mRNA_M-pyrifera_M_contig86369.20114.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86369.20114.1 vs. uniprot
Match: UPI00064495D2 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064495D2) HSP 1 Score: 120 bits (301), Expect = 5.100e-29 Identity = 55/121 (45.45%), Postives = 74/121 (61.16%), Query Frame = 1 Query: 16 WKPLRRLVYFHIHTKTTTEDQDNICAGCAAPFSFGIFSTIRYCEYFGKFFCSRCHDNDTYFIPGRILQRWDLTHYKVSRKALEFLETIYDDPLFDVTSINPALYEHNPDVRRIKVRESGSF 378 W PLRR +YF+I + T + Q N+CAGC+ S G F+T RYCEY GKFFC+ CH+ ++IP RI+ WD Y V+ + FL I PLFD+ +INP LY +N +R +R F Sbjct: 1021 WAPLRRKLYFNIPVQLTIKHQGNMCAGCSRDLS-GYFTTSRYCEYSGKFFCTNCHNKTQWYIPARIITNWDFKQYPVANFSYAFLMDIARVPLFDIATINPRLYRNNQLLRMRNLRRQMYF 1140
BLAST of mRNA_M-pyrifera_M_contig86369.20114.1 vs. uniprot
Match: A0A8J1YBX9_OWEFU (Ofus.G241025 protein n=3 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1YBX9_OWEFU) HSP 1 Score: 114 bits (286), Expect = 4.600e-27 Identity = 51/123 (41.46%), Postives = 69/123 (56.10%), Query Frame = 1 Query: 1 RGPPGWKPLRRLVYFHIHT----KTTTEDQDNICAGCAAPFSFGIFSTIRYCEYFGKFFCSRCHDNDTYFIPGRILQRWDLTHYKVSRKALEFLETIYDDPLFDVTSINPALYEHNPDVRRIK 357 RG W P R + F++H K Q+ CAGC G RYCEY GK+FC CH NDT FIPGRILQ+WD T Y VS + + LE ++ DPLF++ P LY+ + + +++ Sbjct: 374 RGNMEWAPPRAQIIFNVHPPIKRKVVLGKQNFRCAGCGMKVEQGFIKRFRYCEYLGKYFCQCCHSNDTAFIPGRILQKWDFTKYSVSNFSRDLLERMFFDPLFNILDCGPGLYKKSRTLEQVR 496
BLAST of mRNA_M-pyrifera_M_contig86369.20114.1 vs. uniprot
Match: A0A7S4MMK6_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MMK6_9EUKA) HSP 1 Score: 110 bits (275), Expect = 2.160e-26 Identity = 47/122 (38.52%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 16 WKPLRRLVYFHIHTKTTTEDQDNICAGCAAPFSFGI-FSTIRYCEYFGKFFCSRCHDNDTYFIPGRILQRWDLTHYKVSRKALEFLETIYDDPLFDVTSINPALYEHNPDVRRIKVRESGSF 378 W+ +R + + K ++ + C C A G+ FS+IRYC ++GK+FC+ CH+ND+ +P ++Q+WD T +KVS AL+FLE + D+PL+++T INP LY+ +++IKV F Sbjct: 113 WQVVRNQIPLQVMRKKPPKEGER-CPSCKAQLDLGVVFSSIRYCNFYGKYFCTNCHNNDSVVVPAFVVQKWDFTAHKVSICALQFLEKLLDEPLYNITQINPYLYDSISSLKQIKVLRQQLF 233
BLAST of mRNA_M-pyrifera_M_contig86369.20114.1 vs. uniprot
Match: F1A452_DICPU (RUN domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A452_DICPU) HSP 1 Score: 112 bits (281), Expect = 2.510e-26 Identity = 50/113 (44.25%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 19 KPLRRLVYFHIHTKTTTEDQDNICAGCAAPFSFGIFSTIRYCEYFGKFFCSRCHDNDTYFIPGRILQRWDLTHYKVSRKALEFLETIYDDPLFDVTSINPALYEHNPDVRRIK 357 KP +RL +F I T+ + ++QD CAGC + S IF + R C+Y GK+FCS CHD Y+IP RI+ WD Y +++ LEFL+ I ++PL D++++NP+LY +N + RI+ Sbjct: 905 KPRKRL-HFKIQTEYSLKEQDFKCAGCNSDIS-SIFKSSRLCDYSGKYFCSTCHDKSVYYIPSRIIHSWDFKKYPIAKANLEFLKEIEEEPLIDISTLNPSLYINNQTLLRIR 1015
BLAST of mRNA_M-pyrifera_M_contig86369.20114.1 vs. uniprot
Match: A0A8J1USV0_OWEFU (Ofus.G19674 protein (Fragment) n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1USV0_OWEFU) HSP 1 Score: 103 bits (257), Expect = 1.330e-25 Identity = 46/114 (40.35%), Postives = 64/114 (56.14%), Query Frame = 1 Query: 28 RRLVYFHIHT----KTTTEDQDNICAGCAAPFSFGIFSTIRYCEYFGKFFCSRCHDNDTYFIPGRILQRWDLTHYKVSRKALEFLETIYDDPLFDVTSINPALYEHNPDVRRIK 357 R + F++H K Q+ CAGC G RYCEY GK+FC CH NDT FIPGRILQ+WD T Y VS + + LE ++ DPLF++ LY+ + + +++ Sbjct: 1 RAQIIFNVHPPIKRKVVLGKQNFRCAGCGMKVEQGFIKRFRYCEYLGKYFCQCCHSNDTAFIPGRILQKWDFTKYSVSNFSRDLLERMFFDPLFNILDCGQGLYKKSRTLEQVR 114
BLAST of mRNA_M-pyrifera_M_contig86369.20114.1 vs. uniprot
Match: A0A4W3JC49_CALMI (Rubicon like autophagy enhancer n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3JC49_CALMI) HSP 1 Score: 103 bits (258), Expect = 1.200e-24 Identity = 47/126 (37.30%), Postives = 69/126 (54.76%), Query Frame = 1 Query: 1 RGPPGWKPLRRLVYFHIHTKTTTED----QDNICAGCAAPFSFGIFSTIRYCEYFGKFFCSRCHDNDTYFIPGRILQRWDLTHYKVSRKALEFLETIYDDPLFDVTSINPALYEHNPDVRRIKVRE 366 RG W P R + F +H E Q+++CAGC P +RYCEY GK+FC CH ND IP IL +WD + Y V + + L++I++DPLF++ IN AL ++R+ ++E Sbjct: 1 RGTEDWAPPRFQILFFLHPPQKREAVVAAQNSMCAGCGTPIELKYIKKLRYCEYLGKYFCECCHRNDESPIPSHILTKWDFSKYPVCNFSKQLLQSIWNDPLFNIYCINKALLSKVKELRKSGIQE 126
BLAST of mRNA_M-pyrifera_M_contig86369.20114.1 vs. uniprot
Match: A0A7K4M022_9AVES (RUBCL protein (Fragment) n=3 Tax=Tinamidae TaxID=8803 RepID=A0A7K4M022_9AVES) HSP 1 Score: 104 bits (260), Expect = 1.610e-23 Identity = 47/132 (35.61%), Postives = 68/132 (51.52%), Query Frame = 1 Query: 1 RGPPGWKPLRRLVYFHIHTKTTTED----QDNICAGCAAPFSFGIFSTIRYCEYFGKFFCSRCHDNDTYFIPGRILQRWDLTHYKVSRKALEFLETIYDDPLFDVTSINPALYEHNPDVRRIKVRESGSFPL 384 RG GW P R + F+IH + Q+ C GC P +RYC+Y GK+FC CH +IP RIL +WD Y V A L++I+ +P+F+V+ IN ALY ++ R++ + F L Sbjct: 451 RGSSGWAPPRSQIIFNIHPSVKRDAVVAAQNFTCVGCGTPIESKYIRRLRYCDYLGKYFCDCCHSYAQSYIPARILMKWDFKKYYVCNFAKHLLDSIWQNPIFNVSCINKALYTKTKEIDRVRETQEQLFHL 582
BLAST of mRNA_M-pyrifera_M_contig86369.20114.1 vs. uniprot
Match: A0A851NTR7_9GALL (RUBCL protein (Fragment) n=1 Tax=Penelope pileata TaxID=1118817 RepID=A0A851NTR7_9GALL) HSP 1 Score: 104 bits (259), Expect = 2.230e-23 Identity = 48/132 (36.36%), Postives = 68/132 (51.52%), Query Frame = 1 Query: 1 RGPPGWKPLRRLVYFHIHTKTTTED----QDNICAGCAAPFSFGIFSTIRYCEYFGKFFCSRCHDNDTYFIPGRILQRWDLTHYKVSRKALEFLETIYDDPLFDVTSINPALYEHNPDVRRIKVRESGSFPL 384 RG GW P R + F+IH + Q+ C GC P +RYC+Y GK+FC CH IP RIL +WD Y V + L++I+ P+F+V+SIN ALY + +V R++ + F L Sbjct: 509 RGSSGWSPPRSQIIFNIHPSVKRDAVVAAQNFTCVGCGTPIESKYIRRLRYCDYLGKYFCDCCHSYAQSAIPARILMKWDFKKYYVCNFSKRLLDSIWQQPIFNVSSINKALYTKSKEVDRVRETQEQLFHL 640
BLAST of mRNA_M-pyrifera_M_contig86369.20114.1 vs. uniprot
Match: A0A852DCZ1_PASAF (RUBIC protein (Fragment) n=1 Tax=Passerina amoena TaxID=142471 RepID=A0A852DCZ1_PASAF) HSP 1 Score: 104 bits (259), Expect = 2.270e-23 Identity = 48/124 (38.71%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 1 RGPPGWKPLRRLVYFHIHT----KTTTEDQDNICAGCAAPFSFGIFSTIRYCEYFGKFFCSRCHDNDTYFIPGRILQRWDLTHYKVSRKALEFLETIYDDPLFDVTSINPALYEHNPDVRRIKV 360 RG W P R + F++H K Q+ CAGC +RYCEY GK+FC CH+N IP RIL++WD + Y VS + + L I++DPLF+V +INPALY+ + ++++ Sbjct: 665 RGNLEWAPPRPQIIFNVHLAPARKVAVAKQNYRCAGCGIRTDPDYIKRLRYCEYLGKYFCQCCHENAQTVIPSRILRKWDFSKYYVSNFSKDLLSKIWNDPLFNVQAINPALYQKVKALNQVRL 788
BLAST of mRNA_M-pyrifera_M_contig86369.20114.1 vs. uniprot
Match: A0A8C3M8W2_GEOPR (DUF4206 domain-containing protein n=6 Tax=Neognathae TaxID=8825 RepID=A0A8C3M8W2_GEOPR) HSP 1 Score: 101 bits (252), Expect = 3.270e-23 Identity = 46/132 (34.85%), Postives = 67/132 (50.76%), Query Frame = 1 Query: 1 RGPPGWKPLRRLVYFHIHTKTTTED----QDNICAGCAAPFSFGIFSTIRYCEYFGKFFCSRCHDNDTYFIPGRILQRWDLTHYKVSRKALEFLETIYDDPLFDVTSINPALYEHNPDVRRIKVRESGSFPL 384 RG GW P R + F+IH + Q+ C GC P +RYC+Y GK+FC CH IP RIL +WD Y V + L++I+ P+F+V+SIN LY + ++ R++ + F L Sbjct: 79 RGSSGWSPPRSQIIFNIHPSVKRDAVVAAQNFTCVGCGTPIESKYIRRLRYCDYLGKYFCDCCHSYAQSSIPARILSKWDFKKYYVCNFSKHLLDSIWQQPIFNVSSINKTLYTKSKEMDRVREAQEQLFHL 210 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86369.20114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86369.20114.1 >prot_M-pyrifera_M_contig86369.20114.1 ID=prot_M-pyrifera_M_contig86369.20114.1|Name=mRNA_M-pyrifera_M_contig86369.20114.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp RGPPGWKPLRRLVYFHIHTKTTTEDQDNICAGCAAPFSFGIFSTIRYCEYback to top mRNA from alignment at M-pyrifera_M_contig86369:296..848+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86369.20114.1 ID=mRNA_M-pyrifera_M_contig86369.20114.1|Name=mRNA_M-pyrifera_M_contig86369.20114.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=553bp|location=Sequence derived from alignment at M-pyrifera_M_contig86369:296..848+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86369:296..848+ >mRNA_M-pyrifera_M_contig86369.20114.1 ID=mRNA_M-pyrifera_M_contig86369.20114.1|Name=mRNA_M-pyrifera_M_contig86369.20114.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig86369:296..848+ (Macrocystis pyrifera P11B4 male)back to top |