYVLNLGASKLDPYLAVDVRVTEETLGDT-TVLDMRIDIRNEVENADRLPSYVVGPWEWIDLNEPGEYLGRLAVVLPGSTIEAAFVSDVPLEVFGPDGQGLVLGTRFRVRPGATTTIRVRAEIPSLLDSGSLVPSTR 786 V G I VD AL +L+GVVG VE+DG +Y+ +++ LLR QYA +GD D RR L V AVF AG + + + GRHL+++S E AW VGADG + ++N GA+KLD Y+ + V+ E G T L + D+ N + + P+YV+GP I+ GEY G + V LP + + P V G DG +V+G V+ G + TI V A +P +D+ +L S R Sbjct: 300 VAGVIAVDVEALRKLIGVVGPVEVDGVSYTVESVAGQLLRDQYALYGDRD----VRRDRLGEVARAVFTRFEAGEWSLEDMATALIDSVQGRHLMIWSVDEEASEAWAGVGADGHLTDTSLVVSLMNRGANKLDSYVETALDVSAERTGSGGTALTLSYDVTNA--SPETGPAYVLGPN--IEGMALGEYRGIVVVNLPAGSTDVDIEGATPTLV-GADGPTVVVGGSVEVQRGQSATIVVTAILPPGVDTVTLEASAR 549
BLAST of mRNA_M-pyrifera_M_contig86755.20179.1 vs. uniprot
Match: UPI001D12F2D9 (DUF4012 domain-containing protein n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D12F2D9) HSP 1 Score: 122 bits (306), Expect = 5.940e-28 Identity = 90/267 (33.71%), Postives = 132/267 (49.44%), Query Frame = 1 Query: 13 VDGAIMVDTHALSRLLGVVGTVEIDGTTYSEDTLLDY-----LLRGQYAAFGDSDREQEQRRIELASVTSAVFDTIIAGPHDPARLVEVVPSLLSGRHLLVYSEVPEQQAAWVEVGADGSSDGRQVGAYVLNLGASKLDPYLAVDVRVTEETLGDTTVLDMRIDIRNEVENADRLPSYVVGPWEWIDLNEPGEYLGRLAVVLPGSTIEAAFVSDVPLEVFGPDGQ-GLVLGTRFRVRPGATTTIRVRAEIPSLLDSGSLVPSTRPRP 795 VDG I +D L R+L +VG VEI LL QY G D +RR L++V AVF + ++P +L++ V S GRHLL++S P +QA W + A G+ G + +LN G +KLD +L V + T GD + + + N + LP YV GP+ +D+ EPG+Y+G LA+ +P S A L + G DG +L TR +R G +TTI + ++P D ++PS R P Sbjct: 354 VDGVIAMDVVGLQRMLELVGPVEITXXXXXXXXXXXXXXXXXLLLQQYLGSGSVD----ERRDRLSTVGQAVFAALNERGYEPGQLLQAVQSAGRGRHLLIWSSDPVEQAGWEALDASGALPGNGLLLSILNRGGNKLDQFLQVAADMRWTTEGDHRRVSVAVTATNAA--PENLPRYVGGPYPGLDV-EPGQYVGVLALTVPKSATAPA-TEGADLFLSGEDGPTSRLLATRIDLRRGQSTTITFQFDLPDATDEVVVLPSARVPP 612
BLAST of mRNA_M-pyrifera_M_contig86755.20179.1 vs. uniprot
Match: L7VQJ6_9BACT (Methyl-accepting chemotaxis protein n=1 Tax=uncultured bacterium A1Q1_fos_568 TaxID=1256586 RepID=L7VQJ6_9BACT) HSP 1 Score: 112 bits (281), Expect = 1.190e-24 Identity = 91/267 (34.08%), Postives = 126/267 (47.19%), Query Frame = 1 Query: 13 VDGAIMVDTHALSRLLGVVGTVEIDGTT-----YSEDTLLDYLLRGQYAAFGDSDREQEQRRIELASVTSAVFDTIIAGPHDPARLVEVVPSLLSGRHLLVYSEVPEQQAAWVEVGADGSSDGRQVGAYVLNLGASKLDPYLAV----DVRVTEETLGDTTVLDMRIDIRNEVENADRLPSYVVGPWEWIDLNEPGEYLGRLAVVLPGSTIEAAFVSDVPLEVFGPDGQGLVLGTRFRVRPGATTTIRVRAEIPSLLDSGSLVPSTR 786 VDG I VD + RLL + G V++ +T Y D ++ L R QY +D E RR EL +V SAVFD LV ++ + RHLL++S P QQ +W E+G G + +LN G +KLDPY+ V DV E TV +++RN+ + LP YV GP E GEY+G LA+ +P S E S V G DG V+G+ + G + T+ E+P D +VP R Sbjct: 302 VDGVIAVDIVTVQRLLELTGPVDVTTSTGQVVTYDSDNVVALLAREQYF----TDLAPEDRRDELGTVASAVFDAFNEREIPATGLVSLITGSGAQRHLLMWSADPVQQRSWEELGIAGELPPEALMLALLNRGGNKLDPYMTVTADLDVEGVEAGRRRVTV---EVNMRNDA--PEWLPPYVAGPVEGSG-GVAGEYVGILALSVPKSATEPT-TSANGWAVIGEDGPTRVIGSNVAIPRGTSLTVTFGFELPEWEDELVVVPGAR 557
BLAST of mRNA_M-pyrifera_M_contig86755.20179.1 vs. uniprot
Match: A0A3S0BHJ5_9ACTN (DUF4012 domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A3S0BHJ5_9ACTN) HSP 1 Score: 107 bits (268), Expect = 7.010e-23 Identity = 82/266 (30.83%), Postives = 128/266 (48.12%), Query Frame = 1 Query: 13 VDGAIMVDTHALSRLLGVVGTVEIDGT-----TYSEDTLLDYLLRGQYAAFGDSDREQEQRRIELASVTSAVFDTIIAGPHDPARLVEVVPSLLSGRHLLVYSEVPEQQAAWVEVGADGSSDGRQVGAYVLNLGASKLDPYLAVDVRVTEETLGDTTVLDMRIDIRNEVENADRLPSYVVGPWEWIDLNEPGEYLGRLAVVLPGSTIEAAFVSDVPLEVFGPDGQGLVLGTRFRVRPGATTTIRVRAEIPSLLDSGSLVPSTRPRP 795 VDG I +D L RLL +VG V++ T T + D +L +L QY D +RR +L+ V AVF + ++P +L+ + S GRHL+++S+ P QQA W + A G+ + VLN G +KLD +L V +T + + I N LP +V GP+ +D GEY G +A+ +P T A L + G DG ++ R + G ++T+ + +IP+ D ++PS R P Sbjct: 325 VDGVIALDLVGLQRLLELVGPVDVVDTDGKPMTVTADNVLTEMLLKQYLGSDTVD----ERRDQLSVVAQAVFRALNERGYEPGQLLAALQSAGRGRHLMMWSDDPVQQAGWEALDASGALPRDALLLSVLNRGGNKLDQFLRVTADMTWTEGTGARRVSVAITATNTTPAG--LPRFVAGPFPGLD-TVAGEYRGVVALTIP-KTATAPAAEGAELFLSGEDGPTRLIAVRIALERGESSTVTLSFDIPARTDPVVVLPSARVPP 582
BLAST of mRNA_M-pyrifera_M_contig86755.20179.1 vs. uniprot
Match: UPI000CFC035C (DUF4012 domain-containing protein n=1 Tax=Microbacterium halophytorum TaxID=2067568 RepID=UPI000CFC035C) HSP 1 Score: 72.4 bits (176), Expect = 8.930e-11 Identity = 68/263 (25.86%), Postives = 119/263 (45.25%), Query Frame = 1 Query: 1 TDSTVDGAIMVDTHALSRLLGVVGTVEI-DGTTYSEDTLLDYLLRGQYAAFGDSDREQEQRRIELASVTSAVFDTIIAGPHDPARLVEVVPSLLSGRHLLVYSEVPEQQAAWVEVGADGS-----SDGRQVGAYVLNLGASKLDPYLAVDVRVTEETLGDTTVLDMRIDIRNEVENADRLPSYVVGPWEWIDLNEPGEYLGRLAVVL-------PGSTIEAAFVSDVPLEV-FGPDGQGLVLGTRFRVRPGATTTIRVRAEIP 747 T ++DG + +D LS +LGV G V DGT +ED +++ LL Y + EQ+ + + V + VF+T+ AG +D +++ + + L + + VE+G DG+ ++ +VG ++ + ASKL+ +L DVRV+ + T D I + N V + + Y +G + G + + +L PGS I + D P G + + V+ R+ V G + T + IP Sbjct: 322 TGESLDGVMSLDPVVLSHILGVTGPVTASDGTELTEDNVVEQLLYETYVRYPG-----EQQDLFFSDVAARVFETVAAGDYDALAMLDALSQGAEEQRLNAWFPDEASEDLMVELGIDGALPTDNAETTEVGIFLNDYAASKLEYFLESDVRVSCDAGAGTMTTD--ITVANNVP-PEGMTEYQLG------IRNKGYGIPTTSFILDTMYFAPPGSEITESTPGDDPGATRTGVERERNVVSNRYFVASGESRTFSFTSTIP 570
BLAST of mRNA_M-pyrifera_M_contig86755.20179.1 vs. uniprot
Match: A0A1Y4DSX4_9ACTN (Uncharacterized protein n=6 Tax=Collinsella TaxID=102106 RepID=A0A1Y4DSX4_9ACTN) HSP 1 Score: 68.6 bits (166), Expect = 1.880e-9 Identity = 66/196 (33.67%), Postives = 94/196 (47.96%), Query Frame = 1 Query: 13 VDGAIMVDTHALSRLLGVVGTVEI-DGTTYSEDTLLDYLLRGQYAAFGDSDREQEQRRIELASVTSAVFDTIIAG--PHDPARLVEVVPSLLSGRHLLVYSEVPEQQAAWVEVGAD------GSSDG-RQVGAYVLNLGASKLDPYLAVDVRVTEETL-GD-TTVLDMRIDIRNEVENAD--RLPSYVVGPWEWID 558 VDG I +D L LLG+VG V + DGT L+ Y + QE+ ASV A FD I++G D A LV+V +V+ E +++ A ++G G DG + G Y+ N+G SK+D YL ++V V+ GD TT D+ +DI N A+ LP YV G +W+D Sbjct: 438 VDGVIALDPVFLQYLLGLVGGVTLPDGTAVDGTNAATVLMHDVYWNY-----PQEESDAIFASVAQAAFDRILSGIGEADMAGLVQVFARGCDEGRFIVWMEDADEEQAIEDMGIANELPDAGDVDGVPEAGVYLNNVGYSKMDWYLDLNVDVSSGMKRGDGTTTYDVTVDIANTCTEAEAANLPGYV-GVNKWMD 627
BLAST of mRNA_M-pyrifera_M_contig86755.20179.1 vs. uniprot
Match: A0A653RCJ5_9ACTN (Uncharacterized protein n=1 Tax=Aeromicrobium sp. 9AM TaxID=2653126 RepID=A0A653RCJ5_9ACTN) HSP 1 Score: 60.5 bits (145), Expect = 8.850e-7 Identity = 52/185 (28.11%), Postives = 80/185 (43.24%), Query Frame = 1 Query: 13 VDGAIMVDTHALSRLLGVVGTVEI-DGTTYSEDTLLDYLLRGQYAAFGDSDREQEQRRIELASVTSAVFDTIIAGPHDPARLVEVVPSLLSGRHLLVYSEVPEQQA--AWVEVGA---DGSSDGRQVGAYVLNLGASKLDPYLAVDVRVTE---ETLGDTTVLDMRIDIRNEVENADRLPSYVVG 540 VDG + +D ALS LL G ++ D TT + D +D LL YA + D ++ + A +FD + G D ++E + +L++S +QA A E+ G + QVG Y+ + ASK+ YL VDV + G T+ +A LP Y+ G Sbjct: 324 VDGVLSIDPVALSFLLKGTGPIKAADNTTLTSDNAVDILLNDVYARYPDPTKQD----VFFADSAKRIFDAVTHGKGDSRTVLEKLAKAADEHRVLLWSARKSEQAELAPTEISGAFPTGKAAHPQVGVYMNDSTASKMQYYLDVDVSARSVRCTSAGAQTIQLTTTYTSTAPADASELPEYITG 504 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86755.20179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86755.20179.1 >prot_M-pyrifera_M_contig86755.20179.1 ID=prot_M-pyrifera_M_contig86755.20179.1|Name=mRNA_M-pyrifera_M_contig86755.20179.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp MVDTHALSRLLGVVGTVEIDGTTYSEDTLLDYLLRGQYAAFGDSDREQEQback to top mRNA from alignment at M-pyrifera_M_contig86755:6..800+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86755.20179.1 ID=mRNA_M-pyrifera_M_contig86755.20179.1|Name=mRNA_M-pyrifera_M_contig86755.20179.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=795bp|location=Sequence derived from alignment at M-pyrifera_M_contig86755:6..800+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86755:6..800+ >mRNA_M-pyrifera_M_contig86755.20179.1 ID=mRNA_M-pyrifera_M_contig86755.20179.1|Name=mRNA_M-pyrifera_M_contig86755.20179.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1536bp|location=Sequence derived from alignment at M-pyrifera_M_contig86755:6..800+ (Macrocystis pyrifera P11B4 male)back to top |