mRNA_M-pyrifera_M_contig86161.20078.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86161.20078.1 vs. uniprot
Match: A0A4P9W060_9FUNG (Importin subunit alpha n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W060_9FUNG) HSP 1 Score: 128 bits (321), Expect = 1.900e-30 Identity = 75/251 (29.88%), Postives = 133/251 (52.99%), Query Frame = 1 Query: 1 LEPLLHLATNSTS-LELRRNATWAVSNLFRGK-PPPLLAMVLPYLPAVCALAKSDDNPIVSDALWCLAYFCDGGEERLVHMLRTNVLPVVLQRVASNSEQVHAPAMRIVGSVATGPDYLVEALLNMGALHALTQLLSLRPRQNVRKELFFTLSNITAGWLPHVRLFLDSPLAPHTVAAANQEDSEVALQALWTLANATTNFETDTKLLGVLLEQGVVDTLYTNISRQDLKAKMVCLEGFCNCVQAAGQSEK 747 L PLL++ +T+ L + RNATW +SN RGK PPP +M+ P LP + L + D +++DA W ++Y DG +++ ++ V +++ + + V PA+R VG++ TG D + ++N GAL AL LL+ P+ +RKE +T+SNITAG ++ +D+ + P + + D + ++ + L++QG + L ++ D + V L+G N ++ G+S+K Sbjct: 201 LRPLLNILNENTNKLSMLRNATWTLSNFCRGKNPPPEWSMISPALPVLAKLIYASDEEVLTDACWAISYLSDGSNDKIQAVIEAGVCRRLVELLMHQAFAVQTPALRSVGNIVTGDDLQTQVIINCGALGALLSLLTTSPKDGIRKEACWTISNITAGNAAQIQCVIDANIIPPLILILQRGDFKTKXXXXXXXXXXXXXGLSNPIQIKYLVQQGCIKPLCDLLNCGDNRIIQVALDGLENILKV-GESDK 450
BLAST of mRNA_M-pyrifera_M_contig86161.20078.1 vs. uniprot
Match: UPI000A29DDEF (importin subunit alpha-5 n=1 Tax=Arabidopsis lyrata subsp. lyrata TaxID=81972 RepID=UPI000A29DDEF) HSP 1 Score: 118 bits (295), Expect = 7.040e-27 Identity = 72/248 (29.03%), Postives = 120/248 (48.39%), Query Frame = 1 Query: 7 PLLHLATNSTSLELRRNATWAVSNLFRGKPPPLLAMVLPYLPAVCALAKSDDNPIVSDALWCLAYFCDGGEERLVHMLRTNVLPVVLQRVASNSEQVHAPAMRIVGSVATGPDYLVEALLNMGALHALTQLLSLRPRQNVRKELFFTLSNITAGWLPHVRLFLDSPLAPHTVAAANQEDSEVALQALWTLANATTNFETDTKLLGVLLEQGVVDTLYTNISRQDLKAKMVCLEGFCNCVQAAGQSEKN 750 PLLH +L + RNATW +SN FRG P PL +V P LP + L SDD ++SDA W + D +E + ++ V+P +++ + S V PA+R +G++ +G + ++N GAL L LL+ + + +R+E +T V A + ++ +A+W ++NAT + + L+EQ + L + DL+ +V L+G + AG+ EKN Sbjct: 201 PLLHQLNEPATLSILRNATWTLSNFFRGNPSPLFDLVKPALPVLKRLVHSDDEQVLSDACWAFSNLSDCSDENIQSVIEAGVVPRLVELLQHPSPVVLVPALRTIGNIVSGNSLQTQCVINCGALPVLADLLTQKYTRGIRRESCWTXXXXXXXXXXXXXXXXXXXXXXXXVNLAQHAEFDIKKEAVWAISNATGCGSPNQ--IKYLVEQNCLKALCDILVCSDLRIILVSLDGL-EMILMAGEVEKN 445
BLAST of mRNA_M-pyrifera_M_contig86161.20078.1 vs. uniprot
Match: UPI001D03B7AE (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001D03B7AE) HSP 1 Score: 117 bits (292), Expect = 2.890e-26 Identity = 66/195 (33.85%), Postives = 106/195 (54.36%), Query Frame = 1 Query: 10 LLH-LATNSTSLELRRNATWAVSNLFRGKPPPLLAMVLPYLPAVCALAKSDDNPIVSDALWCLAYFCDGGEERLVHMLRTNVLPVVLQRVASNSEQVHAPAMRIVGSVATGPDYLVEALLNMGA---LHALTQLLSLRPRQNVRKELFFTLSNITAGWLPHVRLFLDSPLAPHTVAAANQEDSEVALQALWTLAN 582 LLH L +L +RNATWA+SN RGKP P V +P +C L D +++DA W +Y DG ERL + +P +++ V S + PA+R +G++ TG D L +A+L+ + ++ L LL P+Q++RKE +T+SNI AG + ++ +D+ + P + E + V + W L+N Sbjct: 307 LLHELDKPGNTLSFQRNATWALSNFLRGKPVPSFEYVKQCIPTICNLLDEKDEEVLTDACWAASYATDGPMERLQACVDQGFIPRLIKHVKSPYPSIQTPALRTIGNILTGDDTLTQAVLSANSGEVIYCLKSLLD-HPKQSLRKEAMWTISNIAAGTISQIQQLIDAGVVPKIIEKLGDEYT-VQKEGYWGLSN 499
BLAST of mRNA_M-pyrifera_M_contig86161.20078.1 vs. uniprot
Match: A0A7J7D0X0_TRIWF (Importin alpha isoform 1 n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7D0X0_TRIWF) HSP 1 Score: 112 bits (280), Expect = 1.430e-24 Identity = 73/249 (29.32%), Postives = 126/249 (50.60%), Query Frame = 1 Query: 1 LEPLLHLATNSTSLELRRNATWAVSNLFRGKPPPLLAMVLPYLPAVCALAKSDDNPIVSDALWCLAYFCDGGEERLVHMLRTNVLPVVLQRVASNSEQVHAPAMRIVGSVATGPDYLVEALLNMGALHALTQLLSLRPRQNVRKELFFTLSNITAGWLPHVRLFLDSPLAPHTVAAANQEDSEVALQALWTLANATTNFETDTKLLGVLLEQGVVDTLYTNISRQDLKAKMVCLEGFCNCVQAAGQSEK 747 L PLL + L + RNATW +SN FRGKPP V P LP + L +D +++DA W L+Y DG +++ ++ + V P +++ + S V PA+R VG++ TG D + +++ AL L QLL+ +++++KE +T+SNITAG ++ +++ + V + +E + + L+ QG + L + D + VCLEG N ++ G+++K Sbjct: 455 LIPLLGQLNERSKLSMLRNATWTLSNFFRGKPPTPFEQVKPALPILQQLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIDSGVCPRLVELLTHPSPTVLIPALRTVGNIVTGDDAQTQFIIDNKALPCLHQLLTQNHKKSIKKEACWTISNITAGNKGQIQAVIEAGIILPLVHLL--QHAEFDXXXXXXXXXXXXXXXGSHEQIQFLVTQGCIKQLCDLLICPDPRIVTVCLEGLENILKV-GEADK 700
BLAST of mRNA_M-pyrifera_M_contig86161.20078.1 vs. uniprot
Match: A0A6A5C8I6_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5C8I6_NAEFO) HSP 1 Score: 111 bits (278), Expect = 2.110e-24 Identity = 68/239 (28.45%), Postives = 115/239 (48.12%), Query Frame = 1 Query: 7 PLLH--LATNSTSLELRRNATWAVSNLFRGKPPPLLAMVLPYLPAVCALAKSDDNPIVSDALWCLAYFCDGGEERLVHMLRTNVLPVVLQRVASNSEQVHAPAMRIVGSVATGPDYLVEALL--NMGALHALTQLLSLRPRQNVRKELFFTLSNITAGWLPHVRLFLDSPLAPHTVAAANQEDSEVALQALWTLANATTNFETDTKLLGVLLEQGVVDTLYTNISRQDLKAKMVCLEGF 711 PLLH + L ++RNATW +SNL RG P V LP + L D +++DA W Y DG ERL + + +P +++ V S+ + PA+R +G++ TG D L +A+L N G L P+Q++RKE + +SNI AG + ++ +D + + +D V W L+N + + +++ G ++ L + +++ +V LEG Sbjct: 304 PLLHEEIVRPLNRLSIKRNATWTLSNLLRGTPIVSFEYVKQCLPTIDKLLDESDEEVLTDACWAAFYASDGPIERLQACVDQDFIPKIIKHVKSSLAAIQTPALRTLGNIITGDDQLTQAVLSENSGEFVKFLPTLLDHPKQSLRKETMWVISNIAAGNVSQIQQLIDGGIVTKVIEKLKGDDFSVQKDGFWALSNICDCGSVEQ--IAYVVKSGGIEQLIKALHSSEMRVIVVGLEGL 540
BLAST of mRNA_M-pyrifera_M_contig86161.20078.1 vs. uniprot
Match: A0A7S2JAK8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JAK8_9EUKA) HSP 1 Score: 106 bits (264), Expect = 1.210e-23 Identity = 59/144 (40.97%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 40 LELRRNATWAVSNLFRGKPPPLLAMVLPYLPAVCALAK-SDDNPIVSDALWCLAYFCDGGEERLVHMLRTNVLPVVLQRVASNSEQVHAPAMRIVGSVATGPDYLVEALLNMGALHALTQLLSLRPRQNVRKELFFTLSNITAG 468 L++ RNATW +SNL RGKPPP ++ P LP + L + D ++ DA W L+Y C+ ER+ H+L T VLP+++ +A S V PA+R VG+VA G A+L G + + LL ++ ++KE + LSNITAG Sbjct: 153 LQMLRNATWTISNLCRGKPPPRWELIAPALPVLVQLVRVQTDEEVLVDACWALSYACEP-PERICHLLSTGVLPLLVNLLAHTSPNVQTPALRCVGNVAIGSPSETAAVLECGTVVKVEALLH-SEKKEIKKEACWMLSNITAG 294
BLAST of mRNA_M-pyrifera_M_contig86161.20078.1 vs. uniprot
Match: UPI000C87428C (importin subunit alpha-1a-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI000C87428C) HSP 1 Score: 108 bits (271), Expect = 1.420e-23 Identity = 71/250 (28.40%), Postives = 114/250 (45.60%), Query Frame = 1 Query: 1 LEPLLHLATNSTSLELRRNATWAVSNLFRGKPPPLLAMVLPYLPAVCALAKSDDNPIVSDALWCLAYFCDGGEERLVHMLRTNVLPVVLQRVASNSEQVHAPAMRIVGSVATGPDYLVEALLNMGALHALTQLLSLRPRQNVRKELFFTLSNITAGWLPHVRLFLDSPLAPHTVAAANQEDSEVALQALWTLANATTNFETDTKLLGVLLEQGVVDTLYTNISRQDLKAKMVCLEGFCNCVQAAGQSEKN 750 L PLL L + RNATW +SNL RGKPPP P LP + L +D+ I++D W L+Y CDG +++ ++ V P +++ + V PA+R VG++ TG D + +++ AL L LL +++++KE +T+S L P V + + + D + L+ +G + L + D K MVC+EG + AG++EKN Sbjct: 200 LSPLLVQLNERAKLSMVRNATWTLSNLCRGKPPPPYEQTKPALPTLACLIYLNDDEILADTCWSLSYLCDGTSDKVQAVIDAGVCPRLVELLTHPLPTVVIPALRTVGNIVTGDDIQTQHIISQNALPCLLNLLIRDHKKSIKKEACWTISXXXXXXXXXXXXXXXXXLIPPLVHLIKNAEFDXXXXXXXXXXXXSLGGTCDQIMF--LVNEGCIKPLCDLLVCPDPKCVMVCMEGL-ESILKAGEAEKN 446
BLAST of mRNA_M-pyrifera_M_contig86161.20078.1 vs. uniprot
Match: A0A7I8KN30_SPIIN (Importin subunit alpha n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KN30_SPIIN) HSP 1 Score: 108 bits (270), Expect = 1.800e-23 Identity = 64/233 (27.47%), Postives = 122/233 (52.36%), Query Frame = 1 Query: 52 RNATWAVSNLFRGKPPPLLAMVLPYLPAVCALAKSDDNPIVSDALWCLAYFCDGGEERLVHMLRTNVLPVVLQRVASNSEQVHAPAMRIVGSVATGPDYLVEALLNMGALHALTQLLSLRPRQNVRKELFFTLSNITAGWLPHVRLFLDSPLAPHTVAAANQEDSEVALQALWTLANATTNFETDTKLLGVLLEQGVVDTLYTNISRQDLKAKMVCLEGFCNCVQAAGQSEKN 750 RN TWA+S L RGKP P L A+ L SDD ++++A W L + DG E++ ++ T V P ++ + S + PA++ VG++ + D+ + +++ AL +L LL +++++E+ +T+SNITAG ++ +D+ + P+ V +D V +A W +A + + + L+ +G + + +S D VCL+ F + + G++E++ Sbjct: 219 RNTTWALSTLCRGKPQPSSETTNAILSALERLIHSDDEEVLTNACWALYFLSDGNREQIQAVIETGVCPRLVGLLLHPSPSLLIPALKTVGNIVSEDDFQTQYMIDCQALPSLLSLLKHTRNKDIKREVCWTISNITAGTTEQIQAVIDADIIPYLVHLLQTDDFGVKREAAWAIAFVASGGTPEQ--IKYLVREGCIKPVCGLLSCPDKDLVRVCLQ-FLGHILSVGKAERD 448
BLAST of mRNA_M-pyrifera_M_contig86161.20078.1 vs. uniprot
Match: A0A6A3B4V1_HIBSY (Importin subunit alpha n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3B4V1_HIBSY) HSP 1 Score: 103 bits (256), Expect = 1.510e-21 Identity = 70/249 (28.11%), Postives = 122/249 (49.00%), Query Frame = 1 Query: 1 LEPLLHLATNSTSLELRRNATWAVSNLFRGKPPPLLAMVLPYLPAVCALAKSDDNPIVSDALWCLAYFCDGGEERLVHMLRTNVLPVVLQRVASNSEQVHAPAMRIVGSVATGPDYLVEALLNMGALHALTQLLSLRPRQNVRKELFFTLSNITAGWLPHVRLFLDSPLAPHTVAAANQEDSEVALQALWTLANATTNFETDTKLLGVLLEQGVVDTLYTNISRQDLKAKMVCLEGFCNCVQAAGQSEK 747 L PLL + L + RNATW +SN RGKPP V P LP + L +D +++DA W L+Y DG +++ ++ V +++ +A S V PA+R VG++ +G D + L++ L L Q L +++++KE+ +T+SNITAG ++ +++ + V + +E + + L+ QG + L + D + VCLEG N ++ G+++K Sbjct: 181 LMPLLAQLNERSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPVLQELIYLNDEEVLTDACWALSYLSDGPIDKIQAVIEAGVCQRLVELLAHPSPTVLVPALRTVGNIVSGDDNQTQFLIDNKVLPQLYQFLVQNHKKSIKKEVCWTISNITAGNRAQIQAVIEANIILPLVHLL--QHAEFXXXXXXXXXXXXXXXXGSHEQILFLVGQGCIKPLCDLLICPDPRVVSVCLEGLENILKV-GEADK 426
BLAST of mRNA_M-pyrifera_M_contig86161.20078.1 vs. uniprot
Match: A0A8J2F9T5_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2F9T5_9DINO) HSP 1 Score: 99.4 bits (246), Expect = 4.510e-20 Identity = 55/147 (37.41%), Postives = 84/147 (57.14%), Query Frame = 1 Query: 1 LEPLLHLATNSTSLELRRNATWAVSNLFRGKPPPLLAMVLPYLPAVCALAKSDDNPIVSDALWCLAYFCDGGEE--RLVHMLRTNVLPVVLQRVASNSEQVHAPAMRIVGSVATGPDYLVEALLNMGALHALTQLLSLRPRQNVRKE 435 L+P++ +S SLEL RNATW +SNL RG+PPP V P L V L +D +V DA W LAYFCDG + R+ H+++ V + ++ PA+R+VG++ G D + +L+ AL L +L+ ++++RKE Sbjct: 363 LQPIMEQVRHSGSLELLRNATWTISNLCRGRPPPRFEEVAPCLAIVQMLIYHNDLEVVIDACWALAYFCDGDQSARRVDHIIQAGVCKKACELLSHEDYLAVIPALRLVGNICVGTDTQTDYILDCDALPQLMKLMQ-HAKKHLRKE 508 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86161.20078.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86161.20078.1 >prot_M-pyrifera_M_contig86161.20078.1 ID=prot_M-pyrifera_M_contig86161.20078.1|Name=mRNA_M-pyrifera_M_contig86161.20078.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=250bp LEPLLHLATNSTSLELRRNATWAVSNLFRGKPPPLLAMVLPYLPAVCALAback to top mRNA from alignment at M-pyrifera_M_contig86161:94..843- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86161.20078.1 ID=mRNA_M-pyrifera_M_contig86161.20078.1|Name=mRNA_M-pyrifera_M_contig86161.20078.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig86161:94..843- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86161:94..843- >mRNA_M-pyrifera_M_contig86161.20078.1 ID=mRNA_M-pyrifera_M_contig86161.20078.1|Name=mRNA_M-pyrifera_M_contig86161.20078.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1500bp|location=Sequence derived from alignment at M-pyrifera_M_contig86161:94..843- (Macrocystis pyrifera P11B4 male)back to top |