mRNA_M-pyrifera_M_contig8656.20141.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8656.20141.1
Unique NamemRNA_M-pyrifera_M_contig8656.20141.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig8656.20141.1 vs. uniprot
Match: D8LTD0_ECTSI (IPT/TIG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD0_ECTSI)

HSP 1 Score: 950 bits (2455), Expect = 0.000e+0
Identity = 554/1020 (54.31%), Postives = 657/1020 (64.41%), Query Frame = 1
Query:    7 SAEVFCWGELTPAPGKESPGPVEVGRGSL-VRRVYAGVGSAVLAGTESVKWTRTNDGXXXXXXXXXDGNHEDSWGLPGVECVALAQDHTLLLRRVVSGDGDGRDDDVGGVT--QVLVWGSGRQGQLGLGSRTLESKTPTPIPALSAYRVVQVACGAHHSAAVTSHGDLFTWGRGIEGQLGHSSPHLPTELNEAITGVQFRPKPVPAFLATKKRCRPVAGVSCGHNFTVVVTRAGEVWAFGEGSAGQIGVGRISKAPVPTIVMTACPATGEPFVEVAAGWAHALARTKGGGVFSWGFNAMGSLGLGDYRTRFLPEAVTLRG--DRLEGSGPRDLCGGPSGSXXXXXXXXXESSKISDRKKGGIAIKINACGHCSGVLTTEGELLTWGCHNAGRLGYSYGGVGD--RPEGMEYVPRPRRVDRLAGAELTDFALSGRGGVALIPLRVKSIHPASGPLETGCKVVIHGCGFWDSPDIVVKFTPVARGARPVAARSAVGTYVARCTDYGGIERVTCVAPCFAFPEEVNVEVSVDGVSFTTDGIKFQYYRKPEMVQITPNTCRPPFPRLRLDGAHITPCE--TLLVRFVEEGGERLGA-------DGDVELKATQDSDRSDSTLSPGPASRILTVAGRTESETIEVDIDPDTDLPILETRWFVTCDSPSLPPPPQAKLPFISQVTVAPNGTTFEGEPLRFVAHDPHADTCLPTAVPVADTNTVPAXXXXXXXXXXXXXXXXXT---AATGELISITGRNLYRGAGLAVRLRF--DDXXXXXXXXXXXXXSAIPLHAVAFDDATETVTGRLPAAAASLLTGSTGTAV---KDPARSPALGVVVEVTVDGKEFFTVPERLTLYRHPSLTLKGDGLYPVAGGGWAELAVAGSTFRGHEAKARLWRPIFFCDGVDVTLPLLSSRPPGEIEAAAGQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKENGRKGREVPVSRDSFFFAVPPLPK 2994
            SAEVFCWG L P PG+E+P PVE GR  L   RV AG G A+L G +S  W    DG           + ED W +PG+EC A  Q+HTLLL +V +       DD G  T  +VL WGSG QGQLG+G+ TLES+ P  IPALSAYRV+QVACGA HSAAVTS+GDLFTWGRG EGQLGH+S HLP ELN+AITGVQ RPKPVPAFLATKKR RPVAGVSCG NFT+VVTRAGE WAFG G+ GQ+G+GR++   VP +VM +CPATGEPFVEVAAGW+HALART GG + SWGFNA+G+LGLGD+RTRFLPEAV L G   +              GS         ++++I+       A+K++ACG+CSG L+ +GEL TWGC  AG LG+   G G   RPE +E+V RPRRV+RL GA++TDFALS +GGVAL+P RV SI PASGP+E+GCKVVI G GFWDS DIVVKFTPV++G +P A+RSAVGTY+ R T  GG+E VTC APCFA PE   VEVSVDG SFT+D  +FQYYR PE+ Q+TP+TCRPPFPRLR+DG H+ P E  TLLVRF E               D    L     +D + S LS   A R+  V GR ESE IEV  DPDT+LPI E RWF+ C SP LPP  +AKLPF+S+VTVAPNG  F+GE LRF+AHDPHAD CLP+AVP A    +PAXXXXXXXXXXXXXX   +    A G  + ITGRNLYRGA +AVRLRF  DD             S +P H V+FD ++E++ G +P  A  L+ G+ G      +   R PA+ VVVEV+VDG EFF VPERLTLYR P L L GDGLYP A GG AEL     +FRG++AK RL   +    G+DVTLPLLSS P  E+E  AG+                                                                    S  +  + REVP S +SFFFAVPPLPK
Sbjct:    4 SAEVFCWGSLNPVPGEENPTPVEAGRRGLEAARVCAGSGRALLIGAKSATWLSGQDG-----------SGEDPWDVPGIECAAFGQNHTLLLHKVAATTEGDCADDAGSETKTEVLAWGSGGQGQLGIGTITLESELPKTIPALSAYRVLQVACGAQHSAAVTSYGDLFTWGRGTEGQLGHASRHLPPELNDAITGVQLRPKPVPAFLATKKRQRPVAGVSCGANFTLVVTRAGEAWAFGGGAMGQLGIGRVTSVGVPKMVMPSCPATGEPFVEVAAGWSHALARTSGGRILSWGFNALGALGLGDHRTRFLPEAVPLDGWQKQXXXXXXXXXXXXXCGSNPLNNPPAAKTARIT-------AVKVHACGNCSGALSADGELFTWGCGRAGGLGHRGEGEGQYGRPERVEHVLRPRRVERLVGAQVTDFALSNKGGVALVPPRVASIEPASGPMESGCKVVIKGYGFWDSKDIVVKFTPVSKGHKPSASRSAVGTYMPRETGQGGVEFVTCTAPCFASPEAAYVEVSVDGTSFTSDCTRFQYYRTPELTQVTPDTCRPPFPRLRVDGEHLRPNENETLLVRFEEXXXXXXXXXXXXXXXDEAAPLLEGTGNDTTRSALSRSTARRVFVVPGRVESEVIEVGTDPDTELPIHEERWFLACGSPPLPP--EAKLPFVSRVTVAPNGADFDGESLRFIAHDPHADVCLPSAVP-APAPPLPAXXXXXXXXXXXXXXDKSSDGGEARGPCVHITGRNLYRGANVAVRLRFGRDDE------------SVVPFHTVSFDVSSESIVGVVPIDAGGLVAGAPGAPPXXKEAQQRPPAVSVVVEVSVDGVEFFAVPERLTLYRGPQLALHGDGLYPAAEGGLAELKTTAPSFRGNQAKVRLVSDVH---GIDVTLPLLSSPPAEEVEEGAGE-----------ASGVPGREAGGATPAPGQPSPAAGENEGKSTPVQEPAKDAAVQGEEQQSGEVASTEASDNSVWEEREVPTSEESFFFAVPPLPK 976          
BLAST of mRNA_M-pyrifera_M_contig8656.20141.1 vs. uniprot
Match: A0A485KGH3_9STRA (Aste57867_4891 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGH3_9STRA)

HSP 1 Score: 233 bits (593), Expect = 6.780e-60
Identity = 151/427 (35.36%), Postives = 207/427 (48.48%), Query Frame = 1
Query:  340 VLVWGSGRQGQLGLGSRTLESKTPTPIPALSAYRVVQVACGAHHSAAVTSHGDLFTWGRGIEGQLGHSSPHLPTELNEAITGVQFRPKPVPAFLATKKRCRPVAGVSCGHNFTVVVTRAGEVWAFGEGSAGQIGVGRISKAPVPTIVMTACPATGEPFVEVAAGWAHALARTKGGGVFSWGFNAMGSLGLGDYRTRFLPEAVTLRGDRLEGSGPRDLCGGPSGSXXXXXXXXXESSKISDRKKGGIAIKINACGHCSGVLTTEGELLTWG--CHNAGRLGYSYGGVGDRPEGMEYVPRPRRVDRLAGAELTDFALSGRGGVALIPLRVKSIHPASGPLETGCKVVIHGCGFWDSPDIVVKFTPVARGARPVAARSAVGTYVARCTDYGGIERVTCVAPCFAFPEEVNVEVSVDGVSFTTDGIKFQYY 1614
            + VWG    GQLGLG +   +  P  +          VACG +H+AAV+  GDL+TWGR  EGQLGHS+     + NE + GV   PK V +FL   K+C+ VA   CG  FT V+T  GE++ FGEG AGQ+G GR +K  VP++ +  C    E FVE+A GWAH L  T  G +++WGFN  G LGLGD  TRF P+ +                               E   ++          + A G+ S  +   G LLTWG  CH           +  +P    +V  P  V+ L    +   A +    +   P  V  I P SG LE G K+ I+G GFW+S D+ V+F P+  G  P A  +A            GI  V+C AP F+   +  VEV+++G  FT++G  F+ Y
Sbjct:   91 IFVWGDAAYGQLGLGGKVTSAAHPIRLRHSKNVSFSSVACGGYHTAAVSEFGDLYTWGRNFEGQLGHSTKVASLQSNETLNGVFHHPKHVASFL--NKKCKQVA---CGDKFTAVLTVHGEIYTFGEGQAGQLGRGRCTKEFVPSLTLK-CDDPSEEFVEIACGWAHTLTVTNTGRLYAWGFNLYGQLGLGDTNTRFFPQEI-------------------------------ECIPLTH---------VYAGGNYSAAIC-RGRLLTWGNGCHCK---------LAQKPRDESHVLTPTIVNVLNDTYVQSVACAWDNMLVFAPTWVSLIKPTSGSLEGGTKISIYGSGFWESDDLTVRFVPLTEGRLPRAVLAAYDPA-------SGI--VSCEAPKFSVAGDFAVEVAMNGKHFTSNGYVFEVY 452          
BLAST of mRNA_M-pyrifera_M_contig8656.20141.1 vs. uniprot
Match: A0A024TG72_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TG72_9STRA)

HSP 1 Score: 230 bits (586), Expect = 4.480e-59
Identity = 151/434 (34.79%), Postives = 202/434 (46.54%), Query Frame = 1
Query:  340 VLVWGSGRQGQLGLGSRTLESKTPTPIPALSAYRVVQVACGAHHSAAVTSHGDLFTWGRGIEGQLGHSSPHLPTELNEAITGVQFRPKPVPAFLATKKRCRPVAGVSCGHNFTVVVTRAGEVWAFGEGSAGQIGVGRISKAPVPTIVMTACPATGEPFVEVAAGWAHALARTKGGGVFSWGFNAMGSLGLGDYRTRFLPEAVTLRGDRLEGSGPRDLCGGPSGSXXXXXXXXXESSKISDRKKGGIAIKINACGHCSGVLTTEGELLTWGCHNAGRLGYSYGGVGDRPEGMEYVPRPRRVDRLAGAELTDFALSGRGGVALIPLRVKSIHPASGPLETGCKVVIHGCGFWDSPDIVVKFTPVARGARPVAARSAVGTYVARCTDYGGIERVTCVAPCFAFPEEVNVEVSVDGVSFTTDGIKFQYYRKPEMVQIT 1641
            V VWG GR GQLGLG   +  + P  I  L       +ACG  H+AA++  GDL+TWGR  EGQLGH+S      +NE + GV  RPK V   L   K+C+ VA   CG  FTV +T  G+++AFGEG AGQ+G GR +K   PT+ +T+  +  +PFVE+A GWAH LA T+ G +FSWGFN  G LG  D +TRF PE V                                   ++    GG                          H   +L              + V  P  V  L    +   A S    V   P  V  +HP  G L  GC + + G GFW+S D+ V+F P+  G  P AA       +A      G+  V+CV P F+   E  VEV+++G  FTT+G +F+ Y  P +  I+
Sbjct:   91 VFVWGDGRFGQLGLGGTIVAKEHPVKIGQLDHLTFKSIACGGFHTAALSESGDLYTWGRNFEGQLGHTSASASCAVNEKLNGVFHRPKHVAPLL--NKKCKQVA---CGDKFTVALTVHGDIYAFGEGQAGQLGTGRCTKVLQPTLALTS-ESPDDPFVEIACGWAHTLAMTQTGRLFSWGFNQYGQLGASDTKTRFTPEQVVA------------------------------CVPVAHVFAGGXXXXXXXXXXXXXXXXXXXXXXX--AHGTAKL--------------DAVLAPTLVQDLKDVYVQAVACSWDNLVVFAPTWVSGLHPQCGVLSGGCMLRVFGSGFWESDDLTVRFVPLTEGRLPRAA-------LASFDPATGV--VSCVLPKFSVAGEFAVEVAMNGKHFTTNGHRFEVYIAPTIAHIS 463          
BLAST of mRNA_M-pyrifera_M_contig8656.20141.1 vs. uniprot
Match: A0A6G0WB17_9STRA (IPT/TIG domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WB17_9STRA)

HSP 1 Score: 229 bits (585), Expect = 6.200e-59
Identity = 149/437 (34.10%), Postives = 213/437 (48.74%), Query Frame = 1
Query:  337 QVLVWGSGRQGQLGLGSRTLESKTPTPIPALSAYRVVQVACGAHHSAAVTSHGDLFTWGRGIEGQLGHSSPHLPTELNEAITGVQFRPKPVPAFLATKKRCRPVAGVSCGHNFTVVVTRAGEVWAFGEGSAGQIGVGRISKAPVPTIVMTACPATGEPFVEVAAGWAHALARTKGGGVFSWGFNAMGSLGLGDYRTRFLPEAVTLRGDRLEGSGPRDLCGGPSGSXXXXXXXXXESSKISDRKKGGIAIKINACGHCSGVLTTEGELLTWGCHNAGRLGYSYGGVGDRPEGMEYVPRPRRVDRLAGAELTDFALSGRGGVALIPLRVKSIHPASGPLETGCKVVIHGCGFWDSPDIVVKFTPVARGARPVAARSAVGTYVARCTDYGGIERVTCVAPCFAFPEEVNVEVSVDGVSFTTDGIKFQYYRKPEMVQITPN 1647
            Q+ VWG G  GQLG+G+    S  P  +   +      VACG +H+AA+++ GDL+TWGR  EGQLGHSS        E   GV   PK V AFL TK  C  VA   CG +FT V++R G+++AFGEG +GQ+G+GR +K+ +P   + +  AT +PFVE+A GWAHALA +K G +F+WGFN  G LGLGD  +RFLPE +              +C                               + A G+ S                       +          ++V +P+ VD +    +   A S    +A  P  +  + P  GPLE G ++ I G GFW+S D+ V+F P+  G  P   R+ + T+  +     GI  +TC  P F+ P    VEV+++G  FT +  +F+ Y  P    I+ N
Sbjct:   90 QIFVWGDGEFGQLGMGATVSSSDRPLKLRQSNHLTFTSVACGGYHTAAISNGGDLYTWGRNFEGQLGHSSQAAQFGECEVQNGVFHHPKHVSAFLNTK--CHQVA---CGEHFTAVLSRQGDIYAFGEGQSGQLGIGRCTKSFIPRKTLPSIDAT-DPFVEIACGWAHALAVSKSGRLFAWGFNQYGQLGLGDTTSRFLPEEILSC---------HQIC------------------------------HVYASGNYSAXXXXXXXXXXXXXXXXXXXXXXH---------EQHVLQPKVVDSVKNLYVQSAACSWDNMLAFAPTWISDVQPKCGPLEGGIQLSIFGSGFWESDDLTVRFVPLTEGRLP---RAVLATFNVQ----SGI--ITCELPKFSVPGIFAVEVAMNGKHFTMNNHEFEVYVPPTCTFISHN 463          
BLAST of mRNA_M-pyrifera_M_contig8656.20141.1 vs. uniprot
Match: A0A418B883_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B883_9STRA)

HSP 1 Score: 220 bits (561), Expect = 8.460e-57
Identity = 155/450 (34.44%), Postives = 212/450 (47.11%), Query Frame = 1
Query:  340 VLVWGSGRQGQLGLGSRTLESKTPTPIPALSAYRVVQVACGAHHSAAVTSHGDLFTWGRGIEGQLGHSSPHLPTELNEAITGVQFRPKPVPAFLATKKRCRPVAGVSCGHNFTVVVTRAGEVWAFGEGSAGQIGVGRISKAPVPTIVMTACPATGEPFVEVAAGWAHALARTKGGGVFSWGFNAMGSLGLGDYRTRFLPEAVTLRGDRLEGSGPRDLCGGPSGSXXXXXXXXXESSKISDRKKGGIAIKINACGHCSGVLTTEGELLTWGCHNAGRLGYSYGGVGDRPEGMEYVPRPRRVDRLAGAELTDFALSGRGGVALIPLRVKSI----------------HPASGPLETGCKVVIHGCGFWDSPDIVVKFTPVARGARPVAARSAVGTYVARCTDYGGIERVTCVAPCFAFPEEVNVEVSVDGVSFTTDGIKFQYYRKPEMVQIT 1641
            V VWG GR GQLGLG   +  + P             +ACG  H+AA++  GDL+TWGR  EGQLGHSS      +NE + GV  RPK V   L   K+C+ VA   CG  FTV +   G+++AFGEG AGQ+G GR +K   PT+ +T+  +  +PFVE+A GWAH LA T+ G +FSWGFN  G LG  D +TRF PE V              +  G + S          S+ + D                  V+   G L+TWG    G+L +           ++ V  P  V  L    +   A S    V   P  V+S+                HP  G L  GC + + G GFW+S D+ V+F P+  G  P   R+A+ T+          +  T V   FA      VEV+++G  FTT+G +F+ Y  P +  I+
Sbjct:   52 VFVWGDGRFGQLGLGGTIVAKEHP-------------IACGGFHTAALSESGDLYTWGRNFEGQLGHSSASASCAVNEKLNGVFHRPKHVAPLL--NKKCKQVA---CGDKFTVALIVHGDIYAFGEGQAGQLGTGRCTKVLQPTLALTS-ESPDDPFVEIACGWAHTLAMTQTGRLFSWGFNQYGQLGASDTKTRFTPEQVVACVPVAH------VFAGGNYSAAISSTRASPSNVVVDH-----------------VVVGSGRLMTWGNAMHGKLAHG-------TAKLDAVLAPTLVQDLKDVYVQAVACSWDNLVVFAPTWVRSLLHVVGFSLEFAQVSGLHPQCGVLSGGCMLRVFGSGFWESDDLTVRFVPLTEGRLP---RAALATF----------DPATGV---FA------VEVAMNGKHFTTNGHRFEVYIAPTIAHIS 430          
BLAST of mRNA_M-pyrifera_M_contig8656.20141.1 vs. uniprot
Match: A0A1V9Z9H8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9H8_9STRA)

HSP 1 Score: 218 bits (556), Expect = 1.490e-55
Identity = 146/432 (33.80%), Postives = 207/432 (47.92%), Query Frame = 1
Query:  349 WGSGRQGQLGLGSRTLESKTPTPIPALSAYRVVQVACGAHHSAAVTSHGDLFTWGRGIEGQLGHSSPHLPTELNEAITGVQFRPKPVPAFLATKKRCRPVAGVSCGHNFTVVVTRAGEVWAFGEGSAGQIGVGRISKAPVPTIVMTACPATGEPFVEVAAGWAHALARTKGGGVFSWGFNAMGSLGLGDYRTRFLPEAVTLRGDRLEGSGPRDLCGGPSGSXXXXXXXXXESSKISDRKKGGIAIK-INACGHCSGVLTTEGELLTWGCHNAGRLGYSYGGVGDRPEGMEYVPRPRRVDRLAGAELTDFALSGRGGVALIPLRVKSIHPASGPLETGCKVVIHGCGFWDSPDIVVKFTPVARGARPVAARSAVGTYVARCTDYGGIERVTCVAPCFAFPEEVNVEVSVDGVSFTTDGIKFQYYRKPEMVQIT 1641
            WGSG  GQLGLG   L +K P  +  L       +ACG +HSAAVT+ G L+TWGR +EGQLGH+SP L T  NE   GV   PK V  FL  KKRC+ +A   CG  F+V++T +G+V+A GEG  GQ+G GR +K  +P + +      G  FV+VA GWAHALA T  G +F+WGFN  G LGL D ++RF PE +                                          G+  K + A G+                       + +           +V RP  V  +    +   A +    +   P  V  I P SG ++ G ++ I G GFWDS ++ V+F P+  G  P   R+++G+Y        G+  ++C  P F  P +  VEV+++G  FTT+GI F+ +  P    ++
Sbjct:   95 WGSGEFGQLGLGGAILTAKAPRKLRELPCASFASIACGGYHSAAVTTTGALYTWGRNMEGQLGHASPLLSTAENEVKNGVFHHPKHVDDFL--KKRCKQIA---CGDKFSVMLTDSGDVYACGEGQTGQLGQGRCTKQFLPMVTLLGDKTDG--FVQVACGWAHALALTASGRLFAWGFNQYGQLGLDDTKSRFFPEEIP-----------------------------------------GLLFKHVYAGGNYXXXXXXXXXXXXXXXXXXXXXXHGH---------ENHVHRPLVVQAVQDTYVQSIACATSHMLFFAPSWVAQIVPTSGAVQGGTRLRIFGSGFWDSDELTVRFVPLTEGRLP---RASLGSYDVTT----GV--ISCEVPKFGVPGDFAVEVAMNGKHFTTNGIVFEVFVPPVFTHMS 460          
BLAST of mRNA_M-pyrifera_M_contig8656.20141.1 vs. uniprot
Match: T0QRN5_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QRN5_SAPDV)

HSP 1 Score: 217 bits (553), Expect = 8.680e-55
Identity = 147/435 (33.79%), Postives = 205/435 (47.13%), Query Frame = 1
Query:  340 VLVWGSGRQGQLGLGSRTLESKTPTPIPALSAYRVVQVACGAHHSAAVTSHGDLFTWGRGIEGQLGHSSPHLPTELNEAITGVQFRPKPVPAFLATKKRCRPVAGVSCGHNFTVVVTRAGEVWAFGEGSAGQIGVGRISKAPVPTIVMTACPATGEPFVEVAAGWAHALARTKGGGVFSWGFNAMGSLGLGDYRTRFLPEAVTLRGDRLEGSGPRDLCGGPSGSXXXXXXXXXESSKISDRKKGGIAIK-INACGHCSGVLTTEGELLTWGCHNAGRLGYSYGGVGDRPEGMEYVPRPRRVDRLAGAELTDFALSGRGGVALIPLRVKSIHPASGPLETGCKVVIHGCGFWDSPDIVVKFTPVARGARPVAARSAVGTYVARCTDYGGIERVTCVAPCFAFPEEVNVEVSVDGVSFTTDGIKFQYYRKPEMVQIT 1641
            +  WG G  GQLGLG     +KTP  +  L       VACG  HSAAVTS G L+TWGR +EGQLGH+S  L T  NE   GV F PK V AFL  KKRC+ +A   CG   +V++T AG+V+A GEG  GQ+G GR +K  +P  ++T      +PFV+VA GWAHALA T  G +F+WGFN  G LGL D ++RF+PE +                                          G+  K + A G                        + +          + V RP  VD +    +   A + R  +   P  V+ I P  G +  G ++ I G GFW + D+ V+F P+  G     AR+A+  Y        G   + C  P F  P +  VEV+++G  FT++G+ F+ +  P +  ++
Sbjct:   92 LYAWGVGESGQLGLGGAITSTKTPRKLRELPGVAFTSVACGGFHSAAVTSTGALYTWGRNLEGQLGHASSLLSTSENETQNGVFFHPKHVDAFL--KKRCKQIA---CGDKLSVILTDAGDVYACGEGQVGQLGQGRCTKQFLP--LLTLLGEKTDPFVQVACGWAHALALTSSGRLFAWGFNQYGQLGLDDTKSRFVPEELP-----------------------------------------GLLFKHVYAGGXXXXXXXXXXXXXXXXXXXXXXXXHGHD---------DNVCRPLVVDAVQDTYVQAVACAARHMIFFAPSWVEHIQPTCGAMSGGTQLRIFGSGFWATDDLTVRFVPLTDGR---LARAALAAY----DPVTGT--IACEVPRFGVPGDFAVEVAMNGKHFTSNGVLFEVFAPPTVTFVS 460          
BLAST of mRNA_M-pyrifera_M_contig8656.20141.1 vs. uniprot
Match: A0A8J2SN98_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SN98_9STRA)

HSP 1 Score: 211 bits (536), Expect = 1.690e-52
Identity = 174/531 (32.77%), Postives = 238/531 (44.82%), Query Frame = 1
Query:  229 LPGVECVALAQDHTLLLRRVVSGDGDGRDDDVGGVTQVLVWGSGRQGQLGLGS-RTLE--SKTPTPIPALSAYRVVQVACGAHHSAAVTSHGDLFTWGRGIEGQLGH----------SSPHLPTELNEAITGVQFRPKPVPAFLATKKRCRPVAGVSCGHNFTVVVTRAGEVWAFGEGSAGQIGVG-RISKAPVPTIVMTACPATGEPFVEVAAGWAHALARTKGGGVFSWGFNAMGSLGLGDYRTRFLPEAVTLRGDRLEGSGPRDLCGGPSGSXXXXXXXXXESSKISDRK----KGGIAIKINACGHCSGVLTTEGELLTWGCHNAGRLGYSYGGVGDRPEGMEYVPRPRRVDRLAGAELTDFALSGRGGVALIPLRVKSIHPASGPLETGCKVVIHGCGFWDSPDIVVKFTPVARG--ARPVAARSAVGTYVARCTDYG-----GIERVTCVAPCFAFPEEVNVEVSVDGVSFTTDGIKFQYYRKPEMVQITPNTCRPPFPR-LRLDGAHITPCETLLVRFVEEGGE 1743
            L  ++CV+  + H+L +            DD G    +   GSG  GQLGLG+ + +E  SK+   +  LS +RV+ ++CG+ HS AVT  GD++TWGRG EGQ GH          S PH           +Q  PK V   +   ++  P    +CG NFT+++TR G  WA+GEG  G++GVG RI+K P P  V     A+   FV    GWAH LA      +FSWGFN  G LGLG                         LC     S          +  IS R+     G +A    A    + V   +G L TWG   A RLG+      ++    E+V  PR V  L    ++   L+  GG A +P  V    PAS P   G KV++ G GFW S   VV+FTP+  G  A     RS++G YV   T  G     G   + C  P F     V  EV+++G  FTT  +  + Y  P +  I P  C       + + G  +     + VRF E GG+
Sbjct:  115 LAHIKCVSFGETHSLAV------------DDKG---SIWTQGSGGSGQLGLGATKRVEDASKSWVEVSFLSQHRVISLSCGSRHSVAVTLTGDVYTWGRGCEGQTGHRFTDDNHCNKSDPHAQR------AEIQLLPKLV---VIPSQQHEPAKFTACGPNFTIILTRRGVPWAWGEGRCGELGVGLRIAKQPTPARVCWPDDASKCEFVT--CGWAHVLAFDSNCKLFSWGFNRFGQLGLG-------------------------LCVSGQNSKSVI-----STYTISPRRVVHFPGSVAFANAAANSSAAVRAEDGMLFTWGSGEARRLGHFL----EKGLNTEHVHCPRSVPGLRERYVSSATLTETGGFAFVPSSVNYAEPASVPTIGGTKVLLWGGGFWKSSGCVVRFTPLDEGTLALETRPRSSIGKYV---TPKGARIGAGKTGILCRMPRFTTTRFVFAEVAMNGKDFTTSRVCIRLYDNPTLAAIKPVCCSSTDAHDVIIIGKSLLETNEIKVRFKELGGQ 582          
BLAST of mRNA_M-pyrifera_M_contig8656.20141.1 vs. uniprot
Match: A0A836CBA4_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBA4_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.950e-51
Identity = 116/308 (37.66%), Postives = 157/308 (50.97%), Query Frame = 1
Query:  340 VLVWGSGRQGQLGLGSRTLESKTPTPIPALSAYRVVQVACGAHHSAAVTSHGDLFTWGRGIEGQLGHSSPHLPTELNEAI---TGVQFRPKPVPAFLATKKRCRPVAGVSCGHNFTVVVTRAGEVWAFGEGSAGQIGVGRISKAPVPTIVMTACPATGEPFVEVAAGWAHALARTKGGGVFSWGFNAMGSLGLGDYRTRFLPEAVTLRGDRLEGSGPRDLCGGPSGSXXXXXXXXXESSKISDRKKGGIAIKINACGHCSGVLTTEGELLTWGCHNAGRLGYSYGGVGDRPEGMEYVPRPRRVDRLAG 1254
            VL WG GR+GQLG G       TP  IP L+  +V  V+CG+ HSAAVT  G+++TWGRG EGQLGH S    T+ ++      GVQ  P+ V  FL  KK     A ++CG+NFT+V+ + GEVWAFGEG  GQ+G GR +++  P + + A P TG   V VAAGWAHALA ++ G V++WG N +G LG+GD + R  P                                   S+++++         I+A G  S  LT  G +  WG  ++G    S        +    V  P  V  LAG
Sbjct:    1 VLAWGEGREGQLGSGKAHARWDTPRVIPGLAGKQVASVSCGSAHSAAVTCSGEVYTWGRGFEGQLGHGSSK--TQQDDPACQANGVQLTPRLVTHFLPAKKPKIAAAAIACGNNFTLVLGKGGEVWAFGEGGCGQLGSGRRTQSARPLLALAASPETGGAMVAVAAGWAHALALSERGQVYAWGLNHVGQLGVGDTKARHTPTRTVFSA----------------------------SAEVAE---------IHALGGRSCALTRGGNVYAWGAVSSGGSSSSSSNAHPATDVTAAVTTPHLVQALAG 269          
BLAST of mRNA_M-pyrifera_M_contig8656.20141.1 vs. uniprot
Match: A0A1V9YP54_9STRA (IPT/TIG domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YP54_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.610e-49
Identity = 143/459 (31.15%), Postives = 205/459 (44.66%), Query Frame = 1
Query:  247 VALAQDHTLLLRRVVSGDGDGRDDDVGGVTQVLVWGSGRQGQLGLGSRTLESKTPTPIPALSAYRVVQVACGAHHSAAVTSHGDLFTWGRGIEGQLGHSSPHLPTELNEAITGVQFRPKPVPAFLATKKRCRPVAGVSCGHNFTVVVTRAGEVWAFGEGSAGQIGVGRISKAPVPTIVMTACPATGEPFVEVAAGWAHALARTKGGGVFSWGFNAMGSLGLGDYRTRFLPEAVTLRGDRLEGSGPRDLCGGPSGSXXXXXXXXXESSKISDRKKGGIAIKINACGHCSGVLTTEGELLTWGCHNAGRLGYSYGGVGDRPEGMEYVPRPRRVDRLAGAELTDFALSGRGGVALIPLRVKSIHPASGPLETGCKVVIHGCGFWDSPDIVVKFTPVARGARPVAARSAVGTYVARCTDYGGIERVTCVAPCFAFPEEVNVEVSVDGVSFTTDGIKFQYYRKP 1623
            +A  ++HT+ L    S DG            +  WG G+ GQLGLG    ++K P  I  +       +A G +HSAA+T  G L+ WGR  EGQLGH+   +  E NEA  GV   PK V  FL  KK C+ +A   CG  F++++T  GEV+A GEG  GQ+G GR +K   P + + A     + FV+VA GWAHALA T  G +F+WGFN  G LG+ D +TRF PE +                                          G+  K                                       +  E + RP+ V  +    +   A +    +   P  V+ I P SG    G ++ I G GFW++PD+ V+F P+  G      R A  T +A+     GI  ++C  P F+ P +  VEV+++G  FTT+G+ F+ +  P
Sbjct:   70 LAFGRNHTIAL----SLDG-----------HLFAWGDGQYGQLGLGGNVNQAKNPQKIREIPQAHFTSIASGGYHSAAITDSGSLYMWGRNFEGQLGHAMHCMTREQNEAKYGVVHHPKHVDDFL--KKLCKQIA---CGDKFSIILTENGEVYACGEGQMGQLGQGRCTKLMHPMLTLLA--EKHDLFVQVACGWAHALALTGSGRLFAWGFNHYGQLGVDDTKTRFFPEEIP-----------------------------------------GLLFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH--------QNHENIYRPKVVQAVQDTYIRSIACASDHMLFFAPSWVEQIIPTSGSFHGGTELKIFGSGFWNTPDLTVRFVPLTEG------RLARAT-LAKFDPTTGI--ISCEVPRFSVPGDFAVEVAINGKHFTTNGVTFEVFVPP 448          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8656.20141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTD0_ECTSI0.000e+054.31IPT/TIG domain-containing protein n=2 Tax=Ectocarp... [more]
A0A485KGH3_9STRA6.780e-6035.36Aste57867_4891 protein n=1 Tax=Aphanomyces stellat... [more]
A0A024TG72_9STRA4.480e-5934.79Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6G0WB17_9STRA6.200e-5934.10IPT/TIG domain-containing protein n=1 Tax=Aphanomy... [more]
A0A418B883_9STRA8.460e-5734.44Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A1V9Z9H8_9STRA1.490e-5533.80Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
T0QRN5_SAPDV8.680e-5533.79Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A8J2SN98_9STRA1.690e-5232.77Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A836CBA4_9STRA1.950e-5137.66Regulator of chromosome condensation 1/beta-lactam... [more]
A0A1V9YP54_9STRA1.610e-4931.15IPT/TIG domain-containing protein n=1 Tax=Thrausto... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8656contigM-pyrifera_M_contig8656:4329..9362 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score961.1
Seed ortholog evalue4.1e-277
Seed eggNOG ortholog2880.D8LTD0
KEGG koko:K10614,ko:K10615
KEGG Pathwayko04120,map04120
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquitin-protein transferase activity
EggNOG OGsCOG5021@1,KOG0941@2759
Ec32 ortholog descriptionRegulator of chromosome condensation, RCC1
Ec32 orthologEc-12_006100.1
EC2.3.2.26
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Exons7
Model size2994
Cds size2994
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816774.9106317-CDS-M-pyrifera_M_contig8656:4328..46851622816774.9106317-CDS-M-pyrifera_M_contig8656:4328..4685Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8656 4329..4685 -
1692278170.929571-CDS-M-pyrifera_M_contig8656:4328..46851692278170.929571-CDS-M-pyrifera_M_contig8656:4328..4685Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8656 4329..4685 -
1622816774.9259076-CDS-M-pyrifera_M_contig8656:5382..57591622816774.9259076-CDS-M-pyrifera_M_contig8656:5382..5759Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8656 5383..5759 -
1692278170.944028-CDS-M-pyrifera_M_contig8656:5382..57591692278170.944028-CDS-M-pyrifera_M_contig8656:5382..5759Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8656 5383..5759 -
1622816774.9397378-CDS-M-pyrifera_M_contig8656:5816..65161622816774.9397378-CDS-M-pyrifera_M_contig8656:5816..6516Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8656 5817..6516 -
1692278170.955398-CDS-M-pyrifera_M_contig8656:5816..65161692278170.955398-CDS-M-pyrifera_M_contig8656:5816..6516Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8656 5817..6516 -
1622816774.9505432-CDS-M-pyrifera_M_contig8656:6998..70691622816774.9505432-CDS-M-pyrifera_M_contig8656:6998..7069Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8656 6999..7069 -
1692278170.967122-CDS-M-pyrifera_M_contig8656:6998..70691692278170.967122-CDS-M-pyrifera_M_contig8656:6998..7069Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8656 6999..7069 -
1622816774.9622734-CDS-M-pyrifera_M_contig8656:7108..82251622816774.9622734-CDS-M-pyrifera_M_contig8656:7108..8225Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8656 7109..8225 -
1692278170.9788885-CDS-M-pyrifera_M_contig8656:7108..82251692278170.9788885-CDS-M-pyrifera_M_contig8656:7108..8225Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8656 7109..8225 -
1622816774.9730976-CDS-M-pyrifera_M_contig8656:8951..91601622816774.9730976-CDS-M-pyrifera_M_contig8656:8951..9160Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8656 8952..9160 -
1692278170.9900734-CDS-M-pyrifera_M_contig8656:8951..91601692278170.9900734-CDS-M-pyrifera_M_contig8656:8951..9160Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8656 8952..9160 -
1622816774.98695-CDS-M-pyrifera_M_contig8656:9199..93621622816774.98695-CDS-M-pyrifera_M_contig8656:9199..9362Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8656 9200..9362 -
1692278171.0000057-CDS-M-pyrifera_M_contig8656:9199..93621692278171.0000057-CDS-M-pyrifera_M_contig8656:9199..9362Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8656 9200..9362 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8656.20141.1prot_M-pyrifera_M_contig8656.20141.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8656 4329..9362 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8656.20141.1

>prot_M-pyrifera_M_contig8656.20141.1 ID=prot_M-pyrifera_M_contig8656.20141.1|Name=mRNA_M-pyrifera_M_contig8656.20141.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=998bp
MSSAEVFCWGELTPAPGKESPGPVEVGRGSLVRRVYAGVGSAVLAGTESV
KWTRTNDGDGDGDGDGGDGNHEDSWGLPGVECVALAQDHTLLLRRVVSGD
GDGRDDDVGGVTQVLVWGSGRQGQLGLGSRTLESKTPTPIPALSAYRVVQ
VACGAHHSAAVTSHGDLFTWGRGIEGQLGHSSPHLPTELNEAITGVQFRP
KPVPAFLATKKRCRPVAGVSCGHNFTVVVTRAGEVWAFGEGSAGQIGVGR
ISKAPVPTIVMTACPATGEPFVEVAAGWAHALARTKGGGVFSWGFNAMGS
LGLGDYRTRFLPEAVTLRGDRLEGSGPRDLCGGPSGSSGPSGPRGSESSK
ISDRKKGGIAIKINACGHCSGVLTTEGELLTWGCHNAGRLGYSYGGVGDR
PEGMEYVPRPRRVDRLAGAELTDFALSGRGGVALIPLRVKSIHPASGPLE
TGCKVVIHGCGFWDSPDIVVKFTPVARGARPVAARSAVGTYVARCTDYGG
IERVTCVAPCFAFPEEVNVEVSVDGVSFTTDGIKFQYYRKPEMVQITPNT
CRPPFPRLRLDGAHITPCETLLVRFVEEGGERLGADGDVELKATQDSDRS
DSTLSPGPASRILTVAGRTESETIEVDIDPDTDLPILETRWFVTCDSPSL
PPPPQAKLPFISQVTVAPNGTTFEGEPLRFVAHDPHADTCLPTAVPVADT
NTVPAPIPAPADCDEETDAAAATAATGELISITGRNLYRGAGLAVRLRFD
DDGGGGGGSSSDDDSAIPLHAVAFDDATETVTGRLPAAAASLLTGSTGTA
VKDPARSPALGVVVEVTVDGKEFFTVPERLTLYRHPSLTLKGDGLYPVAG
GGWAELAVAGSTFRGHEAKARLWRPIFFCDGVDVTLPLLSSRPPGEIEAA
AGQPPGAATPSEKEQEKEKGGLKAVVGPPSSSDGSNKKPLATQTNGGKEL
APPDAEARGGGGGDSAEEEAASKENGRKGREVPVSRDSFFFAVPPLPK
back to top

mRNA from alignment at M-pyrifera_M_contig8656:4329..9362-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8656.20141.1 ID=mRNA_M-pyrifera_M_contig8656.20141.1|Name=mRNA_M-pyrifera_M_contig8656.20141.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5034bp|location=Sequence derived from alignment at M-pyrifera_M_contig8656:4329..9362- (Macrocystis pyrifera P11B4 male)
ATGTCGAGCGCAGAGGTCTTTTGTTGGGGGGAGCTAACCCCCGCGCCAGG CAAGGAAAGCCCTGGTCCTGTCGAAGTTGGCCGTGGCAGTCTAGTTCGAC GTGTGTATGCCGGCGTTGGATCCGCCGTTCTCGCGGGAACAGAGAGCGTG AAATGGACACGAAGTCGTCCACGCCCAAACCGTACAACAGACAGCAGTAC AGCCAACGACGGCGATGGCGATGGCGATGGCGATGGCGGTGATGGTAATC ACGAGGACTCGTGGGGCTTGCCGGGGGTAGAATGCGTGGCGTTGGCGCAG GACCATACGCTGCTGCTGCGAAGGGTTGTCAGCGGAGATGGAGATGGTAG GGATGATGACGTCGGGGGCGTGACGCAAGTACTTGTGTGGGGATCGGGTC GCCAAGGCCAGGTACGTACGATATGATACGTACATGGTTGCTAAAAAAGC GTGTGCGCGATGCTTGCTCTCGTCGTATGATACGAGACCGATACTCGTAA CACAAGTATCACCGTTCAACTTGGAGTTTCGCGAAGATCGCGGCTGTTAC GTAATCGACCCTATTTGGCACTTTTGTAGGTGCATGTTAATCTATCCTGC TACCAACATACGACATAAACGAGTTACTCCCGCCGCGTGCACCGCGTGTG AAGCGAAAACAAGGCAGTGCACCACTGCTGTAGATAAGTTCCTTTGCGAT CTGTCCTTCACACTTGTTCTGATGAAGTATTGTCAAGTTACCTTCAAAGA GAAACAGAGAGTCGCCGACCACGCGAGGCAGGTACGAGTAGCACACGCGG GACGGACGTAAATATCACGAAGCTTGCAAACCTGAGTATCGACCAAGTGT CTCGAACTCACAGCTGATGTATTGTTGTATCAATAGTATGTCGTACAGCA TTGTATTAAATAAAAAAATGAGTTCCATGGCCACACCAACAGCAGTGTCA TACCAACAGACGAGGAATCCTCTCGTATCCATCAAAATCACATCATATCT ACGAGCATTGTGGTAGGGCACGACTTAAAAGTATCGTTTTGTTTTATTGC TCCCACCCAAGCCACGGCAAGCAGTGGTCGGGTTACTTGGTTTTCTCTTA CTCGTACGTATCGGGACTCACTTTCTGACTGGCACAGCTGGGGCTCGGCT CGAGAACCTTGGAGAGCAAGACCCCTACGCCGATACCCGCGCTCAGCGCA TACCGCGTAGTGCAAGTGGCGTGCGGGGCGCACCACTCCGCCGCGGTGAC CTCGCACGGTGACCTCTTCACGTGGGGGCGGGGGATCGAGGGGCAGCTGG GACACTCCAGCCCCCACCTCCCGACCGAGCTCAACGAGGCTATAACGGGC GTGCAGTTCCGCCCCAAACCCGTGCCGGCCTTCCTGGCGACGAAGAAGCG CTGCCGCCCGGTGGCCGGAGTCTCCTGCGGGCACAACTTTACCGTTGTCG TGACCCGCGCAGGCGAGGTGTGGGCTTTCGGAGAAGGTTCCGCGGGGCAG ATAGGTGTTGGGCGGATATCCAAAGCCCCCGTGCCCACGATAGTAATGAC GGCGTGTCCCGCCACGGGGGAACCCTTCGTCGAAGTCGCTGCCGGGTGGG CGCATGCCCTCGCGAGAACCAAGGGAGGCGGGGTCTTCTCGTGGGGGTTT AACGCGATGGGATCGCTGGGCTTGGGAGACTACCGGACACGGTTTTTGCC TGAAGCTGTGACACTCCGAGGTGACCGGCTCGAGGGCAGCGGGCCTAGAG ACCTCTGCGGCGGCCCAAGCGGCTCAAGTGGCCCAAGTGGCCCAAGGGGC AGCGAAAGTAGTAAGATCAGTGATCGCAAGAAAGGGGGAATTGCCATCAA AATTAACGCCTGCGGGCATTGTTCCGGCGTGCTGACAACCGAGGGCGAGC TCCTAACCTGGGGCTGCCACAACGCCGGCCGATTGGGATACAGCTATGGC GGGGTCGGTGACCGACCCGAAGGGATGGAGTACGTCCCTCGCCCGCGGCG TGTGGATCGTCTTGCGGGAGCGGAGTTAACGGACTTTGCGCTCTCTGGCA GGGGTGGCGTCGCGCTCATCCCGCTCCGTGTCAAGTCCATACATCCCGCG TCGGGTCCCCTTGAGACCGGATGCAAAGTTGTCATTCATGGGTGCGGTTT TTGGGATTCGCCGGATATAGTTGTGAAGTTTACGCCGGTCGCAAGGGGGG CTAGGCCGGTCGCGGCCCGGTCGGCGGTGGGGACGTACGTAGCGCGTTGC ACTGGTGGGCCCGAGGCCGGGGCCGACGACGACGAGTTCGGAGACTACGG CGGCATCGAGCGGGTGACGTGCGTGGCGCCGTGCTTTGCGTTCCCGGAGG AGGTTAACGTAGAGGTGAGAGTAGACGGAAGTGGTGGCCCAAAATAGGAA ACGCGTGATTGATGACGACGCCTTTGAATTGTGTGCACGACTTCGCGCTG CCTCATAAACCGCTCTGCGGTCGAAGCACCGATGTCGACGGGGGTTTTAG TGCTACACGCGTTGAGCTTTTGCATAAACTGCTCGCCTGTGAATCGTGTC TACAGTGTTTGGTCGGGCTCACAGTCACATCCTTCCGGATAGGCTGAAAC ATGCTCAACCTTGTTCGACGCGTATCTACGCGCAGGTGTTGGCGATTCAT GCCCAGCGTAGCCACCTTTCTGCTTACATGGCTTGTCCATGCACACAGGG CGCGCTGTCAGTAGGTAACACGTGGAGGTTGGCTCAGAAGCACCGACACG TTTCCTGCCCGCCTCTGGATTGCGCAGAGCCATGACGTCTATGTCACAAC GCACTCTTCCAAGATTCCCGCTCAATGTGTTTGTTTTTTCTCATAGGTGT CAGTCGACGGGGTGTCATTCACCACGGACGGTATCAAGTTTCAGTACTAC AGAAAACCGGAGATGGTCCAGATCACCCCGAATACGTGCAGGCCGCCTTT CCCGAGGCTCCGGTTGGACGGCGCGCATATTACCCCTTGCGAAACCCTCT TGGTGCGCTTCGTCGAGGAAGGGGGAGAGAGGCTTGGAGCCGACGGTGAT GTAGAGCTTAAAGCTACTCAAGACAGTGATCGCAGCGACTCCACCCTATC GCCGGGACCTGCGAGCAGAATTCTTACCGTTGCAGGACGAACAGAATCCG AGACCATCGAGGTAGACATAGACCCGGACACAGATCTCCCAATACTTGAA ACGCGGTGGTTCGTCACCTGCGACAGCCCCTCGCTCCCTCCACCACCGCA GGCAAAGCTACCGTTCATCTCTCAGGTAACCGTTGCCCCGAACGGTACCA CCTTCGAGGGAGAGCCTCTGCGATTTGTTGCGCACGATCCGCACGCAGAC ACTTGCCTTCCGACGGCCGTGCCGGTCGCCGACACCAATACCGTCCCCGC CCCCATCCCCGCCCCCGCTGACTGCGACGAAGAGACGGATGCTGCTGCTG CTACTGCGGCTACGGGGGAGCTTATCAGCATCACGGGCCGCAACCTCTAC CGCGGCGCGGGTCTCGCCGTCCGTCTTCGCTTCGACGATGACGGCGGTGG CAGTAGTGGCGGTGGCGGTGGCGGCGACAGCGTCGACGGTGGCGGCAGTG GAGGCGGCGGCGGTGGCAGCAGCAGCGATGACGACAGCGCCATTCCCCTC CACGCAGTGGCATTCGACGACGCCACGGAAACCGTCACGGGGCGCCTGCC CGCCGCGGCGGCTTCGCTTCTGACTGGATCGACGGGCACGGCCGTCAAGG ACCCGGCACGCTCACCGGCGCTCGGGGTCGTGGTAGAAGTTACCGTCGAC GGCAAGGAATTTTTTACCGTACCGGAGAGGTTAACGCTGTACCGCCACCC CAGCCTCACCTTGAAGGGCGACGGTCTCTATCCCGTGGCGGGTGGAGGAT GGGCCGAGCTGGCGGTGGCAGGGTCTACCTTTCGCGGACACGAGGCGAAG GCGAGACTGTGGCGCCCAATATTTTTTTGCGTGATATCAAAGTAGGCAGT TGTGATGTGGCTGATTCGCAGGTAGTTTGCTTTCTCGCCGAACCTGGTGC CTGGTGGACTATATGTCAGTAGCTTTCCGTGACGATGCTACATCTTAACT AGTTTCCCACTGAGTTATTTGGCGGCCGTTTTTTGTCCTGTATCGCTGTT GGTGGACTCGGGGGGAACGTTTTGCTGGGTTTGTTATTTTTTCGTCGCCT TGGGTGGGTGGGTAGGTGGGTGGGTGGTCAATTAAGCAGAGTATTGCCCC CTTACGCCGAGAGCCAGCCGGGGAAATCTTTGATGTTTTGTACCGCAACC AGGCAATCATCCAAACGATGCTCGTCCTTCCACGAGGAAAGCCAGTCTTC ATGACGATATGATTAATTTTAAACTAGTGGAATGCACTCAGCAACTTCGG AGTTACTTCGATAGCGTACCCAAACAAAGACGTGGCGCAAAACCACCCCA CCCGGCGACCATTATTGAAACACAGTATACGTCAACCTATGTTTTTTCTT CCGCCCCCCTCACCTTCCGCCCCTCAACTCCCTCATTATCATCAGCGCCA TCAATGTTTTTTTTCTCTGCCCGCCACATCTCCCTCCGCCCCTGAACAGC CCCCTCCCCCCCTTGTTCCACACGGCCCTGCCCCTGCGACTGACCATATC TGCCAGGTTCGTTTGGTGTCGGTTGAGGATGGCGTGGACGTCACACTACC GTTGCTGTCCTCTCGACCCCCTGGCGAGATCGAAGCCGCCGCAGGACAGC CTCCCGGCGCGGCCACCCCTTCCGAAAAGGAGCAAGAGAAAGAGAAGGGC GGCCTTAAGGCGGTGGTTGGACCACCCTCTTCAAGCGACGGGAGCAACAA GAAGCCTTTGGCGACGCAAACCAACGGTGGCAAAGAGCTTGCACCGCCAG ACGCAGAAGCACGCGGCGGTGGCGGCGGCGATAGCGCGGAGGAGGAGGCA GCGTCGAAGGAGAACGGCCGTAAAGGGCGAGAAGTGCCGGTGTCGCGCGA TTCTTTCTTTTTCGCGGTGCCGCCGCTACCCAAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig8656:4329..9362-

>mRNA_M-pyrifera_M_contig8656.20141.1 ID=mRNA_M-pyrifera_M_contig8656.20141.1|Name=mRNA_M-pyrifera_M_contig8656.20141.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=5988bp|location=Sequence derived from alignment at M-pyrifera_M_contig8656:4329..9362- (Macrocystis pyrifera P11B4 male)
ATGTCGAGCGCAGAGGTCTTTTGTTGGGGGGAGCTAACCCCCGCGCCAGG
CAAGGAAAGCCCTGGTCCTGTCGAAGTTGGCCGTGGCAGTCTAGTTCGAC
GTGTGTATGCCGGCGTTGGATCCGCCGTTCTCGCGGGAACAGAGAGCGTG
AAATGGACACGAAATGTCGAGCGCAGAGGTCTTTTGTTGGGGGGAGCTAA
CCCCCGCGCCAGGCAAGGAAAGCCCTGGTCCTGTCGAAGTTGGCCGTGGC
AGTCTAGTTCGACGTGTGTATGCCGGCGTTGGATCCGCCGTTCTCGCGGG
AACAGAGAGCGTGAAATGGACACGAACCAACGACGGCGATGGCGATGGCG
ATGGCGATGGCGGTGATGGTAATCACGAGGACTCGTGGGGCTTGCCGGGG
GTAGAATGCGTGGCGTTGGCGCAGGACCATACGCTGCTGCTGCGAAGGGT
TGTCAGCGGAGATGGAGATGGTAGGGATGATGACGTCGGGGGCGTGACGC
AAGTACTTGTGTGGGGATCGGGTCGCCAAGGCCAGCCAACGACGGCGATG
GCGATGGCGATGGCGATGGCGGTGATGGTAATCACGAGGACTCGTGGGGC
TTGCCGGGGGTAGAATGCGTGGCGTTGGCGCAGGACCATACGCTGCTGCT
GCGAAGGGTTGTCAGCGGAGATGGAGATGGTAGGGATGATGACGTCGGGG
GCGTGACGCAAGTACTTGTGTGGGGATCGGGTCGCCAAGGCCAGCTGGGG
CTCGGCTCGAGAACCTTGGAGAGCAAGACCCCTACGCCGATACCCGCGCT
CAGCGCATACCGCGTAGTGCAAGTGGCGTGCGGGGCGCACCACTCCGCCG
CGGTGACCTCGCACGGTGACCTCTTCACGTGGGGGCGGGGGATCGAGGGG
CAGCTGGGACACTCCAGCCCCCACCTCCCGACCGAGCTCAACGAGGCTAT
AACGGGCGTGCAGTTCCGCCCCAAACCCGTGCCGGCCTTCCTGGCGACGA
AGAAGCGCTGCCGCCCGGTGGCCGGAGTCTCCTGCGGGCACAACTTTACC
GTTGTCGTGACCCGCGCAGGCGAGGTGTGGGCTTTCGGAGAAGGTTCCGC
GGGGCAGATAGGTGTTGGGCGGATATCCAAAGCCCCCGTGCCCACGATAG
TAATGACGGCGTGTCCCGCCACGGGGGAACCCTTCGTCGAAGTCGCTGCC
GGGTGGGCGCATGCCCTCGCGAGAACCAAGGGAGGCGGGGTCTTCTCGTG
GGGGTTTAACGCGATGGGATCGCTGGGCTTGGGAGACTACCGGACACGGT
TTTTGCCTGAAGCTGTGACACTCCGAGGTGACCGGCTCGAGGGCAGCGGG
CCTAGAGACCTCTGCGGCGGCCCAAGCGGCTCAAGTGGCCCAAGTGGCCC
AAGGGGCAGCGAAAGTAGTAAGATCAGTGATCGCAAGAAAGGGGGAATTG
CCATCAAAATTAACGCCTGCGGGCATTGTTCCGGCGTGCTGACAACCGAG
GGCGAGCTCCTAACCTGGGGCTGCCACAACGCCGGCCGATTGGGATACAG
CTATGGCGGGGTCGGTGACCGACCCGAAGGGATGGAGTACGTCCCTCGCC
CGCGGCGTGTGGATCGTCTTGCGGGAGCGGAGTTAACGGACTTTGCGCTC
TCTGGCAGGGGTGGCGTCGCGCTCATCCCGCTCCGTGTCAAGTCCATACA
TCCCGCGTCGGGTCCCCTTGAGACCGGATGCAAAGTTGTCATTCATGGGT
GCGGTTTTTGGGATTCGCCGGATATAGTTGTGAAGTTTACGCCGGTCGCA
AGGGGGGCTAGGCCGGTCGCGGCCCGGTCGGCGGTGGGGACGTACGTAGC
GCGTTGCACTGCTGGGGCTCGGCTCGAGAACCTTGGAGAGCAAGACCCCT
ACGCCGATACCCGCGCTCAGCGCATACCGCGTAGTGCAAGTGGCGTGCGG
GGCGCACCACTCCGCCGCGGTGACCTCGCACGGTGACCTCTTCACGTGGG
GGCGGGGGATCGAGGGGCAGCTGGGACACTCCAGCCCCCACCTCCCGACC
GAGCTCAACGAGGCTATAACGGGCGTGCAGTTCCGCCCCAAACCCGTGCC
GGCCTTCCTGGCGACGAAGAAGCGCTGCCGCCCGGTGGCCGGAGTCTCCT
GCGGGCACAACTTTACCGTTGTCGTGACCCGCGCAGGCGAGGTGTGGGCT
TTCGGAGAAGGTTCCGCGGGGCAGATAGGTGTTGGGCGGATATCCAAAGC
CCCCGTGCCCACGATAGTAATGACGGCGTGTCCCGCCACGGGGGAACCCT
TCGTCGAAGTCGCTGCCGGGTGGGCGCATGCCCTCGCGAGAACCAAGGGA
GGCGGGGTCTTCTCGTGGGGGTTTAACGCGATGGGATCGCTGGGCTTGGG
AGACTACCGGACACGGTTTTTGCCTGAAGCTGTGACACTCCGAGGTGACC
GGCTCGAGGGCAGCGGGCCTAGAGACCTCTGCGGCGGCCCAAGCGGCTCA
AGTGGCCCAAGTGGCCCAAGGGGCAGCGAAAGTAGTAAGATCAGTGATCG
CAAGAAAGGGGGAATTGCCATCAAAATTAACGCCTGCGGGCATTGTTCCG
GCGTGCTGACAACCGAGGGCGAGCTCCTAACCTGGGGCTGCCACAACGCC
GGCCGATTGGGATACAGCTATGGCGGGGTCGGTGACCGACCCGAAGGGAT
GGAGTACGTCCCTCGCCCGCGGCGTGTGGATCGTCTTGCGGGAGCGGAGT
TAACGGACTTTGCGCTCTCTGGCAGGGGTGGCGTCGCGCTCATCCCGCTC
CGTGTCAAGTCCATACATCCCGCGTCGGGTCCCCTTGAGACCGGATGCAA
AGTTGTCATTCATGGGTGCGGTTTTTGGGATTCGCCGGATATAGTTGTGA
AGTTTACGCCGGTCGCAAGGGGGGCTAGGCCGGTCGCGGCCCGGTCGGCG
GTGGGGACGTACGTAGCGCGTTGCACTGACTACGGCGGCATCGAGCGGGT
GACGTGCGTGGCGCCGTGCTTTGCGTTCCCGGAGGAGGTTAACGTAGAGA
CTACGGCGGCATCGAGCGGGTGACGTGCGTGGCGCCGTGCTTTGCGTTCC
CGGAGGAGGTTAACGTAGAGGTGTCAGTCGACGGGGTGTCATTCACCACG
GACGGTATCAAGTTTCAGTACTACAGAAAACCGGAGATGGTCCAGATCAC
CCCGAATACGTGCAGGCCGCCTTTCCCGAGGCTCCGGTTGGACGGCGCGC
ATATTACCCCTTGCGAAACCCTCTTGGTGCGCTTCGTCGAGGAAGGGGGA
GAGAGGCTTGGAGCCGACGGTGATGTAGAGCTTAAAGCTACTCAAGACAG
TGATCGCAGCGACTCCACCCTATCGCCGGGACCTGCGAGCAGAATTCTTA
CCGTTGCAGGACGAACAGAATCCGAGACCATCGAGGTAGACATAGACCCG
GACACAGATCTCCCAATACTTGAAACGCGGTGGTTCGTCACCTGCGACAG
CCCCTCGCTCCCTCCACCACCGCAGGCAAAGCTACCGTTCATCTCTCAGG
TAACCGTTGCCCCGAACGGTACCACCTTCGAGGGAGAGCCTCTGCGATTT
GTTGCGCACGATCCGCACGCAGACACTTGCCTTCCGACGGCCGTGCCGGT
CGCCGACACCAATACCGTCCCCGCCCCCATCCCCGCCCCCGCTGACTGCG
ACGAAGAGACGGATGCTGCTGCTGCTACTGCGGCTACGGGGGAGCTTATC
AGCATCACGGGCCGCAACCTCTACCGCGGCGCGGGTCTCGCCGTCCGTCT
TCGCTTCGACGATGACGGCGGTGTCAGTCGACGGGGTGTCATTCACCACG
GACGGTATCAAGTTTCAGTACTACAGAAAACCGGAGATGGTCCAGATCAC
CCCGAATACGTGCAGGCCGCCTTTCCCGAGGCTCCGGTTGGACGGCGCGC
ATATTACCCCTTGCGAAACCCTCTTGGTGCGCTTCGTCGAGGAAGGGGGA
GAGAGGCTTGGAGCCGACGGTGATGTAGAGCTTAAAGCTACTCAAGACAG
TGATCGCAGCGACTCCACCCTATCGCCGGGACCTGCGAGCAGAATTCTTA
CCGTTGCAGGACGAACAGAATCCGAGACCATCGAGGTAGACATAGACCCG
GACACAGATCTCCCAATACTTGAAACGCGGTGGTTCGTCACCTGCGACAG
CCCCTCGCTCCCTCCACCACCGCAGGCAAAGCTACCGTTCATCTCTCAGG
TAACCGTTGCCCCGAACGGTACCACCTTCGAGGGAGAGCCTCTGCGATTT
GTTGCGCACGATCCGCACGCAGACACTTGCCTTCCGACGGCCGTGCCGGT
CGCCGACACCAATACCGTCCCCGCCCCCATCCCCGCCCCCGCTGACTGCG
ACGAAGAGACGGATGCTGCTGCTGCTACTGCGGCTACGGGGGAGCTTATC
AGCATCACGGGCCGCAACCTCTACCGCGGCGCGGGTCTCGCCGTCCGTCT
TCGCTTCGACGATGACGGCGGCGGCGGCGGTGGCAGCAGCAGCGATGACG
ACAGCGCCATTCCCCTCCACGCAGTGGCATTCGACGACGCCACGGAAACC
GTCACGGGGCGCCTGCCCGCCGCGGCGGCTTCGCTTCTGACTGGATCGAC
GGGCACGGCCGTCAAGGACCCGGCACGCTCACCGGCGCTCGGGGTCGTGG
TAGAAGTTACCGTCGACGGCAAGGAATTTTTTACCGTACCGGAGAGGTTA
ACGCTGTACCGCCACCCCAGCCTCACCTTGAAGGGCGACGGTCTCTATCC
CGTGGCGGGTGGAGGATGGGCCGAGCTGGCGGTGGCAGGGTCTACCTTTC
GCGGACACGAGGCGAAGGCGAGACTGTGGCGCCCAATATTTTTTTGCGCG
GCGGCGGTGGCAGCAGCAGCGATGACGACAGCGCCATTCCCCTCCACGCA
GTGGCATTCGACGACGCCACGGAAACCGTCACGGGGCGCCTGCCCGCCGC
GGCGGCTTCGCTTCTGACTGGATCGACGGGCACGGCCGTCAAGGACCCGG
CACGCTCACCGGCGCTCGGGGTCGTGGTAGAAGTTACCGTCGACGGCAAG
GAATTTTTTACCGTACCGGAGAGGTTAACGCTGTACCGCCACCCCAGCCT
CACCTTGAAGGGCGACGGTCTCTATCCCGTGGCGGGTGGAGGATGGGCCG
AGCTGGCGGTGGCAGGGTCTACCTTTCGCGGACACGAGGCGAAGGCGAGA
CTGTGGCGCCCAATATTTTTTTGCGATGGCGTGGACGTCACACTACCGTT
GCTGTCCTCTCGACCCCCTGGCGAGATCGAAGCCGCCGCAGGACAGCCTC
CCGGCGCGGCCACCCCTTCCGAAAAGGAGCAAGAGAAAGAGAAGGGCGGC
CTTAAGGCGGTGGTTGGACCACCCTCTTCAAGCGACGGGAGCAACAAGAA
GCCTTTGGCGACGCAAACCAACGGTGGCAAAGAGCTTGCACCGCCAGACG
CAGAAGCACGCGGCGGTGGCGGCGGCGATAGCGCGGAGGAGGAGGCAGCG
TCGAAGGAGAACGGCCGTAAAGGGCGAGAAGTGCCGGTGTCGCGCGATTC
TTTCTTTTTCGCGGTGCCGCCGCTACCCAAGGATGGCGTGGACGTCACAC
TACCGTTGCTGTCCTCTCGACCCCCTGGCGAGATCGAAGCCGCCGCAGGA
CAGCCTCCCGGCGCGGCCACCCCTTCCGAAAAGGAGCAAGAGAAAGAGAA
GGGCGGCCTTAAGGCGGTGGTTGGACCACCCTCTTCAAGCGACGGGAGCA
ACAAGAAGCCTTTGGCGACGCAAACCAACGGTGGCAAAGAGCTTGCACCG
CCAGACGCAGAAGCACGCGGCGGTGGCGGCGGCGATAGCGCGGAGGAGGA
GGCAGCGTCGAAGGAGAACGGCCGTAAAGGGCGAGAAGTGCCGGTGTCGC
GCGATTCTTTCTTTTTCGCGGTGCCGCCGCTACCCAAG
back to top