mRNA_M-pyrifera_M_contig109571.2011.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109571.2011.1 vs. uniprot
Match: A0A5A8CE48_CAFRO (Aminotran_5 domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CE48_CAFRO) HSP 1 Score: 137 bits (344), Expect = 1.540e-34 Identity = 80/173 (46.24%), Postives = 98/173 (56.65%), Query Frame = 1
Query: 1 ETLVEAMRKEMPHGCALMVVDSVTSNTALEIDVEVIARVAKEEFGCKQVLVDGAHALGQ---CDVNWDRMKEAGVDWFVTNAHKWFSSPRGLAILCASPTVQPQTRPLTRSHGIRDGFTSSFVWDGCRDYAPILTFPFLASMWKKISSPCLHTPTYTTELLKEAVTLLETSWG 510
E +V +P G L VVD+VTSNTAL + V IA V + + +LVDGAHALG C E+G WFVTN HKW+SSPRGLA + SP Q TRPL SHG GF S FVWDGCRDY+ L+ P +A+ + + Y ELL AV +L +WG
Sbjct: 353 EWVVGLYETHLPAGAGLAVVDAVTSNTALAMPVARIAAVCRRKG--VPLLVDGAHALGSVGGCG------PESGATWFVTNCHKWWSSPRGLAAMWVSPEAQAATRPLVVSHGYGSGFASEFVWDGCRDYSAALSVPAVAAFRRAMGEA--RVARYCRELLSIAVDILVGAWG 515
BLAST of mRNA_M-pyrifera_M_contig109571.2011.1 vs. uniprot
Match: A0A250WTZ4_9CHLO (Aminotran_5 domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WTZ4_9CHLO) HSP 1 Score: 127 bits (319), Expect = 2.520e-31 Identity = 69/169 (40.83%), Postives = 94/169 (55.62%), Query Frame = 1
Query: 1 ETLVEAMRKEMPHGCALMVVDSVTSNTALEIDVEVIARVAKEEFGCKQVLVDGAHALGQCDVNWDRMKEAGVDWFVTNAHKWFSSPRGLAILCASPTVQPQTRPLTRSHGIRDGFTSSFVWDGCRDYAPILTFPFLASMWKKISSPCLHTPTYTTELLKEAVTLLETSW 507
+ ++E + + MP L V D+VTSNTAL + ++ + + K VL+D AHA GQ V+ + E D++V N HKW + PRG A + P Q + RPL SHG GFTS F+WDGCRDYAP L MW+ + T Y LL++AV LL T+W
Sbjct: 207 DQIIEIVAQTMPQNTKLAVFDAVTSNTALVLPMKQLVELCKSRG--IPVLIDAAHAPGQLPVD---LHELNADYYVANCHKWLACPRGSAFMWVHPDRQSKIRPLVISHGSGCGFTSDFIWDGCRDYAPFLGVSSALGMWQALGFDRCRT--YCQNLLRDAVDLLTTAW 368
BLAST of mRNA_M-pyrifera_M_contig109571.2011.1 vs. uniprot
Match: E1Z9I3_CHLVA (Aminotran_5 domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z9I3_CHLVA) HSP 1 Score: 122 bits (306), Expect = 2.950e-30 Identity = 69/180 (38.33%), Postives = 95/180 (52.78%), Query Frame = 1
Query: 1 ETLVEAMRKEMPHGCALMVVDSVTSNTALEIDVEVIARVAKEEFGCKQVLVDGAHALGQCDVNWDRMKEAGVDWFVTNAHKWFSSPRGLAILCASPTVQPQTRPLTRSHGIRD-----------GFTSSFVWDGCRDYAPILTFPFLASMWKKISSPCLHTPTYTTELLKEAVTLLETSW 507
E LV + MP G L V D+VTSNTA+ + ++ + ++ +VLVDGAHALG ++ + D+FVTN HKW +PRG A L P Q RPL SHG + GF S F+WDGCRDYAP+L W+++ + + Y +LL +AV LL +W
Sbjct: 122 EELVAQVAAAMPAGTKLAVFDAVTSNTAIRLPIQQLVQLCHSRG--VEVLVDGAHALGMLPLD---LHALAADYFVTNCHKWLCAPRGSAFLHVQPRHQAHVRPLIISHGKQSPSLARPSAQAVGFVSEFIWDGCRDYAPLLAVSTALRAWRQLGPEAVRS--YQRQLLHQAVALLTQAW 294
BLAST of mRNA_M-pyrifera_M_contig109571.2011.1 vs. uniprot
Match: B8CFQ5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFQ5_THAPS) HSP 1 Score: 123 bits (308), Expect = 1.420e-29 Identity = 67/163 (41.10%), Postives = 94/163 (57.67%), Query Frame = 1
Query: 46 ALMVVDSVTSNTALEIDVEVIARVAKEEFGCKQVLVDGAHALGQCDVNW------DRMKEAGVDWFVTNAHKWFSSPRGLAIL-CASPTVQPQT--RPLTRSHGIRDGFTSSFVWDGCRDYAPILTFPFLASMWKKISSPCLHTPTYTTELLKEAVTLLETSW 507
++++++ +TSNTA+ + + IA AKEE+G V VDGAH L D+N ++ VD ++TNAHKWFSSPRG A+L C SP ++ +P SHG+ DGF S F+WDGCRDYA L+ P +A W + LKE V +L + W
Sbjct: 275 SMIILEHITSNTAIHVPIAAIAHHAKEEYGMV-VAVDGAHGLLGLDLNMPSILSNEQQNNGHVDIYLTNAHKWFSSPRGAALLFCTSPQLRETILRQPAVVSHGVDDGFLSRFLWDGCRDYAAQLSLPVIADFWNSATVNAHQVREQLQNNLKEGVRILVSHW 436
BLAST of mRNA_M-pyrifera_M_contig109571.2011.1 vs. uniprot
Match: A0A6S8EP46_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EP46_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.540e-29 Identity = 58/153 (37.91%), Postives = 86/153 (56.21%), Query Frame = 1
Query: 49 LMVVDSVTSNTALEIDVEVIARVAKEEFGCKQVLVDGAHALGQCDVNWDRMKEAGVDWFVTNAHKWFSSPRGLAILCASPTVQPQTRPLTRSHGIRDGFTSSFVWDGCRDYAPILTFPFLASMWKKISSPCLHTPTYTTELLKEAVTLLETSW 507
L+++D TSNTAL +E +A+ +K +VLVDGAH++ D+++ ++E GVD+FV+N HKW S+P+G L + P SHG G+ S F W GC DY+ L+ PFL W + + Y + LL +A+ LLE W
Sbjct: 14 LVILDHTTSNTALNYPIEKLAKASKRINSNIKVLVDGAHSMLAKDLDFKALEECGVDYFVSNGHKWASTPKGFGFLWVKANLTDSIHPPLISHGHGSGYLSEFSWQGCADYSVPLSIPFLLDFWSAFGTSKVRM--YQSTLLNQAMDLLEAEW 164
BLAST of mRNA_M-pyrifera_M_contig109571.2011.1 vs. uniprot
Match: A0A6S8EKN2_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EKN2_9STRA) HSP 1 Score: 116 bits (290), Expect = 6.170e-29 Identity = 58/153 (37.91%), Postives = 86/153 (56.21%), Query Frame = 1
Query: 49 LMVVDSVTSNTALEIDVEVIARVAKEEFGCKQVLVDGAHALGQCDVNWDRMKEAGVDWFVTNAHKWFSSPRGLAILCASPTVQPQTRPLTRSHGIRDGFTSSFVWDGCRDYAPILTFPFLASMWKKISSPCLHTPTYTTELLKEAVTLLETSW 507
L+++D TSNTAL +E +A+ +K +VLVDGAH++ D+++ ++E GVD+FV+N HKW S+P+G L + P SHG G+ S F W GC DY+ L+ PFL W + + Y + LL +A+ LLE W
Sbjct: 14 LVILDHTTSNTALNYPIEKLAKASKRINSNIKVLVDGAHSMLAKDLDFKALEECGVDYFVSNGHKWASTPKGFGFLWVKANLTDSIHPPLISHGHGSGYLSEFSWQGCADYSVPLSIPFLLDFWSAFGTSKVRM--YQSTLLNQAMDLLEAEW 164
BLAST of mRNA_M-pyrifera_M_contig109571.2011.1 vs. uniprot
Match: A0A2P6TXP3_CHLSO (L-cysteine desulfhydrase 1 isoform X2 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TXP3_CHLSO) HSP 1 Score: 118 bits (295), Expect = 3.160e-28 Identity = 65/170 (38.24%), Postives = 90/170 (52.94%), Query Frame = 1
Query: 1 ETLVEAMRKEMPHGCALMVVDSVTSNTALEIDVEVIARVAKEEFGCKQVLVDGAHALGQCDVNWDRMKEAGVDWFVTNAHKWFSSPRGLAILCASPTVQPQTRPLTRSHGIRDGFTSSFVWDGCRDYAPILTFPFLASMWKKISSPCLHTPTYTTELLKEAVTLLETSWG 510
E LV + +P L V D+VTSNTA+ + + + ++ QVL+DGAHA GQ ++ ++E G D+FV N HKW +PRG A + P Q RPL SHG GF S F+WDGCRDYAP+L +++ + +LL AV L +WG
Sbjct: 167 EELVAQVAAALPANAKLAVFDAVTSNTAIVLPIWELVQLCHSRG--VQVLIDGAHAPGQLPLD---LEELGADYFVANCHKWLCAPRGSAFMHVRPEHQRHVRPLIVSHGYGSGFVSEFIWDGCRDYAPLLAISAALRALRQLGPEAAQA--HQRQLLAAAVDCLVAAWG 329
BLAST of mRNA_M-pyrifera_M_contig109571.2011.1 vs. uniprot
Match: A0A383VII9_TETOB (Aminotran_5 domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VII9_TETOB) HSP 1 Score: 118 bits (296), Expect = 5.280e-28 Identity = 59/141 (41.84%), Postives = 83/141 (58.87%), Query Frame = 1
Query: 1 ETLVEAMRKEMPHGCALMVVDSVTSNTALEIDVEVIARVAKEEFGCKQVLVDGAHALGQCDVNWDRMKEAGVDWFVTNAHKWFSSPRGLAILCASPTVQPQTRPLTRSHGIRDGFTSSFVWDGCRDYAPILTFPFLASMWK 423
E L+E + +P L V D+VTSNTAL + ++ + ++ K+ VL+DGAHALG ++ +++ D+FV+N HKW RG A+L +P Q Q +P SHG GF SSF+WDGCRDYAP+L WK
Sbjct: 232 EQLLELVTDSLPQNAKLAVFDAVTSNTALVLPIKQLVQLCKDRG--VPVLIDGAHALGMLPLD---LQQLNPDFFVSNCHKWLCGARGSAMLYVAPQWQQQVQPPVLSHGAEAGFLSSFIWDGCRDYAPLLAITTAIQWWK 367
BLAST of mRNA_M-pyrifera_M_contig109571.2011.1 vs. uniprot
Match: A0A7J7QNG2_9CHLO (Aminotran_5 domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QNG2_9CHLO) HSP 1 Score: 114 bits (284), Expect = 2.330e-26 Identity = 58/143 (40.56%), Postives = 83/143 (58.04%), Query Frame = 1
Query: 1 ETLVEAMRKEMPHGCALMVVDSVTSNTALEIDVEVIARVAKEEFGCKQVLVDGAHALGQCDVNWDRMKEAGVDWFVTNAHKWFSSPRGLAILCASPTVQPQTRPLTRSHGIRDGFTSSFVWDGCRDYAPILTFPFLASMWKKI 429
E L+EA+ +P L V D+VTSNTAL + ++ + ++ K VL+DGAHALG ++ +K+ D+FV+N HKW RG A+L +P Q Q +P SHG GF S ++WDGCRDYAP+L W+ +
Sbjct: 231 EQLLEAVAGSLPPTAKLAVFDAVTSNTALVLPIKQLVQLCKGRG--VPVLIDGAHALGMLPLD---LKQLQPDFFVSNCHKWLCGARGSAMLYVAPAWQQQVQPPVLSHGAGAGFLSRYIWDGCRDYAPLLAISTAVQWWRAL 368
BLAST of mRNA_M-pyrifera_M_contig109571.2011.1 vs. uniprot
Match: A0A2P6VQF8_9CHLO (Class V superfamily n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VQF8_9CHLO) HSP 1 Score: 110 bits (276), Expect = 2.490e-25 Identity = 64/168 (38.10%), Postives = 86/168 (51.19%), Query Frame = 1
Query: 7 LVEAMRKEMPHGCALMVVDSVTSNTALEIDVEVIARVAKEEFGCKQVLVDGAHALGQCDVNWDRMKEAGVDWFVTNAHKWFSSPRGLAILCASPTVQPQTRPLTRSHGIRDGFTSSFVWDGCRDYAPILTFPFLASMWKKISSPCLHTPTYTTELLKEAVTLLETSWG 510
LV + +P G V D+VTSNTA+ + + + + + +VL+DGAHALGQ V + + G D+FV N HKW +PRG A L Q PL SHG GF S F+WDGCRDYAP+L W+ + Y LL +A L ++WG
Sbjct: 218 LVSQVAAALPPGARFAVFDAVTSNTAVVLPLAELVTLCQGRG--VEVLIDGAHALGQLPVGLEAL---GADYFVGNCHKWLCAPRGSAFLHVPRGHQAHVHPLIVSHGHGSGFVSEFIWDGCRDYAPLLGISAALRAWQAVG--WAEVRRYQRALLADARGALCSAWG 378 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109571.2011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109571.2011.1 >prot_M-pyrifera_M_contig109571.2011.1 ID=prot_M-pyrifera_M_contig109571.2011.1|Name=mRNA_M-pyrifera_M_contig109571.2011.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=164bp MRKEMPHGCALMVVDSVTSNTALEIDVEVIARVAKEEFGCKQVLVDGAHAback to top mRNA from alignment at M-pyrifera_M_contig109571:90..599+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109571.2011.1 ID=mRNA_M-pyrifera_M_contig109571.2011.1|Name=mRNA_M-pyrifera_M_contig109571.2011.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig109571:90..599+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109571:90..599+ >mRNA_M-pyrifera_M_contig109571.2011.1 ID=mRNA_M-pyrifera_M_contig109571.2011.1|Name=mRNA_M-pyrifera_M_contig109571.2011.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=984bp|location=Sequence derived from alignment at M-pyrifera_M_contig109571:90..599+ (Macrocystis pyrifera P11B4 male)back to top |