prot_M-pyrifera_M_contig86720.20172.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig86720.20172.1
Unique Name	prot_M-pyrifera_M_contig86720.20172.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	108

Homology

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BLAST of mRNA_M-pyrifera_M_contig86720.20172.1 vs. uniprot
Match: A0A482UN69_9ARCH (START domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UN69_9ARCH)

HSP 1 Score: 94.0 bits (232), Expect = 4.020e-21
Identity = 51/107 (47.66%), Postives = 59/107 (55.14%), Query Frame = 0

Query:    1 ADQVADAITDLELYASWDRSWEQVQPVR-LLDHHNQILRFVADQPPPPVSNILTQRDFVMSRDFRRDPDTGTFVVLFRNVQHRRSPPLPDKIRANTLGVIGFVVRSV 106
            A    DAIT LE Y  WDR+W  VQP+   LD  N    F+AD PPPP S ++  RDFVM R   RDP  G  V + RN  HR  P  P  IR  TL  +GF+V  V
Sbjct:   66 AQDAFDAITRLEKYRRWDRTWHLVQPIGDPLDAFNAAYYFIADSPPPPYSYLIVARDFVMLRFTYRDPYAGINVDVLRNACHRAKPADPVYIRGETLSCVGFMVTPV 172

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig86720.20172.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig86720.20172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A482UN69_9ARCH	4.020e-21	47.66	START domain-containing protein (Fragment) n=1 Tax...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002913	START domain	PFAM	PF01852	START	coord: 2..96 e-value: 4.7E-6 score: 26.1
IPR002913	START domain	PROSITE	PS50848	START	coord: 1..108 score: 17.767
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 1..108 e-value: 7.3E-17 score: 63.8
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 1..96

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig86720	contig	M-pyrifera_M_contig86720:9..332 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig86720.20172.1	mRNA_M-pyrifera_M_contig86720.20172.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig86720 9..332 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig86720.20172.1 ID=prot_M-pyrifera_M_contig86720.20172.1|Name=mRNA_M-pyrifera_M_contig86720.20172.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp
ADQVADAITDLELYASWDRSWEQVQPVRLLDHHNQILRFVADQPPPPVSN
ILTQRDFVMSRDFRRDPDTGTFVVLFRNVQHRRSPPLPDKIRANTLGVIG
FVVRSVPS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002913	START_lipid-bd_dom
IPR023393	START-like_dom_sf