mRNA_M-pyrifera_M_contig86368.20113.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86368.20113.1
Unique NamemRNA_M-pyrifera_M_contig86368.20113.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig86368.20113.1 vs. uniprot
Match: A0A7S4HHB5_9EUKA (Protein-histidine N-methyltransferase n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HHB5_9EUKA)

HSP 1 Score: 116 bits (291), Expect = 2.190e-28
Identity = 55/102 (53.92%), Postives = 73/102 (71.57%), Query Frame = 1 
Query:    4 FTYEEWAWCLGIVMSRQNKVPLGEQGRPQPTLIPFWDLFNHSQGSGEITTFWNHEKQAMESFAMQDFKEGEQAFIHYGYRHNGLLLLYQGFVYEDNAHDCVT 309
            FTYEE+ W +GIVMSRQN VP+   G PQ  LIP WD+ NH +G   +TTF+N E+Q  + FAM+++K+G+Q FI+YG R N +LLLYQGFV+  N +   T
Sbjct:  247 FTYEEYRWAVGIVMSRQNYVPVN--GTPQICLIPLWDMLNHDEGV--MTTFYNQEEQCTQCFAMRNYKKGDQMFIYYGERANAMLLLYQGFVFSANRYRTFT 344
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BLAST of mRNA_M-pyrifera_M_contig86368.20113.1 vs. uniprot
Match: A0A6M2DMW5_9NEOP (Protein-histidine N-methyltransferase n=1 Tax=Xenopsylla cheopis TaxID=163159 RepID=A0A6M2DMW5_9NEOP)

HSP 1 Score: 100 bits (248), Expect = 2.060e-22
Identity = 46/103 (44.66%), Postives = 69/103 (66.99%), Query Frame = 1 
Query:    4 FTYEEWAWCLGIVMSRQNKVPLGEQGRPQPTLIPFWDLFNHSQGSGEITTFWNHEKQAMESFAMQDFKEGEQAFIHYGYRHNGLLLLYQGFVYEDNAHDCVTV 312
            +TYE + W +  VM+RQN VP+GE+G   P LIP WD+ N+  G  +ITT ++ E Q+++  A++D+K G+Q FI+YG R N  LL++ GFV  +N  D V +
Sbjct:  248 WTYELYCWAVSTVMTRQNSVPVGEEGAMVPALIPLWDMANYKDG--QITTDYSIEDQSVQYSALEDYKPGQQIFIYYGERSNAELLIHNGFVCMENTGDVVNL 348
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BLAST of mRNA_M-pyrifera_M_contig86368.20113.1 vs. uniprot
Match: A0A7M7IUH5_NASVI (Protein-histidine N-methyltransferase n=2 Tax=Pteromalinae TaxID=272242 RepID=A0A7M7IUH5_NASVI)

HSP 1 Score: 97.1 bits (240), Expect = 2.380e-21
Identity = 45/99 (45.45%), Postives = 62/99 (62.63%), Query Frame = 1 
Query:    4 FTYEEWAWCLGIVMSRQNKVPLGEQGRPQPTLIPFWDLFNHSQGSGEITTFWNHEKQAMESFAMQDFKEGEQAFIHYGYRHNGLLLLYQGFVYEDNAHD 300
            FTYEE+ W +  +M+RQN +P   Q     +LIP WD+ NHS+G  +ITT +N      E +AM+ FK  +Q FI+YG R N    ++ GFVY DNA+D
Sbjct:  237 FTYEEYRWAVSTIMTRQNVIPSENQSAMVHSLIPMWDMCNHSEG--KITTNFNEISNCCECYAMKSFKTDDQIFIYYGSRTNAEFFVHSGFVYPDNAND 333
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BLAST of mRNA_M-pyrifera_M_contig86368.20113.1 vs. uniprot
Match: UPI0014550D35 (actin-histidine N-methyltransferase-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014550D35)

HSP 1 Score: 94.0 bits (232), Expect = 3.770e-20
Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = 1 
Query:    1 AFTYEEWAWCLGIVMSRQNKVPLGEQGRPQPTLIPFWDLFNHSQGSGEITTFWNHEKQAMESFAMQDFKEGEQAFIHYGYRHNGLLLLYQGFVYEDNAHDCVTV 312
            +FTY+ + W +  VMSRQN++P         +LIP WD+ NH+  +G ITT +N ++++ E  A+ D   GEQ  I YG R N  LLLY GFVY ++A D V +
Sbjct:  237 SFTYDGYRWAVSTVMSRQNQIPSHNGSHLVTSLIPLWDMCNHT--NGVITTSFNLQRESCEGLALHDLSVGEQVCIFYGLRSNAHLLLYSGFVYPESACDSVNI 338
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BLAST of mRNA_M-pyrifera_M_contig86368.20113.1 vs. uniprot
Match: A0A2B4RLG3_STYPI (Protein-histidine N-methyltransferase n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RLG3_STYPI)

HSP 1 Score: 93.2 bits (230), Expect = 5.040e-20
Identity = 44/103 (42.72%), Postives = 67/103 (65.05%), Query Frame = 1 
Query:    4 FTYEEWAWCLGIVMSRQNKVPLGEQGRPQPTLIPFWDLFNHSQGSGEITTFWNHEKQAMESFAMQDFKEGEQAFIHYGYRHNGLLLLYQGFVYEDNAHDCVTV 312
            FT+++  W +  V +RQNK+P    G P   LIP WD+ NH  G+  ITT ++  + + +S +++DF  GE+  I YG R NG LL++ GFV+E+NAHD V++
Sbjct:  151 FTFDDHRWAVSTVTTRQNKIP-STTGEPTLALIPMWDMCNHCNGT--ITTGYDLAEDSCKSMSVRDFHAGEEVCIFYGERSNGDLLVHNGFVFEENAHDKVSI 250
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BLAST of mRNA_M-pyrifera_M_contig86368.20113.1 vs. uniprot
Match: A0A0L0BYY2_LUCCU (Protein-histidine N-methyltransferase n=3 Tax=Lucilia TaxID=7374 RepID=A0A0L0BYY2_LUCCU)

HSP 1 Score: 92.4 bits (228), Expect = 1.190e-19
Identity = 48/109 (44.04%), Postives = 66/109 (60.55%), Query Frame = 1 
Query:    4 FTYEEWAWCLGIVMSRQNKVPLGEQ--GRPQPT----LIPFWDLFNHSQGSGEITTFWNHEKQAMESFAMQDFKEGEQAFIHYGYRHNGLLLLYQGFVYEDNAHDCVTV 312
            F Y+   W +  VM+R+N +P  +   G   P+    LIPFWD+ NH  G+  IT+F+N E Q MES A +DFK+GEQ FIHYG R N  L+ + GF+   N  D V++
Sbjct:  261 FHYDLIRWAVSTVMTRENLIPRSKPLPGEETPSTIAALIPFWDMANHRNGT--ITSFFNVETQEMESKAQEDFKQGEQVFIHYGDRSNAELMTHNGFINAQNPKDYVSI 367
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BLAST of mRNA_M-pyrifera_M_contig86368.20113.1 vs. uniprot
Match: A0A3M6TTB4_POCDA (Protein-histidine N-methyltransferase (Fragment) n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TTB4_POCDA)

HSP 1 Score: 91.7 bits (226), Expect = 2.240e-19
Identity = 44/103 (42.72%), Postives = 66/103 (64.08%), Query Frame = 1 
Query:    4 FTYEEWAWCLGIVMSRQNKVPLGEQGRPQPTLIPFWDLFNHSQGSGEITTFWNHEKQAMESFAMQDFKEGEQAFIHYGYRHNGLLLLYQGFVYEDNAHDCVTV 312
            FT+++  W +  V +RQNK+P    G P   LIP WD+ NH  G+  ITT ++  + + +S +++DF  GEQ  I YG R N  LL++ GFV+E+NAHD V++
Sbjct:  227 FTFDDHRWAVSTVTTRQNKIP-STTGEPTLALIPMWDMCNHCNGT--ITTGYDLAEDSCKSMSVRDFHVGEQVCIFYGERSNADLLVHNGFVFEENAHDKVSI 326
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BLAST of mRNA_M-pyrifera_M_contig86368.20113.1 vs. uniprot
Match: A0A7S3Z7H1_9EUKA (Protein-histidine N-methyltransferase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z7H1_9EUKA)

HSP 1 Score: 91.7 bits (226), Expect = 2.350e-19
Identity = 45/107 (42.06%), Postives = 65/107 (60.75%), Query Frame = 1 
Query:    4 FTYEEWAWCLGIVMSRQNKVPLGEQGRPQP-TLIPFWDLFNHSQGSGEITTFWNHEKQAMESFAMQDFKEGEQAFIHYGYRHNGLLLLYQGFVYEDNAHDCVTVPYS 321
            F+Y ++ W + +VM+RQN++P     + +   LIP WD  N   G  E+TT +N E  A ESF M+D K+G Q +IHYG R N  L L+ GF+ +DN  D V V ++
Sbjct:  292 FSYRDFRWAVSVVMTRQNQIPSTSDPKKRLLVLIPGWDFCNFRDG--ELTTQFNDEVDASESFTMEDVKKGGQVYIHYGNRPNSKLFLFSGFIADDNKSDYVEVVFA 396
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BLAST of mRNA_M-pyrifera_M_contig86368.20113.1 vs. uniprot
Match: A0A6J2X2X5_SITOR (Protein-histidine N-methyltransferase n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2X2X5_SITOR)

HSP 1 Score: 89.4 bits (220), Expect = 1.430e-18
Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 1 
Query:    4 FTYEEWAWCLGIVMSRQNKVPLGEQGRPQPTLIPFWDLFNHSQGSGEITTFWNHEKQAMESFAMQDFKEGEQAFIHYGYRHNGLLLLYQGFVYEDNAHD 300
            F++ E+ W +  VM+RQN +P  +      +LIP WD+ NHS G+  I+T +N +    ES A +DFK GEQ FI YG R N    ++ GFVY +N +D
Sbjct:  260 FSFHEYCWAVSTVMTRQNMIPSEDGSTMINSLIPLWDMCNHSNGT--ISTDYNPQLDRSESLAFRDFKAGEQLFIFYGPRTNSDFFIHNGFVYNENEND 356
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BLAST of mRNA_M-pyrifera_M_contig86368.20113.1 vs. uniprot
Match: A0A7S0GTT6_9EUKA (Protein-histidine N-methyltransferase n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GTT6_9EUKA)

HSP 1 Score: 89.0 bits (219), Expect = 2.000e-18
Identity = 48/109 (44.04%), Postives = 66/109 (60.55%), Query Frame = 1 
Query:    4 FTYEEWAWCLGIVMSRQNKVPLG-EQGRPQPTLIPFWDLFNHSQGSGEITTFWNHEK--QAMESFAMQDFKEGEQAFIHYGYRHNGLLLLYQGFVYEDNAHDCVTVPYS 321
            FT+ ++ W +G+VM+RQN++P   +  +    LIP WD  N   G  E+TT +N E+   A ESF M D KEG Q FI+YG R N  L L+ GFV +D+  D V V +S
Sbjct:  263 FTFRDFRWAVGVVMTRQNRIPSKTDPNKHVLALIPGWDFCNFRDG--ELTTQFNPEEGVDASESFTMHDVKEGNQIFIYYGNRPNSKLFLFSGFVADDHKSDFVEVLFS 369
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86368.20113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A7S4HHB5_9EUKA2.190e-2853.92Protein-histidine N-methyltransferase n=1 Tax=Vann... [more]
A0A6M2DMW5_9NEOP2.060e-2244.66Protein-histidine N-methyltransferase n=1 Tax=Xeno... [more]
A0A7M7IUH5_NASVI2.380e-2145.45Protein-histidine N-methyltransferase n=2 Tax=Pter... [more]
UPI0014550D353.770e-2043.27actin-histidine N-methyltransferase-like n=1 Tax=A... [more]
A0A2B4RLG3_STYPI5.040e-2042.72Protein-histidine N-methyltransferase n=2 Tax=Styl... [more]
A0A0L0BYY2_LUCCU1.190e-1944.04Protein-histidine N-methyltransferase n=3 Tax=Luci... [more]
A0A3M6TTB4_POCDA2.240e-1942.72Protein-histidine N-methyltransferase (Fragment) n... [more]
A0A7S3Z7H1_9EUKA2.350e-1942.06Protein-histidine N-methyltransferase n=1 Tax=Loth... [more]
A0A6J2X2X5_SITOR1.430e-1842.42Protein-histidine N-methyltransferase n=1 Tax=Sito... [more]
A0A7S0GTT6_9EUKA2.000e-1844.04Protein-histidine N-methyltransferase n=2 Tax=Amor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86368contigM-pyrifera_M_contig86368:20..343 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score100.1
Seed ortholog evalue6.5e-19
Seed eggNOG ortholog7955.ENSDARP00000110046
Preferred namesetd3
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K19199
KEGG ReactionR03875,R04866,R04867
KEGG Pathwayko00310,map00310
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000785,GO:0000790,GO:0001558,GO:0003674,GO:0003712,GO:0003713,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008283,GO:0008757,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010452,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016278,GO:0016279,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018024,GO:0018026,GO:0018027,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032259,GO:0034968,GO:0036211,GO:0040008,GO:0042054,GO:0042800,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0046975,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0051568,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0140096,GO:0140110,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SETD3 subfamily
EggNOG OGs38GWP@33154,3BDB6@33208,3CXWT@33213,48316@7711,490RW@7742,49RHZ@7898,KOG1337@1,KOG1337@2759
EC2.1.1.43
COG Functional cat.S
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Exons1
Model size324
Cds size324
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816773.5143895-CDS-M-pyrifera_M_contig86368:19..3431622816773.5143895-CDS-M-pyrifera_M_contig86368:19..343Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86368 20..343 +
1692278170.1314664-CDS-M-pyrifera_M_contig86368:19..3431692278170.1314664-CDS-M-pyrifera_M_contig86368:19..343Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86368 20..343 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86368.20113.1prot_M-pyrifera_M_contig86368.20113.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86368 20..343 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86368.20113.1

>prot_M-pyrifera_M_contig86368.20113.1 ID=prot_M-pyrifera_M_contig86368.20113.1|Name=mRNA_M-pyrifera_M_contig86368.20113.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp
AFTYEEWAWCLGIVMSRQNKVPLGEQGRPQPTLIPFWDLFNHSQGSGEIT
TFWNHEKQAMESFAMQDFKEGEQAFIHYGYRHNGLLLLYQGFVYEDNAHD
CVTVPYSM
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mRNA from alignment at M-pyrifera_M_contig86368:20..343+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86368.20113.1 ID=mRNA_M-pyrifera_M_contig86368.20113.1|Name=mRNA_M-pyrifera_M_contig86368.20113.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=324bp|location=Sequence derived from alignment at M-pyrifera_M_contig86368:20..343+ (Macrocystis pyrifera P11B4 male)
GCCTTCACCTATGAGGAGTGGGCCTGGTGTCTTGGCATCGTCATGTCTCG
TCAGAACAAGGTGCCCCTTGGAGAGCAAGGCCGGCCACAGCCAACTCTCA
TTCCCTTCTGGGATCTCTTCAACCATTCCCAGGGAAGCGGGGAGATCACC
ACCTTCTGGAACCACGAGAAACAGGCGATGGAGTCCTTTGCCATGCAGGA
CTTCAAGGAGGGCGAGCAGGCGTTCATCCACTACGGCTACCGCCACAACG
GCCTCCTCCTCCTCTACCAGGGCTTCGTCTACGAGGACAACGCACACGAC
TGCGTCACTGTGCCTTACAGCATG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86368:20..343+

>mRNA_M-pyrifera_M_contig86368.20113.1 ID=mRNA_M-pyrifera_M_contig86368.20113.1|Name=mRNA_M-pyrifera_M_contig86368.20113.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig86368:20..343+ (Macrocystis pyrifera P11B4 male)
GCCTTCACCTATGAGGAGTGGGCCTGGTGTCTTGGCATCGTCATGTCTCG
TCAGAACAAGGTGCCCCTTGGAGAGCAAGGCCGGCCACAGCCAACTCTCA
TTCCCTTCTGGGATCTCTTCAACCATTCCCAGGGAAGCGGGGAGATCACC
ACCTTCTGGAACCACGAGAAACAGGCGATGGAGTCCTTTGCCATGCAGGA
CTTCAAGGAGGGCGAGCAGGCGTTCATCCACTACGGCTACCGCCACAACG
GCCTCCTCCTCCTCTACCAGGGCTTCGTCTACGAGGACAACGCACACGAC
TGCGTCACTGTGCCTTACAGCATGGCCTTCACCTATGAGGAGTGGGCCTG
GTGTCTTGGCATCGTCATGTCTCGTCAGAACAAGGTGCCCCTTGGAGAGC
AAGGCCGGCCACAGCCAACTCTCATTCCCTTCTGGGATCTCTTCAACCAT
TCCCAGGGAAGCGGGGAGATCACCACCTTCTGGAACCACGAGAAACAGGC
GATGGAGTCCTTTGCCATGCAGGACTTCAAGGAGGGCGAGCAGGCGTTCA
TCCACTACGGCTACCGCCACAACGGCCTCCTCCTCCTCTACCAGGGCTTC
GTCTACGAGGACAACGCACACGACTGCGTCACTGTGCCTTACAGCATG
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