prot_M-pyrifera_M_contig86527.20137.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86527.20137.1
Unique Nameprot_M-pyrifera_M_contig86527.20137.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length236
Homology
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BLAST of mRNA_M-pyrifera_M_contig86527.20137.1 vs. uniprot
Match: A0A7V8V7P3_9BACT (Uncharacterized protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8V7P3_9BACT)

HSP 1 Score: 67.8 bits (164), Expect = 1.340e-9
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 
Query:  204 IVTRTGVTGEGAATLATQLPETEIQHVYKPEN 235
            IVTRTGVTGEGAATLATQLPETEIQHVYKPEN
Sbjct:  326 IVTRTGVTGEGAATLATQLPETEIQHVYKPEN 357
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BLAST of mRNA_M-pyrifera_M_contig86527.20137.1 vs. uniprot
Match: A0A518C479_9BACT (Leucine Rich repeats (2 copies) n=1 Tax=Bremerella volcania TaxID=2527984 RepID=A0A518C479_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 3.790e-5
Identity = 26/32 (81.25%), Postives = 27/32 (84.38%), Query Frame = 0 
Query:  204 IVTRTGVTGEGAATLATQLPETEIQHVYKPEN 235
            IVTRTGVT EGAA LA +LPETEIQHVY  EN
Sbjct:  326 IVTRTGVTSEGAAALANKLPETEIQHVYMTEN 357
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86527.20137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7V8V7P3_9BACT1.340e-9100.00Uncharacterized protein n=1 Tax=Bremerella alba Ta... [more]
A0A518C479_9BACT3.790e-581.25Leucine Rich repeats (2 copies) n=1 Tax=Bremerella... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 7..25
e-value: 1.9
score: 8.7
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 7..27
score: 5.017
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 127..150
score: 4.632
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 151..174
score: 7.242
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 142..234
e-value: 8.1E-12
score: 46.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..141
e-value: 1.8E-25
score: 91.2
NoneNo IPR availablePANTHERPTHR15140TUBULIN-SPECIFIC CHAPERONE Ecoord: 6..218
NoneNo IPR availablePANTHERPTHR15140:SF20coord: 6..218
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 2..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86527contigM-pyrifera_M_contig86527:3..710 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86527.20137.1mRNA_M-pyrifera_M_contig86527.20137.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86527 3..710 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86527.20137.1 ID=prot_M-pyrifera_M_contig86527.20137.1|Name=mRNA_M-pyrifera_M_contig86527.20137.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=236bp
QICQCGKLKNLQFRGNPITDADLKHVGRLTQLKVLGLDETAVEGATFDRL
VGLKQLEELYLFGTPFQEANLAKLAPFTKLKRIRLRGTKIDGSGFESLAE
LNALEDLDVSETNFSDAAVEHLLNHNGLKKLNLWATKITDQSLPNVAQLT
SLEWLNLDRNSIGDAQIEELTKLPSVTWLHLGSTSLTNDGLQKLAPMTQL
KTLIVTRTGVTGEGAATLATQLPETEIQHVYKPEN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf