mRNA_M-pyrifera_M_contig86577.20144.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86577.20144.1
Unique NamemRNA_M-pyrifera_M_contig86577.20144.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig86577.20144.1 vs. uniprot
Match: A0A2E2BAF9_9GAMM (Cytochrome c oxidase subunit 1 n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E2BAF9_9GAMM)

HSP 1 Score: 530 bits (1365), Expect = 7.250e-186
Identity = 260/281 (92.53%), Postives = 271/281 (96.44%), Query Frame = 1 
Query:    1 LPFAFTLLLSTLFMPGGGPAGGWTMYPPLVLQTGDAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLMKLPLFVWTWIITAFLLIASIPVLAGGVTMLLTDKFFGTAFFAAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIASAIIPTFARKPLFGYASMVYASAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTILIAVPTGVKVFNWCATMWQSSMTFEVPMLFAIAFVILFTIGGFSGLMLGITPVDFQYHDTYFVVAHFHYVLVTGAVYS 843
            LPFAFT+LLSTLFMPGG PAGGWTMYPPLVLQTGDAFPFLIFAVHFMGASSIAGAIN++ATV NMRAPGMTLMKLPLFVWTWIIT FLLIASIPVLAG VTMLLTDKFFGTAFF+AAGGGDPVMFQHIFWFFGHPEVYILILPAFGI SAIIPTFARKPLFGY+SMVYA+ AIAFLSFIVWAHHMFTVGMPLAGELFFMYTT+LIAVPTGVKVFNW ATMWQSSMTFE PMLFA+ FVILFTIGGFSGLMLG+TPVDFQYHDTY VVAHFHYVLVTGAV++
Sbjct:  121 LPFAFTMLLSTLFMPGGAPAGGWTMYPPLVLQTGDAFPFLIFAVHFMGASSIAGAINVVATVXNMRAPGMTLMKLPLFVWTWIITGFLLIASIPVLAGAVTMLLTDKFFGTAFFSAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIVSAIIPTFARKPLFGYSSMVYATGAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMWQSSMTFETPMLFALGFVILFTIGGFSGLMLGVTPVDFQYHDTYXVVAHFHYVLVTGAVFA 401
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BLAST of mRNA_M-pyrifera_M_contig86577.20144.1 vs. uniprot
Match: A0A1Z8WVA7_9GAMM (Cytochrome c oxidase subunit 1 n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WVA7_9GAMM)

HSP 1 Score: 518 bits (1334), Expect = 3.700e-181
Identity = 252/281 (89.68%), Postives = 268/281 (95.37%), Query Frame = 1 
Query:    1 LPFAFTLLLSTLFMPGGGPAGGWTMYPPLVLQTGDAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLMKLPLFVWTWIITAFLLIASIPVLAGGVTMLLTDKFFGTAFFAAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIASAIIPTFARKPLFGYASMVYASAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTILIAVPTGVKVFNWCATMWQSSMTFEVPMLFAIAFVILFTIGGFSGLMLGITPVDFQYHDTYFVVAHFHYVLVTGAVYS 843
            LPFAF+LLL TLF+PGG PAGGWTMYPPLVLQTG AFPFLIFAVHF+GASSI GAIN++ATVFNMRAPGMTL+KLPLFVWTWIIT FLLIAS+PVLAG VTMLLTDK+FGT+FF+AAGGGDPVMFQHIFWFFGHPEVYILILPAFG+ SAIIPTFARKPLFGY SMVYA AAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTILIAVPTGVKVFNW ATMW+ +MTFE PMLFA+ FVILFTIGGFSGLMLG+TPVDFQYHDTYFVVAHFHYVLVTGA+YS
Sbjct:  121 LPFAFSLLLLTLFIPGGAPAGGWTMYPPLVLQTGAAFPFLIFAVHFLGASSIGGAINVLATVFNMRAPGMTLLKLPLFVWTWIITGFLLIASLPVLAGAVTMLLTDKYFGTSFFSAAGGGDPVMFQHIFWFFGHPEVYILILPAFGVVSAIIPTFARKPLFGYQSMVYAVAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTILIAVPTGVKVFNWVATMWKGAMTFETPMLFALGFVILFTIGGFSGLMLGVTPVDFQYHDTYFVVAHFHYVLVTGAIYS 401
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BLAST of mRNA_M-pyrifera_M_contig86577.20144.1 vs. uniprot
Match: A0A351MCL8_9GAMM (Cytochrome c oxidase subunit 1 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A351MCL8_9GAMM)

HSP 1 Score: 509 bits (1310), Expect = 1.330e-177
Identity = 247/281 (87.90%), Postives = 264/281 (93.95%), Query Frame = 1 
Query:    1 LPFAFTLLLSTLFMPGGGPAGGWTMYPPLVLQTGDAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLMKLPLFVWTWIITAFLLIASIPVLAGGVTMLLTDKFFGTAFFAAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIASAIIPTFARKPLFGYASMVYASAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTILIAVPTGVKVFNWCATMWQSSMTFEVPMLFAIAFVILFTIGGFSGLMLGITPVDFQYHDTYFVVAHFHYVLVTGAVYS 843
            +PFAF LLLSTLF+PGG PAGGWTMY PLVLQTG+AFPFLI AVH MG SS+ GAINIIAT+FNMRAPG+T MKLPLFVWTWIITAFLLI SIPVLAG VTMLLTDK+FGT+FF AAGGGDPVMFQHIFWFFGHPEVYI+ILPAFGI SAIIPTFARKPLFGY SMVYA+A+IAFLSFIVWAHHMFTVGMPLAGELFFMYTT+LIAVPTGVKVFNW ATMW+ SMTFE PMLFA+ FV+LFTIGGFSGLMLG+TPVDFQYHDTYFVVAHFHYVLVTGAV+S
Sbjct:  122 MPFAFLLLLSTLFLPGGAPAGGWTMYAPLVLQTGEAFPFLILAVHMMGISSVLGAINIIATIFNMRAPGLTYMKLPLFVWTWIITAFLLITSIPVLAGAVTMLLTDKYFGTSFFNAAGGGDPVMFQHIFWFFGHPEVYIMILPAFGIVSAIIPTFARKPLFGYESMVYATASIAFLSFIVWAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMWRGSMTFETPMLFALGFVVLFTIGGFSGLMLGVTPVDFQYHDTYFVVAHFHYVLVTGAVFS 402
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BLAST of mRNA_M-pyrifera_M_contig86577.20144.1 vs. uniprot
Match: A0A7C1H8R5_9GAMM (Cytochrome c oxidase subunit 1 n=1 Tax=Thioalkalivibrio sp. TaxID=2093813 RepID=A0A7C1H8R5_9GAMM)

HSP 1 Score: 502 bits (1292), Expect = 6.300e-175
Identity = 242/281 (86.12%), Postives = 265/281 (94.31%), Query Frame = 1 
Query:    1 LPFAFTLLLSTLFMPGGGPAGGWTMYPPLVLQTGDAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLMKLPLFVWTWIITAFLLIASIPVLAGGVTMLLTDKFFGTAFFAAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIASAIIPTFARKPLFGYASMVYASAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTILIAVPTGVKVFNWCATMWQSSMTFEVPMLFAIAFVILFTIGGFSGLMLGITPVDFQYHDTYFVVAHFHYVLVTGAVYS 843
            LPFAFT+LLSTLFM GGGPAGGWTMYPPL+LQTGDAFPF+IFA+H MG SSI G+IN+IAT+ NMRAPGM LMK+PLFVWTW+ITA+LLIA++PVLAG VTMLLTDK+FGT+FF AAGGGDPVMFQHIFWFFGHPEVYILILPAFGIAS+IIPTFARKPLFGYASMVYA+A+IAFLSFIVWAHHMFTVGMPLAGELFFM TT++IAVPTGVKVFNW ATMW+ SMTFE PMLFA+ FVI+FTIGGFSGLML I PVDFQYHDTYFVVAHFHYVLV GAV+S
Sbjct:  118 LPFAFTMLLSTLFMDGGGPAGGWTMYPPLMLQTGDAFPFVIFAIHLMGISSIMGSINVIATILNMRAPGMNLMKMPLFVWTWLITAYLLIATMPVLAGAVTMLLTDKYFGTSFFNAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIASSIIPTFARKPLFGYASMVYATASIAFLSFIVWAHHMFTVGMPLAGELFFMLTTMMIAVPTGVKVFNWVATMWKGSMTFETPMLFALGFVIMFTIGGFSGLMLAIAPVDFQYHDTYFVVAHFHYVLVPGAVFS 398
[Close]
BLAST of mRNA_M-pyrifera_M_contig86577.20144.1 vs. uniprot
Match: B6BV08_9PROT (Cytochrome c oxidase subunit 1 n=6 Tax=Bacteria TaxID=2 RepID=B6BV08_9PROT)

HSP 1 Score: 502 bits (1292), Expect = 7.720e-175
Identity = 244/281 (86.83%), Postives = 261/281 (92.88%), Query Frame = 1 
Query:    1 LPFAFTLLLSTLFMPGGGPAGGWTMYPPLVLQTGDAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLMKLPLFVWTWIITAFLLIASIPVLAGGVTMLLTDKFFGTAFFAAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIASAIIPTFARKPLFGYASMVYASAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTILIAVPTGVKVFNWCATMWQSSMTFEVPMLFAIAFVILFTIGGFSGLMLGITPVDFQYHDTYFVVAHFHYVLVTGAVYS 843
            LPF F LL+STLFM GGGPAGGWTMYPPLVLQ GDAFPFLIF VH +G SSI GAINIIATVFNMRAPGMTLMK+PLFVWTW+ITAFLLIAS+PVLAG VTMLLTDK+FGT+FF AAGGGDPV+FQHIFWFFGHPEVYIL LPAFGI S IIPTFARKPLFGYASMVYA+A+IA LSF VWAHHMFTVGMP+ GELFFMY T+LIAVPTGVKVFNW ATMW+ +MTFE PMLF+IAFVILFTIGGFSGLMLGITPVDFQYHDTYFVVAHFHYVL+TGAV+S
Sbjct:  118 LPFGFALLISTLFMNGGGPAGGWTMYPPLVLQLGDAFPFLIFTVHILGVSSIMGAINIIATVFNMRAPGMTLMKMPLFVWTWVITAFLLIASLPVLAGAVTMLLTDKYFGTSFFNAAGGGDPVLFQHIFWFFGHPEVYILALPAFGIVSTIIPTFARKPLFGYASMVYATASIAILSFFVWAHHMFTVGMPIKGELFFMYATMLIAVPTGVKVFNWMATMWRGAMTFEAPMLFSIAFVILFTIGGFSGLMLGITPVDFQYHDTYFVVAHFHYVLLTGAVFS 398
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BLAST of mRNA_M-pyrifera_M_contig86577.20144.1 vs. uniprot
Match: A0A833MTX2_9GAMM (Cytochrome c oxidase subunit 1 n=1 Tax=Alkalilimnicola sp. S0819 TaxID=2613922 RepID=A0A833MTX2_9GAMM)

HSP 1 Score: 501 bits (1289), Expect = 1.740e-174
Identity = 240/281 (85.41%), Postives = 265/281 (94.31%), Query Frame = 1 
Query:    1 LPFAFTLLLSTLFMPGGGPAGGWTMYPPLVLQTGDAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLMKLPLFVWTWIITAFLLIASIPVLAGGVTMLLTDKFFGTAFFAAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIASAIIPTFARKPLFGYASMVYASAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTILIAVPTGVKVFNWCATMWQSSMTFEVPMLFAIAFVILFTIGGFSGLMLGITPVDFQYHDTYFVVAHFHYVLVTGAVYS 843
            LPFAF +LLSTLFMPGGGPAGGWTMYPPL+LQTG AFPF+IFAVH MG SSI GAIN++ATV NMRAPGMTLMK+PLFVWTW+ITAFLLIA++PVLAG +TMLLTD++FGT+FF AAGGGDPV++QHIFWFFGHPEVYI+ILPAFGI S IIPTFARKPLFGY+SMVYA+A+IAFLSFIVWAHHMFTVGMPL+GELFFMY T+LI+VPTGVKVFNW ATMW+ +MTFE PMLFAIAFVILFTIGGFSGLML ITP DFQYHDTYFVVAHFHYVLVTGAV+S
Sbjct:  117 LPFAFIMLLSTLFMPGGGPAGGWTMYPPLMLQTGAAFPFVIFAVHLMGLSSIMGAINVVATVLNMRAPGMTLMKMPLFVWTWLITAFLLIATMPVLAGAITMLLTDQYFGTSFFNAAGGGDPVLYQHIFWFFGHPEVYIMILPAFGIVSTIIPTFARKPLFGYSSMVYATASIAFLSFIVWAHHMFTVGMPLSGELFFMYATMLISVPTGVKVFNWAATMWRGAMTFETPMLFAIAFVILFTIGGFSGLMLAITPADFQYHDTYFVVAHFHYVLVTGAVFS 397
[Close]
BLAST of mRNA_M-pyrifera_M_contig86577.20144.1 vs. uniprot
Match: A0A369CHJ4_9GAMM (Cytochrome c oxidase subunit 1 n=1 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369CHJ4_9GAMM)

HSP 1 Score: 501 bits (1289), Expect = 1.990e-174
Identity = 241/281 (85.77%), Postives = 264/281 (93.95%), Query Frame = 1 
Query:    1 LPFAFTLLLSTLFMPGGGPAGGWTMYPPLVLQTGDAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLMKLPLFVWTWIITAFLLIASIPVLAGGVTMLLTDKFFGTAFFAAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIASAIIPTFARKPLFGYASMVYASAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTILIAVPTGVKVFNWCATMWQSSMTFEVPMLFAIAFVILFTIGGFSGLMLGITPVDFQYHDTYFVVAHFHYVLVTGAVYS 843
            LPFAF +LLSTLF+ GGGPAGGWTMYPPL+LQTG+A PF+IFAVH MG SS+ GAIN+I TV NMRAPGMTLMK+PLFVWTW+ITAFLLIA++PVLAG VTMLLTD++FGTAFF AAGGGDPVM+QHIFWFFGHPEVYI+ILPAFGI S IIPTFARKPLFGY+SMVYA+A+IAFLSFIVWAHHMFTVGMPLAGELFFMYTT+LIAVPTGVKVFNW ATMW+ SMTFE PMLFAIAFV LFTIGGFSGLML ITPVDFQYHDTYFVVAHFHYVLVTGA+++
Sbjct:  121 LPFAFAMLLSTLFLTGGGPAGGWTMYPPLMLQTGEALPFVIFAVHLMGISSVMGAINVIVTVLNMRAPGMTLMKMPLFVWTWLITAFLLIAAMPVLAGAVTMLLTDRYFGTAFFNAAGGGDPVMYQHIFWFFGHPEVYIMILPAFGIVSQIIPTFARKPLFGYSSMVYATASIAFLSFIVWAHHMFTVGMPLAGELFFMYTTMLIAVPTGVKVFNWVATMWRGSMTFETPMLFAIAFVFLFTIGGFSGLMLAITPVDFQYHDTYFVVAHFHYVLVTGAIFA 401
[Close]
BLAST of mRNA_M-pyrifera_M_contig86577.20144.1 vs. uniprot
Match: A0A1G0JMD3_9GAMM (Cytochrome c oxidase subunit 1 n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11 TaxID=1798301 RepID=A0A1G0JMD3_9GAMM)

HSP 1 Score: 501 bits (1289), Expect = 2.520e-174
Identity = 239/281 (85.05%), Postives = 261/281 (92.88%), Query Frame = 1 
Query:    1 LPFAFTLLLSTLFMPGGGPAGGWTMYPPLVLQTGDAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLMKLPLFVWTWIITAFLLIASIPVLAGGVTMLLTDKFFGTAFFAAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIASAIIPTFARKPLFGYASMVYASAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTILIAVPTGVKVFNWCATMWQSSMTFEVPMLFAIAFVILFTIGGFSGLMLGITPVDFQYHDTYFVVAHFHYVLVTGAVYS 843
            LPFAFTLLLST FMPGG PAGGWTMYPPLVLQ GD FPFLIFA+HF+G SSI GAINIIATVFNMRAPGMT MKLPLFVWTWIITAFLLIA++PVLAG VTMLLTDKFFGT+FF+AAGGGDPVMFQH+FWFFGHPEVYILILPAFGI S IIP FARKPLFGY SMVYA+A+IAFLSF VWAHHMFTVGMPL GELFFMY T+ IAVPTGVK+FNW ATMW+ SMTFE PMLFA++FV+LF+IGGF+GLM+GITPVDFQYHDTYF+VAHFHYVLV GA+++
Sbjct:  122 LPFAFTLLLSTFFMPGGAPAGGWTMYPPLVLQLGDGFPFLIFAIHFLGISSILGAINIIATVFNMRAPGMTFMKLPLFVWTWIITAFLLIATMPVLAGSVTMLLTDKFFGTSFFSAAGGGDPVMFQHVFWFFGHPEVYILILPAFGIVSQIIPAFARKPLFGYESMVYATASIAFLSFFVWAHHMFTVGMPLTGELFFMYATMSIAVPTGVKIFNWVATMWKGSMTFETPMLFAVSFVVLFSIGGFTGLMMGITPVDFQYHDTYFIVAHFHYVLVPGAIFA 402
[Close]
BLAST of mRNA_M-pyrifera_M_contig86577.20144.1 vs. uniprot
Match: A0A426QK12_9GAMM (Cytochrome c oxidase subunit 1 n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A426QK12_9GAMM)

HSP 1 Score: 498 bits (1282), Expect = 2.220e-173
Identity = 238/281 (84.70%), Postives = 261/281 (92.88%), Query Frame = 1 
Query:    1 LPFAFTLLLSTLFMPGGGPAGGWTMYPPLVLQTGDAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLMKLPLFVWTWIITAFLLIASIPVLAGGVTMLLTDKFFGTAFFAAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIASAIIPTFARKPLFGYASMVYASAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTILIAVPTGVKVFNWCATMWQSSMTFEVPMLFAIAFVILFTIGGFSGLMLGITPVDFQYHDTYFVVAHFHYVLVTGAVYS 843
            LPFAFTLLLST FM GG PAGGWT+YPPLVLQTGDAFPFLIFA+H MG SSI GAIN++ T+ NMRAPGMT+MK+PLFVWTW+ITA+LLIA +PVLAG VTMLLTDKFFGT+FF AAGGGDPVMFQHIFWFFGHPEVYI+ILPAFGI S IIPTFARKPLFGY+SMVYA+A+IAFLSFIVWAHHMFTVGMPLAGELFFMY T+LIAVPTGVKVFNW +TMW+ SMTFE PMLFA+ FV++FTIGGFSGLML I PVDFQYHDTYFVVAHFHYVLVTGAV++
Sbjct:  120 LPFAFTLLLSTFFMEGGAPAGGWTIYPPLVLQTGDAFPFLIFAIHLMGISSIMGAINVVVTILNMRAPGMTMMKMPLFVWTWLITAYLLIAVMPVLAGAVTMLLTDKFFGTSFFTAAGGGDPVMFQHIFWFFGHPEVYIMILPAFGIVSQIIPTFARKPLFGYSSMVYATASIAFLSFIVWAHHMFTVGMPLAGELFFMYATMLIAVPTGVKVFNWVSTMWRGSMTFETPMLFALGFVVMFTIGGFSGLMLAIAPVDFQYHDTYFVVAHFHYVLVTGAVFA 400
[Close]
BLAST of mRNA_M-pyrifera_M_contig86577.20144.1 vs. uniprot
Match: W6MBF5_9GAMM (Cytochrome c oxidase subunit 1 n=2 Tax=Candidatus Competibacteraceae TaxID=1400857 RepID=W6MBF5_9GAMM)

HSP 1 Score: 497 bits (1279), Expect = 7.510e-173
Identity = 240/281 (85.41%), Postives = 262/281 (93.24%), Query Frame = 1 
Query:    1 LPFAFTLLLSTLFMPGGGPAGGWTMYPPLVLQTGDAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLMKLPLFVWTWIITAFLLIASIPVLAGGVTMLLTDKFFGTAFFAAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIASAIIPTFARKPLFGYASMVYASAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTILIAVPTGVKVFNWCATMWQSSMTFEVPMLFAIAFVILFTIGGFSGLMLGITPVDFQYHDTYFVVAHFHYVLVTGAVYS 843
            +PFAFTLLLSTLF+PGGGPAGGWT+YPPLVLQTGDAFPF+I AVH MGASSI GAINIIAT+ N+RAPGMTLMK+P+FVWTW+ITA+LLIA +PVLAG VTMLLTDKFFGT+FF A GGGDPVMFQHIFWFFGHPEVYI+ILPAFGI S IIPTFARKPLFGYASMVYA+A+IAFLSFIVWAHHMFTVGMPLAGELFFMY T+LIAVPTGVKVFNW +TMW+ +MTFE PMLFAIAFV+LFTIGGFSGLML + P DFQY DTYFVVAHFHYVLV GAV+S
Sbjct:  125 MPFAFTLLLSTLFLPGGGPAGGWTLYPPLVLQTGDAFPFVILAVHMMGASSIMGAINIIATILNLRAPGMTLMKMPMFVWTWLITAYLLIAVMPVLAGSVTMLLTDKFFGTSFFNAGGGGDPVMFQHIFWFFGHPEVYIMILPAFGIISMIIPTFARKPLFGYASMVYATASIAFLSFIVWAHHMFTVGMPLAGELFFMYATMLIAVPTGVKVFNWISTMWRGAMTFETPMLFAIAFVVLFTIGGFSGLMLAMAPADFQYQDTYFVVAHFHYVLVPGAVFS 405
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86577.20144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E2BAF9_9GAMM7.250e-18692.53Cytochrome c oxidase subunit 1 n=3 Tax=Gammaproteo... [more]
A0A1Z8WVA7_9GAMM3.700e-18189.68Cytochrome c oxidase subunit 1 n=1 Tax=Methylococc... [more]
A0A351MCL8_9GAMM1.330e-17787.90Cytochrome c oxidase subunit 1 n=1 Tax=Gammaproteo... [more]
A0A7C1H8R5_9GAMM6.300e-17586.12Cytochrome c oxidase subunit 1 n=1 Tax=Thioalkaliv... [more]
B6BV08_9PROT7.720e-17586.83Cytochrome c oxidase subunit 1 n=6 Tax=Bacteria Ta... [more]
A0A833MTX2_9GAMM1.740e-17485.41Cytochrome c oxidase subunit 1 n=1 Tax=Alkalilimni... [more]
A0A369CHJ4_9GAMM1.990e-17485.77Cytochrome c oxidase subunit 1 n=1 Tax=Thioalbus d... [more]
A0A1G0JMD3_9GAMM2.520e-17485.05Cytochrome c oxidase subunit 1 n=1 Tax=Gammaproteo... [more]
A0A426QK12_9GAMM2.220e-17384.70Cytochrome c oxidase subunit 1 n=5 Tax=Gammaproteo... [more]
W6MBF5_9GAMM7.510e-17385.41Cytochrome c oxidase subunit 1 n=2 Tax=Candidatus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86577contigM-pyrifera_M_contig86577:3..845 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score494.2
Seed ortholog evalue4e-137
Seed eggNOG ortholog314607.KB13_1134
Preferred namectaD
KEGG rclassRC00016
KEGG koko:K02274
KEGG TC3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6
KEGG ReactionR00081
KEGG Pathwayko00190,ko01100,map00190,map01100
KEGG ModuleM00155
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
EggNOG OGs1KQBN@119066,1MU7S@1224,2VHGU@28216,COG0843@1,COG0843@2
EC1.9.3.1
COG Functional cat.C
BiGG ReactioniJN746.PP_0104
Best tax levelunclassified Betaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size843
Cds size843
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816775.09526-CDS-M-pyrifera_M_contig86577:2..8451622816775.09526-CDS-M-pyrifera_M_contig86577:2..845Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86577 3..845 -
1692278171.0416033-CDS-M-pyrifera_M_contig86577:2..8451692278171.0416033-CDS-M-pyrifera_M_contig86577:2..845Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86577 3..845 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86577.20144.1prot_M-pyrifera_M_contig86577.20144.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86577 3..845 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86577.20144.1

>prot_M-pyrifera_M_contig86577.20144.1 ID=prot_M-pyrifera_M_contig86577.20144.1|Name=mRNA_M-pyrifera_M_contig86577.20144.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=281bp
LPFAFTLLLSTLFMPGGGPAGGWTMYPPLVLQTGDAFPFLIFAVHFMGAS
SIAGAINIIATVFNMRAPGMTLMKLPLFVWTWIITAFLLIASIPVLAGGV
TMLLTDKFFGTAFFAAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIASA
IIPTFARKPLFGYASMVYASAAIAFLSFIVWAHHMFTVGMPLAGELFFMY
TTILIAVPTGVKVFNWCATMWQSSMTFEVPMLFAIAFVILFTIGGFSGLM
LGITPVDFQYHDTYFVVAHFHYVLVTGAVYS
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mRNA from alignment at M-pyrifera_M_contig86577:3..845-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86577.20144.1 ID=mRNA_M-pyrifera_M_contig86577.20144.1|Name=mRNA_M-pyrifera_M_contig86577.20144.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=843bp|location=Sequence derived from alignment at M-pyrifera_M_contig86577:3..845- (Macrocystis pyrifera P11B4 male)
CTGCCGTTTGCCTTCACGTTGCTGCTGAGCACCTTGTTCATGCCCGGCGG
CGGCCCCGCAGGCGGCTGGACGATGTACCCGCCGCTCGTGCTGCAGACCG
GTGATGCGTTCCCGTTCCTGATTTTCGCGGTTCACTTCATGGGCGCCTCG
TCGATCGCCGGCGCGATCAACATCATCGCTACGGTGTTTAACATGCGCGC
ACCCGGCATGACCCTGATGAAACTGCCGCTGTTCGTGTGGACGTGGATCA
TCACGGCGTTCCTGCTGATCGCCTCGATTCCGGTACTCGCCGGTGGCGTG
ACGATGCTGTTGACCGACAAGTTCTTCGGCACCGCGTTTTTCGCCGCTGC
CGGTGGTGGCGACCCCGTCATGTTCCAGCATATCTTCTGGTTCTTCGGTC
ACCCGGAAGTCTATATTCTGATCCTGCCGGCGTTCGGGATTGCCTCGGCG
ATCATTCCGACGTTCGCGCGCAAACCCCTGTTCGGCTACGCCTCCATGGT
CTACGCGAGCGCCGCGATTGCGTTCCTGTCGTTCATCGTGTGGGCGCACC
ACATGTTCACTGTTGGCATGCCACTCGCCGGCGAACTGTTCTTCATGTAC
ACGACGATTCTCATCGCAGTGCCGACAGGAGTGAAGGTGTTCAACTGGTG
CGCGACAATGTGGCAAAGCTCGATGACATTCGAGGTGCCCATGCTGTTCG
CAATCGCATTTGTCATCCTGTTCACGATCGGCGGATTTTCGGGCCTCATG
CTCGGTATTACGCCGGTCGATTTCCAGTACCACGACACCTACTTCGTCGT
CGCCCACTTCCACTACGTACTCGTCACCGGGGCGGTGTATTCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86577:3..845-

>mRNA_M-pyrifera_M_contig86577.20144.1 ID=mRNA_M-pyrifera_M_contig86577.20144.1|Name=mRNA_M-pyrifera_M_contig86577.20144.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1686bp|location=Sequence derived from alignment at M-pyrifera_M_contig86577:3..845- (Macrocystis pyrifera P11B4 male)
CTGCCGTTTGCCTTCACGTTGCTGCTGAGCACCTTGTTCATGCCCGGCGG
CGGCCCCGCAGGCGGCTGGACGATGTACCCGCCGCTCGTGCTGCAGACCG
GTGATGCGTTCCCGTTCCTGATTTTCGCGGTTCACTTCATGGGCGCCTCG
TCGATCGCCGGCGCGATCAACATCATCGCTACGGTGTTTAACATGCGCGC
ACCCGGCATGACCCTGATGAAACTGCCGCTGTTCGTGTGGACGTGGATCA
TCACGGCGTTCCTGCTGATCGCCTCGATTCCGGTACTCGCCGGTGGCGTG
ACGATGCTGTTGACCGACAAGTTCTTCGGCACCGCGTTTTTCGCCGCTGC
CGGTGGTGGCGACCCCGTCATGTTCCAGCATATCTTCTGGTTCTTCGGTC
ACCCGGAAGTCTATATTCTGATCCTGCCGGCGTTCGGGATTGCCTCGGCG
ATCATTCCGACGTTCGCGCGCAAACCCCTGTTCGGCTACGCCTCCATGGT
CTACGCGAGCGCCGCGATTGCGTTCCTGTCGTTCATCGTGTGGGCGCACC
ACATGTTCACTGTTGGCATGCCACTCGCCGGCGAACTGTTCTTCATGTAC
ACGACGATTCTCATCGCAGTGCCGACAGGAGTGAAGGTGTTCAACTGGTG
CGCGACAATGTGGCAAAGCTCGATGACATTCGAGGTGCCCATGCTGTTCG
CAATCGCATTTGTCATCCTGTTCACGATCGGCGGATTTTCGGGCCTCATG
CTCGGTATTACGCCGGTCGATTTCCAGTACCACGACACCTACTTCGTCGT
CGCCCACTTCCACTACGTACTCGTCACCGGGGCGGTGTATTCGCTGCCGT
TTGCCTTCACGTTGCTGCTGAGCACCTTGTTCATGCCCGGCGGCGGCCCC
GCAGGCGGCTGGACGATGTACCCGCCGCTCGTGCTGCAGACCGGTGATGC
GTTCCCGTTCCTGATTTTCGCGGTTCACTTCATGGGCGCCTCGTCGATCG
CCGGCGCGATCAACATCATCGCTACGGTGTTTAACATGCGCGCACCCGGC
ATGACCCTGATGAAACTGCCGCTGTTCGTGTGGACGTGGATCATCACGGC
GTTCCTGCTGATCGCCTCGATTCCGGTACTCGCCGGTGGCGTGACGATGC
TGTTGACCGACAAGTTCTTCGGCACCGCGTTTTTCGCCGCTGCCGGTGGT
GGCGACCCCGTCATGTTCCAGCATATCTTCTGGTTCTTCGGTCACCCGGA
AGTCTATATTCTGATCCTGCCGGCGTTCGGGATTGCCTCGGCGATCATTC
CGACGTTCGCGCGCAAACCCCTGTTCGGCTACGCCTCCATGGTCTACGCG
AGCGCCGCGATTGCGTTCCTGTCGTTCATCGTGTGGGCGCACCACATGTT
CACTGTTGGCATGCCACTCGCCGGCGAACTGTTCTTCATGTACACGACGA
TTCTCATCGCAGTGCCGACAGGAGTGAAGGTGTTCAACTGGTGCGCGACA
ATGTGGCAAAGCTCGATGACATTCGAGGTGCCCATGCTGTTCGCAATCGC
ATTTGTCATCCTGTTCACGATCGGCGGATTTTCGGGCCTCATGCTCGGTA
TTACGCCGGTCGATTTCCAGTACCACGACACCTACTTCGTCGTCGCCCAC
TTCCACTACGTACTCGTCACCGGGGCGGTGTATTCG
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