prot_M-pyrifera_M_contig86724.20175.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86724.20175.1
Unique Nameprot_M-pyrifera_M_contig86724.20175.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length198
Homology
BLAST of mRNA_M-pyrifera_M_contig86724.20175.1 vs. uniprot
Match: A0A813AXB8_9DINO (RNA helicase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AXB8_9DINO)

HSP 1 Score: 296 bits (758), Expect = 6.300e-97
Identity = 146/198 (73.74%), Postives = 170/198 (85.86%), Query Frame = 0
Query:    1 QIPQYLVNAGFGESGLVACTQPRRVAAMSVATRVAEEMDVDLGAEVGYTIRFDDCSSPRTVLKYMTDGMLLREAMADPRLEGYSVVLLDEAHERTLATDVLMGLLKEVLAARPSLKLVVMSATLDALKFQRYFEGAPLIKVPGRTFPVQVFYTASPERDYVEAAIRTVLMIHQHEEPGDVLVFLTGEAEIEEACNRIR 198
            QIPQ+LVNAGFG+  ++ACTQPRRVAAMSVA RVA+EMDV +G EVGY+ RF+D +S RTVLK+MTDGMLLREAM DP+L  YSV++LDEAHERTLATDVLMGLLKE+LA R  +KLVVMSATLDA+KFQRYF+ AP + +PGR  PV++FYT  PERDYVEA+IRTVL IHQ E  GDVL+FLTGE EIEE C R+R
Sbjct:   56 QIPQFLVNAGFGKGKVIACTQPRRVAAMSVAQRVADEMDVMIGEEVGYSFRFEDVTSERTVLKFMTDGMLLREAMTDPKLSRYSVIILDEAHERTLATDVLMGLLKEILAKRKDIKLVVMSATLDAVKFQRYFDNAPAMVIPGRLHPVEIFYTPEPERDYVEASIRTVLQIHQSEPAGDVLLFLTGEREIEETCTRLR 253          
BLAST of mRNA_M-pyrifera_M_contig86724.20175.1 vs. uniprot
Match: UPI000BBE1DD0 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI000BBE1DD0)

HSP 1 Score: 292 bits (748), Expect = 2.170e-94
Identity = 149/201 (74.13%), Postives = 170/201 (84.58%), Query Frame = 0
Query:    1 QIPQYLVNAGFGESG----LVACTQPRRVAAMSVATRVAEEMDVDLGAEVGYTIRFDDCSSPRTVLKYMTDGMLLREAMADPRLEGYSVVLLDEAHERTLATDVLMGLLKEVLAARPSLKLVVMSATLDALKFQRYFEGAPLIKVPGRTFPVQVFYTASPERDYVEAAIRTVLMIHQHEEPGDVLVFLTGEAEIEEACNRI 197
            QIPQ++++A   ES     LVACTQPRRVAAMSV+ RVA+EMDV +G EVGY+IRF+DCSSPRTVLKY+TDGMLLREAMADP LE Y V++LDEAHERTLATDVL GLLKEVL  RP LKLVVMSATL+A KFQ YF GAPL+KVPGR  PV++FYT  PERDY+EAAIRTV+ IH  E PGD+LVFLTGE EIE+AC +I
Sbjct:   88 QIPQFVIDAVDAESSDSKWLVACTQPRRVAAMSVSRRVADEMDVAIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKI 288          
BLAST of mRNA_M-pyrifera_M_contig86724.20175.1 vs. uniprot
Match: A0A813A0P0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A0P0_9DINO)

HSP 1 Score: 296 bits (757), Expect = 1.920e-93
Identity = 151/201 (75.12%), Postives = 172/201 (85.57%), Query Frame = 0
Query:    1 QIPQYLVNAGFGESG---LVACTQPRRVAAMSVATRVAEEMDVDLGAEVGYTIRFDDCSSPRTVLKYMTDGMLLREAMADPRLEGYSVVLLDEAHERTLATDVLMGLLKEVLAARPSLKLVVMSATLDALKFQRYFEGAPLIKVPGRTFPVQVFYTASPERDYVEAAIRTVLMIHQHEEPGDVLVFLTGEAEIEEACNRIR 198
            QIPQYLV+AGFG +    +VACTQPRRVAAMS+A RVA+EMDV LG +VGYTIRF+D +   T LKYMTDGMLLREAMADP+LE Y VV+LDEAHERTLATDVLMGLLKEVL  RP LKLVVMSATLDA KFQ+YF+GAPL KVPGRTFPV VF+T   ++DY++AAI T L IHQ+EEPGDVL+FLTGE EIE+AC +IR
Sbjct:   83 QIPQYLVHAGFGRATGDRMVACTQPRRVAAMSIAQRVADEMDVKLGEQVGYTIRFEDVTCDSTQLKYMTDGMLLREAMADPKLERYGVVVLDEAHERTLATDVLMGLLKEVLLVRPDLKLVVMSATLDAAKFQQYFDGAPLYKVPGRTFPVDVFFTPEAQQDYLDAAITTALHIHQYEEPGDVLIFLTGEKEIEDACAQIR 283          
BLAST of mRNA_M-pyrifera_M_contig86724.20175.1 vs. uniprot
Match: UPI00098DFD5D (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 isoform X3 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098DFD5D)

HSP 1 Score: 291 bits (744), Expect = 3.140e-93
Identity = 146/198 (73.74%), Postives = 169/198 (85.35%), Query Frame = 0
Query:    1 QIPQYLVNA-GFGESGLVACTQPRRVAAMSVATRVAEEMDVDLGAEVGYTIRFDDCSSPRTVLKYMTDGMLLREAMADPRLEGYSVVLLDEAHERTLATDVLMGLLKEVLAARPSLKLVVMSATLDALKFQRYFEGAPLIKVPGRTFPVQVFYTASPERDYVEAAIRTVLMIHQHEEPGDVLVFLTGEAEIEEACNRI 197
            QIPQ+++   G G+ G+VACTQPRRVAAMSV+ RVAEEMDV +G EVGY+IRF+DCSS +T+LKY+TDGMLLREAMADP LE Y V++LDEAHERTLATDVL GLLKEVL  RP LKLVVMSATL+A KFQ YF GAPL+KVPGR  PV++FYT  PERDY+EAAIRTV+ IH  E PGD+LVFLTGE EIE+AC +I
Sbjct:  100 QIPQFVLEYDGLGKRGMVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKTILKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQDPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKI 297          
BLAST of mRNA_M-pyrifera_M_contig86724.20175.1 vs. uniprot
Match: A0A6A7GAK4_9CRUS (RNA helicase (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GAK4_9CRUS)

HSP 1 Score: 287 bits (735), Expect = 3.970e-93
Identity = 143/198 (72.22%), Postives = 166/198 (83.84%), Query Frame = 0
Query:    1 QIPQYLVNAGFG-ESGLVACTQPRRVAAMSVATRVAEEMDVDLGAEVGYTIRFDDCSSPRTVLKYMTDGMLLREAMADPRLEGYSVVLLDEAHERTLATDVLMGLLKEVLAARPSLKLVVMSATLDALKFQRYFEGAPLIKVPGRTFPVQVFYTASPERDYVEAAIRTVLMIHQHEEPGDVLVFLTGEAEIEEACNRI 197
            QIPQ+L++ G+  + G++ACTQPRRVAAMSVA RVA E+DV LG EVGYTIRFDDCSS +T LKYMTDGMLLREAM+DP L  YS +LLDEAHERT++TDVLMGL+KEVL  R  +KL+VMSATLDA KFQ+YFEGAPL+KVPGR  PV++FYT  PERDY EAA+RTVL IH  E  GD+LVFLTGE EIE+ C RI
Sbjct:   85 QIPQFLLSEGYASKKGIIACTQPRRVAAMSVAKRVAAELDVSLGEEVGYTIRFDDCSSQKTKLKYMTDGMLLREAMSDPILRRYSAILLDEAHERTVSTDVLMGLIKEVLKRRDDIKLIVMSATLDAKKFQKYFEGAPLLKVPGRLHPVEIFYTPEPERDYFEAALRTVLQIHMCEPEGDILVFLTGEQEIEQGCRRI 282          
BLAST of mRNA_M-pyrifera_M_contig86724.20175.1 vs. uniprot
Match: A0A1I9LLI5_ARATH (RNA helicase n=5 Tax=Brassicaceae TaxID=3700 RepID=A0A1I9LLI5_ARATH)

HSP 1 Score: 290 bits (741), Expect = 1.940e-92
Identity = 148/203 (72.91%), Postives = 169/203 (83.25%), Query Frame = 0
Query:    1 QIPQYLVNAGFGESG------LVACTQPRRVAAMSVATRVAEEMDVDLGAEVGYTIRFDDCSSPRTVLKYMTDGMLLREAMADPRLEGYSVVLLDEAHERTLATDVLMGLLKEVLAARPSLKLVVMSATLDALKFQRYFEGAPLIKVPGRTFPVQVFYTASPERDYVEAAIRTVLMIHQHEEPGDVLVFLTGEAEIEEACNRI 197
            QIPQ++++A   E+       LV CTQPRRVAAMSV+ RVAEEMDV +G EVGY+IRF+DCSSPRTVLKY+TDGMLLREAMADP LE Y V++LDEAHERTLATDVL GLLKEVL  RP LKLVVMSATL+A KFQ YF GAPL+KVPGR  PV++FYT  PERDY+EAAIRTV+ IH  E PGD+LVFLTGE EIE+AC +I
Sbjct:   93 QIPQFVIDAVDAETSDKRRKWLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKI 295          
BLAST of mRNA_M-pyrifera_M_contig86724.20175.1 vs. uniprot
Match: A0A4D9DBT4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBT4_9STRA)

HSP 1 Score: 292 bits (748), Expect = 2.780e-92
Identity = 146/199 (73.37%), Postives = 170/199 (85.43%), Query Frame = 0
Query:    1 QIPQYLVNAGFGESGL-VACTQPRRVAAMSVATRVAEEMDVDLGAEVGYTIRFDDCSSPRTVLKYMTDGMLLREAMADPRLEGYSVVLLDEAHERTLATDVLMGLLKEVLAARPSLKLVVMSATLDALKFQRYFEGAPLIKVPGRTFPVQVFYTASPERDYVEAAIRTVLMIHQHEEPGDVLVFLTGEAEIEEACNRIR 198
            QIPQ+LV+AG+   G  VACTQPRRVAAMS+A RV+EEMDV +G EVGYTIRF+DCS P+TVLK++TDGMLLREAM DP L+ Y V++LDEAHERTLATDVLMGLLK+VL  RP +K+VVMSATLDA KFQ+YF  APL++VPGR F V+VFYT  PERDYV+AAIRT L IH  EEPGD+LVFLTGE EIE+AC +IR
Sbjct:  101 QIPQFLVDAGYTRDGYCVACTQPRRVAAMSIAKRVSEEMDVTMGEEVGYTIRFEDCSGPKTVLKFLTDGMLLREAMFDPMLKKYKVIVLDEAHERTLATDVLMGLLKDVLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTPEPERDYVQAAIRTALQIHLCEEPGDILVFLTGEEEIEDACRKIR 299          
BLAST of mRNA_M-pyrifera_M_contig86724.20175.1 vs. uniprot
Match: A0A6J0P5Z6_RAPSA (RNA helicase n=9 Tax=Brassicaceae TaxID=3700 RepID=A0A6J0P5Z6_RAPSA)

HSP 1 Score: 288 bits (737), Expect = 2.930e-92
Identity = 147/203 (72.41%), Postives = 168/203 (82.76%), Query Frame = 0
Query:    1 QIPQYLVNAGFGESG------LVACTQPRRVAAMSVATRVAEEMDVDLGAEVGYTIRFDDCSSPRTVLKYMTDGMLLREAMADPRLEGYSVVLLDEAHERTLATDVLMGLLKEVLAARPSLKLVVMSATLDALKFQRYFEGAPLIKVPGRTFPVQVFYTASPERDYVEAAIRTVLMIHQHEEPGDVLVFLTGEAEIEEACNRI 197
            QIPQ++++A   E        LV CTQPRRVAAMSV+ RVA+EMDV +G EVGY+IRF+DCSSPRTVLKY+TDGMLLREAMADP LE Y V++LDEAHERTLATDVL GLLKEVL  RP LKLVVMSATL+A KFQ YF GAPL+KVPGR  PV++FYT  PERDY+EAAIRTV+ IH  E PGD+LVFLTGE EIE+AC +I
Sbjct:   89 QIPQFVIDAVDAEFSHKHKKWLVGCTQPRRVAAMSVSRRVADEMDVAIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLGNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKI 291          
BLAST of mRNA_M-pyrifera_M_contig86724.20175.1 vs. uniprot
Match: UPI000870A5E7 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X2 n=1 Tax=Pyrus x bretschneideri TaxID=225117 RepID=UPI000870A5E7)

HSP 1 Score: 289 bits (739), Expect = 3.680e-92
Identity = 147/203 (72.41%), Postives = 169/203 (83.25%), Query Frame = 0
Query:    1 QIPQYLVNAGFGESG------LVACTQPRRVAAMSVATRVAEEMDVDLGAEVGYTIRFDDCSSPRTVLKYMTDGMLLREAMADPRLEGYSVVLLDEAHERTLATDVLMGLLKEVLAARPSLKLVVMSATLDALKFQRYFEGAPLIKVPGRTFPVQVFYTASPERDYVEAAIRTVLMIHQHEEPGDVLVFLTGEAEIEEACNRI 197
            QIPQ+++ A   ES       +VACTQPRRVAAMSV+ RVAEEMDV +G EVGY+IRF+DCSS RTVLKY+TDGMLLREAM DP LE YSV++LDEAHERTLATDVL GLLKEVL  RP LK+VVMSATL+A KFQ YF GAPL+KVPGR  PV++FYT  PERDY+EAAIRTV+ IH +E PGD+LVFLTGE EIE+AC +I
Sbjct:   99 QIPQFVLEAVHSESSDKRKKMMVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYSVIILDEAHERTLATDVLFGLLKEVLRNRPDLKVVVMSATLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTEEPERDYLEAAIRTVVQIHMYETPGDILVFLTGEEEIEDACRKI 301          
BLAST of mRNA_M-pyrifera_M_contig86724.20175.1 vs. uniprot
Match: A0A5A8D5N5_CAFRO (Uncharacterized protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8D5N5_CAFRO)

HSP 1 Score: 293 bits (750), Expect = 4.050e-92
Identity = 151/201 (75.12%), Postives = 174/201 (86.57%), Query Frame = 0
Query:    1 QIPQYLVNAGFG-ESG--LVACTQPRRVAAMSVATRVAEEMDVDLGAEVGYTIRFDDCSSPRTVLKYMTDGMLLREAMADPRLEGYSVVLLDEAHERTLATDVLMGLLKEVLAARPSLKLVVMSATLDALKFQRYFEGAPLIKVPGRTFPVQVFYTASPERDYVEAAIRTVLMIHQHEEPGDVLVFLTGEAEIEEACNRIR 198
            QIPQ+LV+AG G E+G  LV CTQPRRVAAMS+A RVA+EMDV LG EVGYTIRF+D +S  TVLK+MTDGMLLREAMADP LE Y V++LDEAHERTL+TDVLMGLLKEVLA R  LK+VVMSATLDA KFQ YF+GAPL+KVPGRTFPV+ ++ A PERDY+EAA+RTV+ IHQ E  GD+L+FLTGEAEIEEAC R+R
Sbjct:   86 QIPQFLVHAGLGTEAGGKLVGCTQPRRVAAMSIAQRVADEMDVKLGEEVGYTIRFEDVTSDSTVLKFMTDGMLLREAMADPELEKYGVIVLDEAHERTLSTDVLMGLLKEVLARRSDLKVVVMSATLDAGKFQDYFDGAPLLKVPGRTFPVETYFAAQPERDYLEAALRTVVQIHQSEPEGDILLFLTGEAEIEEACFRLR 286          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86724.20175.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A813AXB8_9DINO6.300e-9773.74RNA helicase n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
UPI000BBE1DD02.170e-9474.13probable pre-mRNA-splicing factor ATP-dependent RN... [more]
A0A813A0P0_9DINO1.920e-9375.12Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
UPI00098DFD5D3.140e-9373.74probable pre-mRNA-splicing factor ATP-dependent RN... [more]
A0A6A7GAK4_9CRUS3.970e-9372.22RNA helicase (Fragment) n=1 Tax=Hirondellea gigas ... [more]
A0A1I9LLI5_ARATH1.940e-9272.91RNA helicase n=5 Tax=Brassicaceae TaxID=3700 RepID... [more]
A0A4D9DBT4_9STRA2.780e-9273.37Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A6J0P5Z6_RAPSA2.930e-9272.41RNA helicase n=9 Tax=Brassicaceae TaxID=3700 RepID... [more]
UPI000870A5E73.680e-9272.41probable pre-mRNA-splicing factor ATP-dependent RN... [more]
A0A5A8D5N5_CAFRO4.050e-9275.12Uncharacterized protein n=2 Tax=Sar TaxID=2698737 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 1..151
e-value: 1.1E-4
score: 31.5
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..142
score: 14.81
NoneNo IPR availableGENE3D3.40.50.300coord: 1..144
e-value: 2.7E-67
score: 228.3
NoneNo IPR availableGENE3D3.40.50.300coord: 145..198
e-value: 1.9E-16
score: 62.1
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 8..197
NoneNo IPR availablePANTHERPTHR18934:SF217PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DEAH3-RELATEDcoord: 8..197
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 84..93
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86724contigM-pyrifera_M_contig86724:4..597 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86724.20175.1mRNA_M-pyrifera_M_contig86724.20175.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86724 4..597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86724.20175.1 ID=prot_M-pyrifera_M_contig86724.20175.1|Name=mRNA_M-pyrifera_M_contig86724.20175.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=198bp
QIPQYLVNAGFGESGLVACTQPRRVAAMSVATRVAEEMDVDLGAEVGYTI
RFDDCSSPRTVLKYMTDGMLLREAMADPRLEGYSVVLLDEAHERTLATDV
LMGLLKEVLAARPSLKLVVMSATLDALKFQRYFEGAPLIKVPGRTFPVQV
FYTASPERDYVEAAIRTVLMIHQHEEPGDVLVFLTGEAEIEEACNRIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR002464DNA/RNA_helicase_DEAH_CS
IPR027417P-loop_NTPase