prot_M-pyrifera_M_contig86173.20085.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86173.20085.1
Unique Nameprot_M-pyrifera_M_contig86173.20085.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length283
Homology
BLAST of mRNA_M-pyrifera_M_contig86173.20085.1 vs. uniprot
Match: A0A6I6A950_9PLAN (RNA polymerase sigma factor n=6 Tax=Gimesia TaxID=1649453 RepID=A0A6I6A950_9PLAN)

HSP 1 Score: 531 bits (1367), Expect = 8.730e-188
Identity = 278/283 (98.23%), Postives = 282/283 (99.65%), Query Frame = 0
Query:    1 RVFATLIRLLGDFDLAEEAMHDAFTAAVVQWEETGIPDQPRAWLVSTGRFKAIDSLRRRARFDEAQQEVVQRLEGVATQNADRSEQDVEDDRLRLIFTCCHPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDANIPYVIPERSELPERLDAVLTVVYLVFNEGYAASSGDTLTRRDLSEEAIRLGRLLAELLDDTEVMGLLALMLLHESRRESRTTAEGDLILLEDQDRSLWDREKIREGIALVERAIASGEVGSYTIQSAISAVH 283
            RVFATLIRLLGDFDLAEEAMHDAFTAAVVQWEETGIPDQPRAWLVSTGRFKAIDSLRRRARFDEAQQEVVQRLEGVATQNADRSEQDVEDDRLRLIFTCCHPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDANIPYVIPERSELPERLDAVLTVVYLVFNEGYAASSGD+LTRRDLSEEAIRLGRLLAELLDDTEVMGLLALMLLHESRR++RTTAEGDLILLEDQDRSLWDREKIREGIALVERAIASGEVGSY IQ+AISAVH
Sbjct:   23 RVFATLIRLLGDFDLAEEAMHDAFTAAVVQWEETGIPDQPRAWLVSTGRFKAIDSLRRRARFDEAQQEVVQRLEGVATQNADRSEQDVEDDRLRLIFTCCHPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDANIPYVIPERSELPERLDAVLTVVYLVFNEGYAASSGDSLTRRDLSEEAIRLGRLLAELLDDTEVMGLLALMLLHESRRKARTTAEGDLILLEDQDRSLWDREKIREGIALVERAIASGEVGSYAIQAAISAVH 305          
BLAST of mRNA_M-pyrifera_M_contig86173.20085.1 vs. uniprot
Match: A0A812PB54_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812PB54_SYMMI)

HSP 1 Score: 533 bits (1374), Expect = 1.010e-184
Identity = 280/283 (98.94%), Postives = 282/283 (99.65%), Query Frame = 0
Query:    1 RVFATLIRLLGDFDLAEEAMHDAFTAAVVQWEETGIPDQPRAWLVSTGRFKAIDSLRRRARFDEAQQEVVQRLEGVATQNADRSEQDVEDDRLRLIFTCCHPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDANIPYVIPERSELPERLDAVLTVVYLVFNEGYAASSGDTLTRRDLSEEAIRLGRLLAELLDDTEVMGLLALMLLHESRRESRTTAEGDLILLEDQDRSLWDREKIREGIALVERAIASGEVGSYTIQSAISAVH 283
            RVFATLIRLLGDFDLAEEAMHDAFTAAVVQWEETGIPDQPRAWLVSTGRFKAIDSLRRRARFDEAQQEVVQRLEGVATQNADRSEQDVEDDRLRLIFTCCHPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDANIPYVIPERSELPERLDAVLTVVYLVFNEGYAASSGD+LTRRDLSEEAIRLGRLLAELLDDTEVMGLLALMLLHESRRESRTTAEGDLILLEDQDRSLWDREKIREGIALVERAIASGEVGSY IQ+AISAVH
Sbjct:  306 RVFATLIRLLGDFDLAEEAMHDAFTAAVVQWEETGIPDQPRAWLVSTGRFKAIDSLRRRARFDEAQQEVVQRLEGVATQNADRSEQDVEDDRLRLIFTCCHPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDANIPYVIPERSELPERLDAVLTVVYLVFNEGYAASSGDSLTRRDLSEEAIRLGRLLAELLDDTEVMGLLALMLLHESRRESRTTAEGDLILLEDQDRSLWDREKIREGIALVERAIASGEVGSYAIQAAISAVH 588          
BLAST of mRNA_M-pyrifera_M_contig86173.20085.1 vs. uniprot
Match: A0A518A2Y3_9PLAN (Putative ECF RNA polymerase sigma factor SigI n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A2Y3_9PLAN)

HSP 1 Score: 487 bits (1254), Expect = 1.300e-170
Identity = 250/283 (88.34%), Postives = 268/283 (94.70%), Query Frame = 0
Query:    1 RVFATLIRLLGDFDLAEEAMHDAFTAAVVQWEETGIPDQPRAWLVSTGRFKAIDSLRRRARFDEAQQEVVQRLEGVATQNADRSEQDVEDDRLRLIFTCCHPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDANIPYVIPERSELPERLDAVLTVVYLVFNEGYAASSGDTLTRRDLSEEAIRLGRLLAELLDDTEVMGLLALMLLHESRRESRTTAEGDLILLEDQDRSLWDREKIREGIALVERAIASGEVGSYTIQSAISAVH 283
            RVFATL+RLLGDFDLAEEA+H+AF AAV QW+ETGIPDQPRAWLVSTGRFKAIDS+RR ARF+EAQQEV +RLE VA QNADRS+QDVEDDRLRLIFTCCHPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDA IPYVIP R ELPERL+AVLTVVYLVFNEGY+ASSGD+LTRRDLSEEAIRLGRLL ELLDD EV GLLALMLLHESRRE+RTT +GDLILLEDQDR LWD+EKIREG ALV++AIASGEVGSYT+Q+AISAVH
Sbjct:   23 RVFATLVRLLGDFDLAEEALHEAFAAAVAQWQETGIPDQPRAWLVSTGRFKAIDSIRRHARFNEAQQEVAERLERVAVQNADRSDQDVEDDRLRLIFTCCHPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDAGIPYVIPNRDELPERLEAVLTVVYLVFNEGYSASSGDSLTRRDLSEEAIRLGRLLGELLDDAEVTGLLALMLLHESRREARTTVDGDLILLEDQDRRLWDQEKIREGTALVQQAIASGEVGSYTLQAAISAVH 305          
BLAST of mRNA_M-pyrifera_M_contig86173.20085.1 vs. uniprot
Match: A0A2E2CDL5_9PLAN (RNA polymerase subunit sigma-24 n=12 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2CDL5_9PLAN)

HSP 1 Score: 460 bits (1183), Expect = 8.110e-160
Identity = 234/283 (82.69%), Postives = 261/283 (92.23%), Query Frame = 0
Query:    1 RVFATLIRLLGDFDLAEEAMHDAFTAAVVQWEETGIPDQPRAWLVSTGRFKAIDSLRRRARFDEAQQEVVQRLEGVATQNADRSEQDVEDDRLRLIFTCCHPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDANIPYVIPERSELPERLDAVLTVVYLVFNEGYAASSGDTLTRRDLSEEAIRLGRLLAELLDDTEVMGLLALMLLHESRRESRTTAEGDLILLEDQDRSLWDREKIREGIALVERAIASGEVGSYTIQSAISAVH 283
            RVFATLIRL+GDFDLAEEAMH+AF AAV QW   GIP  PR+WLVSTGRFKAID +RRR RFDEAQ EV QRLE +A  NAD+S+ +VEDDRLRLIFTCCHPAIAPQVQ+PLTLREVCGLTTEEIASAFLTSP+TMAQRIVRGK+KIRDA IPYV+P+R++LPERLDAVLTVVYLVFNEGY+ASSGD+LTR+DLSEEAIRLGRLL  LLDD EV GLLALML+HESRRE+R+TA GDLILLEDQDRSLWD++KIREG ALVE+AIASGEVGSYTIQ+AI++VH
Sbjct:   23 RVFATLIRLIGDFDLAEEAMHEAFAAAVEQWHRDGIPANPRSWLVSTGRFKAIDHIRRRVRFDEAQLEVAQRLESIAGLNADKSDSEVEDDRLRLIFTCCHPAIAPQVQIPLTLREVCGLTTEEIASAFLTSPATMAQRIVRGKSKIRDAGIPYVVPDRADLPERLDAVLTVVYLVFNEGYSASSGDSLTRKDLSEEAIRLGRLLLGLLDDPEVKGLLALMLIHESRREARSTANGDLILLEDQDRSLWDQDKIREGTALVEQAIASGEVGSYTIQAAIASVH 305          
BLAST of mRNA_M-pyrifera_M_contig86173.20085.1 vs. uniprot
Match: A0A517RC64_9PLAN (RNA polymerase sigma factor n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RC64_9PLAN)

HSP 1 Score: 441 bits (1134), Expect = 2.260e-152
Identity = 222/283 (78.45%), Postives = 256/283 (90.46%), Query Frame = 0
Query:    1 RVFATLIRLLGDFDLAEEAMHDAFTAAVVQWEETGIPDQPRAWLVSTGRFKAIDSLRRRARFDEAQQEVVQRLEGVATQNADRSEQDVEDDRLRLIFTCCHPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDANIPYVIPERSELPERLDAVLTVVYLVFNEGYAASSGDTLTRRDLSEEAIRLGRLLAELLDDTEVMGLLALMLLHESRRESRTTAEGDLILLEDQDRSLWDREKIREGIALVERAIASGEVGSYTIQSAISAVH 283
            RV+ATL+RLLGDFDLAEEA+H+AFTAA+ QWE  GIP  P +WLVSTGRFKAID++RRR R+D++Q+E++ RLEG+A  NAD+ + +VEDDRLRLIFTCCHPAIAP +QV LTLREVCGLTTEEIASAFLTSPSTMAQRIVRGK+KIR+A IPYV+P   +LPERLDAVLTV+YLVFNEGY+ASSGDTLTR DLSEEAIRL RLL ELL D E +GLLALMLLHESRRE+R T++G+LILLEDQDR LWDR+KIREGI+LVERAI SGEVGSYTIQ+AI+AVH
Sbjct:   23 RVYATLVRLLGDFDLAEEALHEAFTAAMEQWERDGIPANPVSWLVSTGRFKAIDTIRRRTRYDQSQEELITRLEGIAELNADKLDTEVEDDRLRLIFTCCHPAIAPNIQVALTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKSKIREAGIPYVVPTHVDLPERLDAVLTVIYLVFNEGYSASSGDTLTRGDLSEEAIRLARLLIELLPDPEAIGLLALMLLHESRREARATSDGELILLEDQDRRLWDRDKIREGISLVERAIGSGEVGSYTIQAAIAAVH 305          
BLAST of mRNA_M-pyrifera_M_contig86173.20085.1 vs. uniprot
Match: A0A518I8R9_9PLAN (RNA polymerase sigma factor n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I8R9_9PLAN)

HSP 1 Score: 438 bits (1127), Expect = 2.710e-151
Identity = 220/283 (77.74%), Postives = 256/283 (90.46%), Query Frame = 0
Query:    1 RVFATLIRLLGDFDLAEEAMHDAFTAAVVQWEETGIPDQPRAWLVSTGRFKAIDSLRRRARFDEAQQEVVQRLEGVATQNADRSEQDVEDDRLRLIFTCCHPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDANIPYVIPERSELPERLDAVLTVVYLVFNEGYAASSGDTLTRRDLSEEAIRLGRLLAELLDDTEVMGLLALMLLHESRRESRTTAEGDLILLEDQDRSLWDREKIREGIALVERAIASGEVGSYTIQSAISAVH 283
            RVFA+L+RLLGDFDLAEEA+H+AFTAAV QW+  GIPD P +WLVS GRFKAID++RRR R+D +Q+E+  RLEG+A  NA++S+ +VEDDRLRLIFTCCHPAIA Q+QVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIR+A IPYVIP R++LPERLDAVLTV+YLVFNEGY+ASSGD+LTR+DLSEEAIRLGRLL ELL D E +GLLALMLL ESRRE+R T+ G+LILLEDQDR LWD+ KIREGI+LVERAIA+GEVG YT+Q+AI++ H
Sbjct:   23 RVFASLVRLLGDFDLAEEALHEAFTAAVEQWQRDGIPDNPVSWLVSAGRFKAIDTIRRRTRYDRSQEELTTRLEGIAEANAEKSDTEVEDDRLRLIFTCCHPAIAAQIQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIREAGIPYVIPTRADLPERLDAVLTVIYLVFNEGYSASSGDSLTRQDLSEEAIRLGRLLVELLPDAEALGLLALMLLQESRREARATSMGELILLEDQDRRLWDQAKIREGISLVERAIATGEVGGYTVQAAIASEH 305          
BLAST of mRNA_M-pyrifera_M_contig86173.20085.1 vs. uniprot
Match: A0A2E0SH57_9PLAN (RNA polymerase subunit sigma-24 n=1 Tax=Planctomyces sp. TaxID=37635 RepID=A0A2E0SH57_9PLAN)

HSP 1 Score: 409 bits (1050), Expect = 1.020e-139
Identity = 209/283 (73.85%), Postives = 240/283 (84.81%), Query Frame = 0
Query:    1 RVFATLIRLLGDFDLAEEAMHDAFTAAVVQWEETGIPDQPRAWLVSTGRFKAIDSLRRRARFDEAQQEVVQRLEGVATQNADRSEQDVEDDRLRLIFTCCHPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDANIPYVIPERSELPERLDAVLTVVYLVFNEGYAASSGDTLTRRDLSEEAIRLGRLLAELLDDTEVMGLLALMLLHESRRESRTTAEGDLILLEDQDRSLWDREKIREGIALVERAIASGEVGSYTIQSAISAVH 283
            RV ATLIRLLGDFDLAEEA+ +AFTAA  QW+  GIPD PRAWLVSTGRFKA+D +RRRA F + Q  +  R+E +A  NAD +E+ ++DD+LRLIFTCCHPAI P+VQVPLTLREVCGLTTEEIASAFLT+P+ MAQRIVRGKAKIRDA IPYVIP  ++LPER+DAVL V+YLVFNEGY+AS+G T TR DLS EAIRLGRL+ ELL D EVMGLLALMLLHESRR +R + EGD+ILLEDQDRS W+RE IREG  LV+RA A+G VG YTIQ+AISAVH
Sbjct:   20 RVLATLIRLLGDFDLAEEALQEAFTAAAEQWQHEGIPDNPRAWLVSTGRFKAVDLVRRRASFQKMQPAIAARVEAIADHNADLAERQIKDDQLRLIFTCCHPAIDPKVQVPLTLREVCGLTTEEIASAFLTAPAAMAQRIVRGKAKIRDAGIPYVIPSEADLPERIDAVLAVIYLVFNEGYSASTGTTHTRPDLSNEAIRLGRLMLELLPDPEVMGLLALMLLHESRRAARLSPEGDIILLEDQDRSRWNRELIREGQQLVQRAFAAGNVGPYTIQAAISAVH 302          
BLAST of mRNA_M-pyrifera_M_contig86173.20085.1 vs. uniprot
Match: UPI00141DA3C8 (RNA polymerase sigma factor n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI00141DA3C8)

HSP 1 Score: 404 bits (1039), Expect = 4.440e-138
Identity = 205/283 (72.44%), Postives = 240/283 (84.81%), Query Frame = 0
Query:    1 RVFATLIRLLGDFDLAEEAMHDAFTAAVVQWEETGIPDQPRAWLVSTGRFKAIDSLRRRARFDEAQQEVVQRLEGVATQNADRSEQDVEDDRLRLIFTCCHPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDANIPYVIPERSELPERLDAVLTVVYLVFNEGYAASSGDTLTRRDLSEEAIRLGRLLAELLDDTEVMGLLALMLLHESRRESRTTAEGDLILLEDQDRSLWDREKIREGIALVERAIASGEVGSYTIQSAISAVH 283
            RVFATL+RLL DFDLAEEAMH+AF +AV QW+  GIP  PRAWL+STGRFKAID++RR +RF E Q+EV+ RLE ++  N  R EQD+EDDRLRLIFTCCHPAI P+VQVPLTLREVCGLTTEEIA AFL  P+TMAQRIVRGKAKIRDA IP+VIP  ++LP+RLDAVL V+YL FNEGY+AS+G +LTR DLS EAIRL RL++ELL D EV+GLLALMLLHESRR +R + +GD+ILLEDQDRS WD+E I EG  LVER++ SG +G YTIQ+AISAVH
Sbjct:   18 RVFATLVRLLNDFDLAEEAMHEAFASAVDQWQRDGIPANPRAWLISTGRFKAIDAIRRHSRFAERQREVLARLEDISDANRQREEQDIEDDRLRLIFTCCHPAIDPKVQVPLTLREVCGLTTEEIAHAFLVPPATMAQRIVRGKAKIRDAGIPFVIPSHADLPDRLDAVLAVIYLFFNEGYSASAGASLTRSDLSSEAIRLARLISELLPDPEVIGLLALMLLHESRRTARMSDQGDIILLEDQDRSQWDQELIAEGQQLVERSLRSGRIGVYTIQAAISAVH 300          
BLAST of mRNA_M-pyrifera_M_contig86173.20085.1 vs. uniprot
Match: A0A518IYH0_9BACT (Putative ECF RNA polymerase sigma factor SigI n=4 Tax=Rosistilla TaxID=2795779 RepID=A0A518IYH0_9BACT)

HSP 1 Score: 405 bits (1040), Expect = 6.110e-138
Identity = 204/282 (72.34%), Postives = 243/282 (86.17%), Query Frame = 0
Query:    2 VFATLIRLLGDFDLAEEAMHDAFTAAVVQWEETGIPDQPRAWLVSTGRFKAIDSLRRRARFDEAQQEVVQRLEGVATQNADRSEQDVEDDRLRLIFTCCHPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDANIPYVIPERSELPERLDAVLTVVYLVFNEGYAASSGDTLTRRDLSEEAIRLGRLLAELLDDTEVMGLLALMLLHESRRESRTTAEGDLILLEDQDRSLWDREKIREGIALVERAIASGEVGSYTIQSAISAVH 283
            VFATL+RL+GDFDLAEEA+H+AF AA+ +W++ GIP  PR+WLVS+GRFKAID +RRRARF  A  E+ QR+E +A  NA  SE++++DDRLRLIFTCCHPAI P+VQVPLTLREVCGLTTEEIASAFL SPSTMAQRIVRGKAKIRDA IP+V+P  +ELPERLDAVL+VVYLVFNEGY+AS+G++LTR DLS+EAIRL RL+ ELL D E MGLLA+MLLHESRR++R T +GDL+LLEDQDRSLWDR+ I EG   V+R++ S  VG Y IQ+AISAVH
Sbjct:   39 VFATLVRLIGDFDLAEEALHEAFIAALEKWQQQGIPADPRSWLVSSGRFKAIDVIRRRARFHRAADELAQRIEEIAAANASVSEREIQDDRLRLIFTCCHPAIDPKVQVPLTLREVCGLTTEEIASAFLASPSTMAQRIVRGKAKIRDAKIPFVVPSLTELPERLDAVLSVVYLVFNEGYSASTGESLTRPDLSQEAIRLSRLIVELLPDPEAMGLLAMMLLHESRRQARLTPDGDLVLLEDQDRSLWDRDLIDEGKLWVQRSLESRRVGGYAIQAAISAVH 320          
BLAST of mRNA_M-pyrifera_M_contig86173.20085.1 vs. uniprot
Match: A0A517W0L0_9PLAN (ECF RNA polymerase sigma factor SigE n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W0L0_9PLAN)

HSP 1 Score: 403 bits (1035), Expect = 1.920e-137
Identity = 204/283 (72.08%), Postives = 247/283 (87.28%), Query Frame = 0
Query:    1 RVFATLIRLLGDFDLAEEAMHDAFTAAVVQWEETGIPDQPRAWLVSTGRFKAIDSLRRRARFDEAQQEVVQRLEGVATQNADRSEQDVEDDRLRLIFTCCHPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDANIPYVIPERSELPERLDAVLTVVYLVFNEGYAASSGDTLTRRDLSEEAIRLGRLLAELLDDTEVMGLLALMLLHESRRESRTTAEGDLILLEDQDRSLWDREKIREGIALVERAIASGEVGSYTIQSAISAVH 283
            RVFATLIRLLGDFDLAEEAMH+AFTAAV QW+  GIP  PRAWLVSTGRFKAIDS+RRR+RFD + +E+ +RLE +A   A+++ Q+VEDDRLRLIFTCCHP+++P++QV LTLREVCGL TEEIASAFL +P T+AQRIVR KAKIRDA IPY +P  +ELP RLDAVL+V+YLVFNEGY+ASSG++L R DLSEEAIRLGRLL +LL D+EVMGLLALMLL ESRR++R T++GD+ILLEDQDRSLW+R++I EG  LV R++AS + G YTIQ+AI++VH
Sbjct:   23 RVFATLIRLLGDFDLAEEAMHEAFTAAVEQWQCDGIPRNPRAWLVSTGRFKAIDSVRRRSRFDASLEELARRLEEIADDKAEKANQEVEDDRLRLIFTCCHPSLSPELQVALTLREVCGLKTEEIASAFLITPPTLAQRIVRAKAKIRDAGIPYEVPSLAELPTRLDAVLSVIYLVFNEGYSASSGESLIRIDLSEEAIRLGRLLLDLLPDSEVMGLLALMLLQESRRDARATSDGDVILLEDQDRSLWNRQQISEGTTLVNRSVASRDYGIYTIQAAIASVH 305          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86173.20085.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I6A950_9PLAN8.730e-18898.23RNA polymerase sigma factor n=6 Tax=Gimesia TaxID=... [more]
A0A812PB54_SYMMI1.010e-18498.94Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A518A2Y3_9PLAN1.300e-17088.34Putative ECF RNA polymerase sigma factor SigI n=3 ... [more]
A0A2E2CDL5_9PLAN8.110e-16082.69RNA polymerase subunit sigma-24 n=12 Tax=Planctomy... [more]
A0A517RC64_9PLAN2.260e-15278.45RNA polymerase sigma factor n=1 Tax=Gimesia alba T... [more]
A0A518I8R9_9PLAN2.710e-15177.74RNA polymerase sigma factor n=1 Tax=Gimesia fumaro... [more]
A0A2E0SH57_9PLAN1.020e-13973.85RNA polymerase subunit sigma-24 n=1 Tax=Planctomyc... [more]
UPI00141DA3C84.440e-13872.44RNA polymerase sigma factor n=1 Tax=Rubinisphaera ... [more]
A0A518IYH0_9BACT6.110e-13872.34Putative ECF RNA polymerase sigma factor SigI n=4 ... [more]
A0A517W0L0_9PLAN1.920e-13772.08ECF RNA polymerase sigma factor SigE n=2 Tax=Gimes... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 103..151
e-value: 1.9E-5
score: 26.2
IPR013249RNA polymerase sigma factor 70, region 4 type 2PFAMPF08281Sigma70_r4_2coord: 97..147
e-value: 9.8E-8
score: 31.6
IPR007627RNA polymerase sigma-70 region 2PFAMPF04542Sigma70_r2coord: 2..61
e-value: 8.8E-7
score: 28.6
NoneNo IPR availablePANTHERPTHR47756FAMILY NOT NAMEDcoord: 1..283
NoneNo IPR availablePANTHERPTHR47756:SF2coord: 1..283
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 88..149
IPR013325RNA polymerase sigma factor, region 2SUPERFAMILY88946Sigma2 domain of RNA polymerase sigma factorscoord: 1..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86173contigM-pyrifera_M_contig86173:2..850 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86173.20085.1mRNA_M-pyrifera_M_contig86173.20085.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86173 2..850 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86173.20085.1 ID=prot_M-pyrifera_M_contig86173.20085.1|Name=mRNA_M-pyrifera_M_contig86173.20085.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=283bp
RVFATLIRLLGDFDLAEEAMHDAFTAAVVQWEETGIPDQPRAWLVSTGRF
KAIDSLRRRARFDEAQQEVVQRLEGVATQNADRSEQDVEDDRLRLIFTCC
HPAIAPQVQVPLTLREVCGLTTEEIASAFLTSPSTMAQRIVRGKAKIRDA
NIPYVIPERSELPERLDAVLTVVYLVFNEGYAASSGDTLTRRDLSEEAIR
LGRLLAELLDDTEVMGLLALMLLHESRRESRTTAEGDLILLEDQDRSLWD
REKIREGIALVERAIASGEVGSYTIQSAISAVH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR013249RNA_pol_sigma70_r4_t2
IPR007627RNA_pol_sigma70_r2
IPR013324RNA_pol_sigma_r3/r4-like
IPR013325RNA_pol_sigma_r2