prot_M-pyrifera_M_contig86183.20086.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86183.20086.1
Unique Nameprot_M-pyrifera_M_contig86183.20086.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length137
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86183.20086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010617Endosomal/lysomomal potassium channel TMEM175PFAMPF06736DUF1211coord: 3..100
e-value: 4.9E-7
score: 30.1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..136
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..137
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 65..83
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
NoneNo IPR availableTMHMMTMhelixcoord: 48..70
NoneNo IPR availableTMHMMTMhelixcoord: 85..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86183contigM-pyrifera_M_contig86183:3..413 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86183.20086.1mRNA_M-pyrifera_M_contig86183.20086.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86183 3..413 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86183.20086.1 ID=prot_M-pyrifera_M_contig86183.20086.1|Name=mRNA_M-pyrifera_M_contig86183.20086.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp
VSVADAVLSIIATLVLLDVGLPVLRDEGESPGGSNEDMYRYFALTRPEIV
GSLFAAADIGIFWLVHSELLEDASQVGLDFSQGLLFAVHVILLALLSLLP
FFLSLFTALPNASVPQLLFGALLSLAAAIYLAVHLWI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010617TMEM175