prot_M-pyrifera_M_contig86381.20118.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86381.20118.1
Unique Nameprot_M-pyrifera_M_contig86381.20118.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length242
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86381.20118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13620CarboxypepD_regcoord: 165..236
e-value: 2.2E-12
score: 47.0
NoneNo IPR availableGENE3D2.60.40.1120coord: 165..239
e-value: 5.1E-8
score: 35.0
IPR013784Carbohydrate-binding-like foldSUPERFAMILY49452Starch-binding domain-likecoord: 159..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86381contigM-pyrifera_M_contig86381:108..833 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86381.20118.1mRNA_M-pyrifera_M_contig86381.20118.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86381 108..848 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86381.20118.1 ID=prot_M-pyrifera_M_contig86381.20118.1|Name=mRNA_M-pyrifera_M_contig86381.20118.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=242bp
MGGNQTRTVAIPIYVLKHAPELQILQPTAGQLLGLDESIRVVVQTDWSLS
AAVDNIEFGFDKNGNGLIDKGEAVTPVGFKAAQPINFGNSHRLEVQLPTK
GIDPGPMAVLARAITEFTEPLPGQTPVAPTTPADPKKAAVTAPGGTIAVP
GSTAQQDMVFTTTGTIEGQVVTADGIPRKNATVKLENAGETVSDEQGRFT
FHDVPAGSHEVTAATNQRSGAAKAVVTPGQTVNLKIMIAVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013784Carb-bd-like_fold