mRNA_M-pyrifera_M_contig86442.20127.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86442.20127.1 vs. uniprot
Match: A0A5A8CP20_CAFRO (Chitin-binding type-2 domain-containing protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CP20_CAFRO) HSP 1 Score: 150 bits (378), Expect = 6.390e-38 Identity = 97/218 (44.50%), Postives = 133/218 (61.01%), Query Frame = 1 Query: 13 SDLTITSLTPSRGPTG--TAVRVSGTGFSSGSSLVCRFGLITTPAQFVSDTEVVCVVPTGVEGDVDVRVSVNGVDFSSPSPTPFSLSTIPRITSLSPSSGPVSGGTLIDVFGDGF--SAPAVCLFGGSDEVVGEVSNSTHVSCRSPSWTSAESVGVEVGV-GEEQSQDGAVFRFVPESSISHIAPSSGPIVGGTLVTIHGAGFVDGGALVCGFGSSVV 651 +D + SL P+RGP G + V V G+GF+ G +L CRFGL + A +VS+ EV C P G V+V+VS NGVDF P F ++ R+ L+P+ G V+GG+++ V G F S C FG S V G +++ V C SP +A SV VEV G + ++D A FR+VP +S+SH+ PSS P GGTLVT+HG+GFVD + C FGS+ V Sbjct: 2782 ADEGVESLVPARGPAGGGSVVSVRGSGFAFGGALQCRFGLASVAAVWVSEGEVRCETPDVPAGRVEVQVSNNGVDFG-PGSAWFEFVSVARVAGLTPAVGSVAGGSVVRVAGASFENSTGLGCRFG-STLVAGRFVSASEVECVSPGRGTAGSVSVEVTTNGADFTEDAAQFRYVPAASVSHVTPSSAPARGGTLVTVHGSGFVDAASTSCRFGSASV 2997
BLAST of mRNA_M-pyrifera_M_contig86442.20127.1 vs. uniprot
Match: A0A5A8CPQ3_CAFRO (Chitin-binding type-2 domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CPQ3_CAFRO) HSP 1 Score: 149 bits (377), Expect = 8.690e-38 Identity = 97/218 (44.50%), Postives = 132/218 (60.55%), Query Frame = 1 Query: 13 SDLTITSLTPSRGPTG--TAVRVSGTGFSSGSSLVCRFGLITTPAQFVSDTEVVCVVPTGVEGDVDVRVSVNGVDFSSPSPTPFSLSTIPRITSLSPSSGPVSGGTLIDVFGDGF--SAPAVCLFGGSDEVVGEVSNSTHVSCRSPSWTSAESVGVEVGV-GEEQSQDGAVFRFVPESSISHIAPSSGPIVGGTLVTIHGAGFVDGGALVCGFGSSVV 651 +D + SL P+RGP G + V V G+GF+ G +L CRFGL A +VS+ EV C P G V+V+VS NGVDF P F ++ R+ L+P+ G V+GG+++ V G F S C FG S V G +++ V C SP +A SV VEV G + ++D A FR+VP +S+SH+ PSS P GGTLVT+HG+GFVD + C FGS+ V Sbjct: 2257 ADEGVESLVPARGPAGGGSVVSVRGSGFAFGGALQCRFGLAAVAAVWVSEGEVRCETPDVPAGRVEVQVSNNGVDFG-PGSAWFEFVSVARVAGLTPAVGSVAGGSVVRVAGASFENSTGLGCRFG-STLVAGRFVSASEVECVSPGRGTAGSVSVEVTTNGADFTEDAAQFRYVPAASVSHVTPSSAPARGGTLVTVHGSGFVDAASTSCRFGSASV 2472
BLAST of mRNA_M-pyrifera_M_contig86442.20127.1 vs. uniprot
Match: A0A5A8EE09_CAFRO (Chitin-binding type-2 domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EE09_CAFRO) HSP 1 Score: 140 bits (352), Expect = 1.930e-34 Identity = 99/234 (42.31%), Postives = 134/234 (57.26%), Query Frame = 1 Query: 1 FTFISDLTITSLTPSRGPT--GTAVRVSGTGFSS--------GSSLV----CRFGLITTPAQFVSDTEVVCVVPTGVEGDVDVRVSVNGVDFSSPSPTPFSLSTIPRITSLSPSSGPVSGGTLIDVFGDGF--SAPAVCLFGGSDEVVGEVSNSTHVSCRSPSWTSAESVGVEVGV-GEEQSQDGAVFRFVPESSISHIAPSSGPIVGGTLVTIHGAGFVDGGALVCGFGSSVV 651 F F+S + LTP+ G G+ VRV+G F + GS+LV CRFGL A +VS+ EV C P G V+V+VS NGVDF P F ++ R+ L+P+ G V+GG+++ V G F S C FG S V G +++ V C SP +A SV VEV G + ++D A FR+VP +S+SH+ PSS P GGTLVT+HG+GFVD + C FGS+ V Sbjct: 2390 FEFVSVARVAGLTPAVGSVAGGSVVRVAGASFENSTGLGCRFGSTLVAGRFCRFGLAAVAAVWVSEGEVRCETPDVPAGRVEVQVSNNGVDFG-PGSAWFEFVSVARVAGLTPAVGSVAGGSVVRVAGASFENSTGLGCRFG-STLVAGRFVSASEVECVSPGRGTAGSVSVEVTTNGADFTEDAAQFRYVPAASVSHVTPSSAPARGGTLVTVHGSGFVDAASTSCRFGSASV 2621
BLAST of mRNA_M-pyrifera_M_contig86442.20127.1 vs. uniprot
Match: A0A7S2QV53_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QV53_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.250e-28 Identity = 80/221 (36.20%), Postives = 116/221 (52.49%), Query Frame = 1 Query: 1 FTFISDLTITSLTPSRGPT--GTAVRVSGTGFSSGSSLVCRFGLITTPAQFVSDTEVVCVVPTGVEGDVDVRVSVNGVDFSSPSPTPFSLSTIPRITSLSPSSGPVSGGTLIDVFGDGF--SAPAVCLFGGSDEVVGEVSNSTHVSCRSPSWTSAESVGVEVGV-GEEQSQDGAVFRFVPESSISHIAPSSGPIVGGTLVTIHGAGFVDGGALVCGFGSSV 648 F++ + S+ P R G AV ++G GF + +S+ C FG I P +++S T + C P+ +GDV + VS+NG DF++ S FS + + +TS+SP+ GP+ GGT + V G F S C FG + V + T V C P S+ +V V V G E A F + P +S + PS G I GGT++ + G GF D AL C FG V Sbjct: 452 FSYFQSFAVLSVEPDRAGVNGGDAVLLTGYGFVNDASIKCSFGGIKVPGKYISSTSIECNAPSMSQGDVALEVSLNGEDFTTGSGISFSFTGVASVTSISPTFGPIGGGTSVTVTGSDFEFSKNLKCRFGAAAIVSAGYVSPTEVVCVVPPTASSGTVSVSVSNNGLEFDPSPANFDYKPAIVVSKVTPSVGSIAGGTIILVEGTGFEDSSALACAFGGDV 672
BLAST of mRNA_M-pyrifera_M_contig86442.20127.1 vs. uniprot
Match: A0A7S4J3J5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3J5_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.750e-24 Identity = 85/219 (38.81%), Postives = 110/219 (50.23%), Query Frame = 1 Query: 1 FTFISDLTITSLTPSRGPT--GTAVRVSGTGFSSGSSLVCRFGLITTPAQFVSDTEVVCVVPTGVEGDVDVRVSVNGVDFSSPSPTPFSLSTIPRITSLSPSSGPVSGGTLIDVFGDGF--SAPAVCLFGGSDEVVGEVSNSTHVSCRSPSWTS-AESVGVEV-GVGEEQSQDGAVFRFVPESSISHIAPSSGPIVGGTLVTIHGAGFVDGGALVCGFG 639 F ++SD ITS+ P GP GT V ++G+ F SL+C FG +FVS TE+ C+ P GDV + VS NG DF S PF I+S SP SG V GGT + V G F S C FG S V NST V+C SP S A S+ V GV S ++ ++ + I+P +G + GGT VT+ G GF + C FG Sbjct: 4 FKYVSDPIITSMNPEMGPVTGGTMVSLAGSNFLDNDSLMCVFGDARVEGRFVSSTEIECISPEHGAGDVLISVSTNGEDFIG-SRVPFVYYEEVEISSFSPESGVVLGGTPVVVRGSNFALSKSLSCRFG-SVAVAARYVNSTAVACYSPPGESGAVSLSVSRNGVDYAASSGSMLYIYMESLEVVDISPRTGSVSGGTAVTVSGRGFSSSMDIWCSFG 220
BLAST of mRNA_M-pyrifera_M_contig86442.20127.1 vs. uniprot
Match: A0A254NLA8_9BACL (Uncharacterized protein n=2 Tax=Saccharibacillus sp. O23 TaxID=2009338 RepID=A0A254NLA8_9BACL) HSP 1 Score: 105 bits (261), Expect = 2.470e-22 Identity = 72/216 (33.33%), Postives = 113/216 (52.31%), Query Frame = 1 Query: 1 FTFISDLTITSLTPSRGPT--GTAVRVSGTGFSSGSSLVCRF---GLITTPAQFVSDTEVVCVVPTGVEGDVDVRVSVNGVDFSSPSPTPFSLSTIPRITSLSPSSGPVSGGTLIDVFGDGFSAPAVCLFGGSDEVVGEVSNSTHVSCRSPSWTSAESVGVEVGVGEEQSQDGAVFRFVPESSISHIAPSSGPIVGGTLVTIHGAGFVDGGALVCG 633 FT+I+ TI S++P+ GP GT + ++GTGF+S S+++ G+ T VS T++ V P G G V V+ G ++ F+ P I S+SP+SGP +GGT I + G GF+A + GG+ V + T ++ +P+ T A +VGV F ++ +I+ ++P+SGP GGT +TI G GF G + G Sbjct: 592 FTYIAAPTIASVSPTSGPAAGGTTITITGTGFTSESTVIVGGSIGGVNATNVNVVSPTQITAVTPPGTAGAKSVSVTTAGGTATANGA--FTYIAAPTIASVSPTSGPAAGGTTITITGTGFTAGSTVTVGGNAATAITVDSPTQITATTPAGT-AGAVGVSXXXXXXXXXANGAFTYIAAPTIASVSPTSGPAAGGTTITITGTGFTAGSTVTVG 804
BLAST of mRNA_M-pyrifera_M_contig86442.20127.1 vs. uniprot
Match: A0A835ZA69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA69_9STRA) HSP 1 Score: 104 bits (260), Expect = 3.760e-22 Identity = 89/231 (38.53%), Postives = 124/231 (53.68%), Query Frame = 1 Query: 34 LTPSRGPT--GTAVRVSGTGFSSGSSLVCRFGL------ITTPAQFVSDTEVVCVVPTGVEGD-VDVRVSVNGVDFSSPSPTPFSLSTIPRITSLSPSSGPVSGGTLIDVFGDGFSAPAVCL--FGGSDEVVGEVSNSTHVSCRSPSWTS-----AESVGVEV-GVGEEQSQDGAVFRFVPESSISHIAPSSGPIVGGTLVTIHGAGFVDGGALVCGFGSSV--VVGRWVS 669 L+P+ GP GT+VRV G F++ ++L CRFG + PA F S VVC P G G V V V+VNG +++ + FS P +T+++PSSGP SGG + + G GF+A A FG D VS S + C +P + A SV V V GV S D + FV +++ ++P++G VGGT VT++GAGF D L C FG+ V R+VS Sbjct: 2959 LSPASGPASGGTSVRVRGAHFAASAALRCRFGAAAAAAAMVVPAWFESPRAVVCSAPPGAAGSTVPVDVTVNGAEYTDAALL-FSYYEPPVVTAVAPSSGPASGGAAVAIRGSGFAAAAALTVRFGVVDMPAVYVSAS-ELHCAAPRAPADGGGGAVSVAVSVNGVNFSASSD-VTYTFVRRATVVELSPATGTAVGGTTVTVYGAGFEDTEQLACRFGAGAAPVRARFVS 3186
BLAST of mRNA_M-pyrifera_M_contig86442.20127.1 vs. uniprot
Match: A0A7S0YYM4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YYM4_9CRYP) HSP 1 Score: 103 bits (256), Expect = 5.550e-22 Identity = 83/218 (38.07%), Postives = 119/218 (54.59%), Query Frame = 1 Query: 31 SLTPSRGPTGTA---VRVSGTGFSSGSSLVCRFGLI-TTPAQFVSDTEVVCVVPTGVEGDVDVRVSVNGVDFSSPSPTPFSLSTIPRITSLSPSSGPVSGGT--LIDVFGDGFSAPAV-CLFGGSDEVVGEVSNSTHVSCRSPSWTSAESVGVEV--GVGEEQSQDGAVFRFVPESSISHIAPSSGPIVGGTLVTIHGAGFVDGGALVCGFGSSVVVG 657 S+TPSRG +G V V G+ F+ GS L CRFG+ + A + S + V+C P+ G V V VS NGVD+S+ + + S+SPS GPVSGGT L+ V G + V C+FG + EV + SC +PS SA V V V G G + G + + ++++ + PS+G I GGT+V++ G F G ++ C FG+SVV G Sbjct: 41 SVTPSRGTSGVEGQIVTVIGSDFAHGSDLSCRFGVNGSVSALYESSSLVMCSAPSRGAGAVRVDVSNNGVDWSATGGR-YEYEVTDGVWSVSPSRGPVSGGTPILVSVGGSAKAYSGVYCVFG-TTEVAATALSGGGYSCTAPSGVSAGGVSVRVVEGSGRRELSSGLTYEYYTDAAVVGLLPSTGMISGGTMVSVFGTSF-SGSSVECRFGTSVVRG 255
BLAST of mRNA_M-pyrifera_M_contig86442.20127.1 vs. uniprot
Match: D7FLK0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK0_ECTSI) HSP 1 Score: 103 bits (257), Expect = 9.490e-22 Identity = 85/224 (37.95%), Postives = 125/224 (55.80%), Query Frame = 1 Query: 1 FTFISDLTITSLTPSRGPT--GTAVRVSGTGFS-----SGSSLVCRFG--LITTPAQFVSDTEVVCVVPTGVE-GDVDVRVSVNGVDFSSPSPTPFSLSTIPRITSLSPSSGPVSGGTLIDVFGDGFSA--PAVCLFGGSDEVV-GEVSNSTHVSCRSPSWTSAESVGVEVGV-GEEQSQDGAVFRFVPESSISHIAPSSGPIVGGTLVTIHGAGFVDGGALVC 630 +T++ +TIT ++P GP GT VRVSG+GF SG L+CRFG ++T VS + +CV P G V ++VS+NGVD++S T F S + S P +GP SGGT++ V G F +C FG +V G +ST V+C SP ++ + + V G++ + G F+++ ES++ I PSSGP GGT+V + G GFV+ L C Sbjct: 2761 YTYLPPITITGVSPKVGPLSGGTVVRVSGSGFEDAAAGSGKKLLCRFGQSVVTAAVAGVSG-DALCVAPAYQSVGAVSLKVSINGVDYTSDGWT-FYYSPDISVESAWPRAGPESGGTVVTVTGMEFVDIHSIMCEFGSLGTLVPGRWMDSTTVTCVSPPHMPGAAI-LRLSVNGQQFIETGLAFQYLIESTVRAITPSSGPQQGGTVVEVDGTGFVNSTGLSC 2981
BLAST of mRNA_M-pyrifera_M_contig86442.20127.1 vs. uniprot
Match: A0A7S0Z255_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z255_9CRYP) HSP 1 Score: 102 bits (253), Expect = 2.410e-21 Identity = 83/228 (36.40%), Postives = 122/228 (53.51%), Query Frame = 1 Query: 1 FTFISDLTITSLTPSRGPTGTA---VRVSGTGFSSGSSLVCRFGLI-TTPAQFVSDTEVVCVVPTGVEGDVDVRVSVNGVDFSSPSPTPFSLSTIPRITSLSPSSGPVSGGT--LIDVFGDGFSAPAV-CLFGGSDEVVGEVSNSTHVSCRSPSWTSAESVGVEV--GVGEEQSQDGAVFRFVPESSISHIAPSSGPIVGGTLVTIHGAGFVDGGALVCGFGSSVVVG 657 F + + + S+ PSRG +G V V G+ F+ GS L CRFG+ + A + S + V+C P+ G V V VS NGVD+S+ + + S+SPS GPVSGGT L+ V G + V C+FG + EV + SC +PS SA V V V G G + G + + ++++ + PS+G I GGT+V++ G F G ++ C FG+SVV G Sbjct: 196 FVYGASARVISVMPSRGTSGVEGQIVTVIGSDFAHGSDLSCRFGVNGSVSALYESSSLVMCSAPSRGAGAVRVDVSNNGVDWSATGGR-YEYEVTDGVWSVSPSRGPVSGGTPILVSVGGSAKAYSGVYCVFG-TTEVAATALSGGGYSCTAPSGVSAGGVSVRVVEGSGRRELSSGLTYEYYTDAAVVGLLPSTGMISGGTMVSVFGTSF-SGSSVECRFGTSVVRG 420 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86442.20127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86442.20127.1 >prot_M-pyrifera_M_contig86442.20127.1 ID=prot_M-pyrifera_M_contig86442.20127.1|Name=mRNA_M-pyrifera_M_contig86442.20127.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=223bp FTFISDLTITSLTPSRGPTGTAVRVSGTGFSSGSSLVCRFGLITTPAQFVback to top mRNA from alignment at M-pyrifera_M_contig86442:21..689- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86442.20127.1 ID=mRNA_M-pyrifera_M_contig86442.20127.1|Name=mRNA_M-pyrifera_M_contig86442.20127.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=669bp|location=Sequence derived from alignment at M-pyrifera_M_contig86442:21..689- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86442:21..689- >mRNA_M-pyrifera_M_contig86442.20127.1 ID=mRNA_M-pyrifera_M_contig86442.20127.1|Name=mRNA_M-pyrifera_M_contig86442.20127.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1338bp|location=Sequence derived from alignment at M-pyrifera_M_contig86442:21..689- (Macrocystis pyrifera P11B4 male)back to top |