mRNA_M-pyrifera_M_contig8616.20076.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8616.20076.1
Unique NamemRNA_M-pyrifera_M_contig8616.20076.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig8616.20076.1 vs. uniprot
Match: D7G827_ECTSI (40S ribosomal protein S6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G827_ECTSI)

HSP 1 Score: 429 bits (1102), Expect = 4.780e-147
Identity = 230/242 (95.04%), Postives = 235/242 (97.11%), Query Frame = 2 
Query:   68 MKLNIASPATGSQMFIEIDDEKKLRALYDKRISQEVDGEALGDEFAGYMFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRPRRRGERKRKSVRGCIVASDLAVLNLVVTKKGEHDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFEKNGKTVTKRPNIQRLITPIRLQRKRARAAAMKKGQAKSQRDASEYASLYAQRQKEQKEARRSMISKRRSSRKASAKVVS 793
            MKLNIASP TGSQMFIEIDDEKKLRALYDKRISQEV+GEALGDEFAGYMFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYR RRRGERKRKSVRGCIVA+DLAVLNLVVTKKGE DIPGLTDAPVPRRLGPKRANNIRKLFNLGK+DDVRKYVIARKFEK GKTVTKRP+IQRLITPIRLQRKRARAAA K  QAKSQRDASEYASLYAQRQKEQKEARRSMISKRRSSRKASAKVV+
Sbjct:    1 MKLNIASPGTGSQMFIEIDDEKKLRALYDKRISQEVEGEALGDEFAGYMFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRQRRRGERKRKSVRGCIVAADLAVLNLVVTKKGEQDIPGLTDAPVPRRLGPKRANNIRKLFNLGKDDDVRKYVIARKFEKKGKTVTKRPHIQRLITPIRLQRKRARAAAKKIAQAKSQRDASEYASLYAQRQKEQKEARRSMISKRRSSRKASAKVVA 242
[Close]
BLAST of mRNA_M-pyrifera_M_contig8616.20076.1 vs. uniprot
Match: A0A836CDZ2_9STRA (40S ribosomal protein S6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDZ2_9STRA)

HSP 1 Score: 367 bits (942), Expect = 8.770e-123
Identity = 195/240 (81.25%), Postives = 212/240 (88.33%), Query Frame = 2 
Query:   68 MKLNIASPATGSQMFIEIDDEKKLRALYDKRISQEVDGEALGDEFAGYMFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRPRRRGERKRKSVRGCIVASDLAVLNLVVTKKGEHDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFEKNGKTVTKRPNIQRLITPIRLQRKRARAAAMKKGQAKSQRDASEYASLYAQRQKEQKEARRSMISKRRSSRKASAKV 787
            MKLNIA P TG+Q FIE DDEKKLRALYDKRISQEV+GEALG+EF+GY+FRISGGNDKQGFPMKQGVL  +RVRLLL KG+SCYRPRR+GERKRKSVRGCIV SDLAVLNLV+ KKGE ++PGLTD  VPRRLGPKRAN IRKLFNL KEDDVRKYVIARKFEK GKTVTKRP IQRLITP +LQR R RA+  K+ Q KS+ DA+EY  LYAQR KE KEARRS+ISKRRSSRKASAKV
Sbjct:    1 MKLNIAFPTTGAQKFIECDDEKKLRALYDKRISQEVEGEALGEEFSGYVFRISGGNDKQGFPMKQGVLCNHRVRLLLSKGLSCYRPRRKGERKRKSVRGCIVGSDLAVLNLVIVKKGEGEVPGLTDVTVPRRLGPKRANKIRKLFNLSKEDDVRKYVIARKFEKKGKTVTKRPKIQRLITPAKLQRTRRRASLKKQAQVKSKADAAEYGRLYAQRMKEAKEARRSIISKRRSSRKASAKV 240
[Close]
BLAST of mRNA_M-pyrifera_M_contig8616.20076.1 vs. uniprot
Match: A0A7S0LPA9_9EUKA (40S ribosomal protein S6 n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LPA9_9EUKA)

HSP 1 Score: 322 bits (826), Expect = 2.790e-105
Identity = 172/239 (71.97%), Postives = 198/239 (82.85%), Query Frame = 2 
Query:   68 MKLNIASPATGSQMFIEIDDEKKLRALYDKRISQEVDGEALGDEFAGYMFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRPRRRGERKRKSVRGCIVASDLAVLNLVVTKKGEHDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFEKNGKTVTKRPNIQRLITPIRLQRKRARAAAMKKGQAKSQRDASEYASLYAQRQKEQKEARRSMISKRRSSRKASAK 784
            MK+NIA PATG+Q FI+IDDEKKLR LYDKRISQEV+GE LGDEFAGY+FRISGGNDKQGFPMKQGVL+  RVRLLL +GVSCYR RR GERKRKSVRGCIV SDLAVLNLV+ KKG+++I G TD  +P+RLGPKRA+ IR LFNL K DDVRKYVIAR FEK GKT+TKRP IQRL+TP+ ++RK+ R    KK    S+ +A+ Y +L  +R  EQKEARRS ISKRRSSR+AS K
Sbjct:    1 MKINIAYPATGNQKFIDIDDEKKLRTLYDKRISQEVNGEDLGDEFAGYIFRISGGNDKQGFPMKQGVLTNTRVRLLLKEGVSCYRARRVGERKRKSVRGCIVGSDLAVLNLVIIKKGDNEIEGFTDVSIPKRLGPKRASKIRNLFNLTKADDVRKYVIARTFEKKGKTITKRPKIQRLVTPVTIRRKKQREVKAKKALENSKAEAAAYTALVHKRIAEQKEARRSEISKRRSSRRASTK 239
[Close]
BLAST of mRNA_M-pyrifera_M_contig8616.20076.1 vs. uniprot
Match: A0A7S2RIP4_9STRA (40S ribosomal protein S6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIP4_9STRA)

HSP 1 Score: 320 bits (821), Expect = 1.640e-104
Identity = 176/240 (73.33%), Postives = 199/240 (82.92%), Query Frame = 2 
Query:   68 MKLNIASPATGSQMFIEIDDEKKLRALYDKRISQEVDGEALGDEFAGYMFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRPRRRGERKRKSVRGCIVASDLAVLNLVVTKKGEHDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFE-KNGKTVTKRPNIQRLITPIRLQRKRARAAAMKKGQAKSQRDASEYASLYAQRQKEQKEARRSMISKRRSSRKASAK 784
            M  NI++P TG Q  I IDDE+KLRA+YD RI+QE+DG ALG+EFAGY+FRISGGNDKQGFPMKQGVLS  RVRLLLHKG SCYR R+ GERKRKSVRGCIV SDLAVLNLVVTKKG+ +I GLTDA VPRRLGPKRA+ IR+LFNL KEDDVRK V+ R FE K GKTVTK P IQRL+TP+ LQRKRAR AA      K++ +A+EY+ L AQR +EQKEARRS ISKRRSSRK+S K
Sbjct:    1 MMFNISNPMTGCQKCITIDDERKLRAVYDLRIAQELDGSALGEEFAGYVFRISGGNDKQGFPMKQGVLSNTRVRLLLHKGASCYRQRKTGERKRKSVRGCIVGSDLAVLNLVVTKKGDAEIEGLTDASVPRRLGPKRASKIRQLFNLDKEDDVRKVVVRRSFENKAGKTVTKSPKIQRLVTPLTLQRKRARKAAKVAAVEKARTEAAEYSKLRAQRAREQKEARRSAISKRRSSRKSSKK 240
[Close]
BLAST of mRNA_M-pyrifera_M_contig8616.20076.1 vs. uniprot
Match: W7TEA2_9STRA (40S ribosomal protein S6 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEA2_9STRA)

HSP 1 Score: 316 bits (809), Expect = 1.060e-102
Identity = 169/241 (70.12%), Postives = 197/241 (81.74%), Query Frame = 2 
Query:   68 MKLNIASPATGSQMFIEIDDEKKLRALYDKRISQEVDGEALGDEFAGYMFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRPRRRGERKRKSVRGCIVASDLAVLNLVVTKKGEHDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFE-KNGKTVTKRPNIQRLITPIRLQRKRARAAAMKKGQAKSQRDASEYASLYAQRQKEQKEARRSMISKRRSSRKASAKV 787
            MKLNIA+P TG Q  +EIDDEK+LRA YD+RISQEVDGE +GDEF GY+F+ISGGNDKQGFPMKQGVL+  RVRLLL KG+SCYR RR+GERKRKSVRG IV  DL+VLNLV+ K+GE D+ GLTD+ VPRRLGPKRANNIRKLFNL K+ DV  Y + RKFE K GKTV K+P IQRLITP+RLQ KR R  A K    K++ +A+EY  ++ QR  E+KE+RRS ISKRRSSR+ASAKV
Sbjct:    1 MKLNIANPQTGQQHVVEIDDEKRLRAFYDRRISQEVDGEHIGDEFKGYVFKISGGNDKQGFPMKQGVLTDQRVRLLLRKGLSCYRARRKGERKRKSVRGAIVGPDLSVLNLVLVKRGEEDVVGLTDSAVPRRLGPKRANNIRKLFNLSKDADVTTYPVERKFENKKGKTVVKKPKIQRLITPLRLQHKRRRLEAKKAATTKAKAEAAEYHRIFQQRLNERKESRRSAISKRRSSRRASAKV 241
[Close]
BLAST of mRNA_M-pyrifera_M_contig8616.20076.1 vs. uniprot
Match: F0YLS6_AURAN (40S ribosomal protein S6 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLS6_AURAN)

HSP 1 Score: 313 bits (803), Expect = 9.140e-102
Identity = 173/242 (71.49%), Postives = 195/242 (80.58%), Query Frame = 2 
Query:   68 MKLNIASPATGSQMFIEIDDEKKLRALYDKRISQEVDGEALGDEFAGYMFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRPRRRGERKRKSVRGCIVASDLAVLNLVVTKKGEHDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFE-KNGKTVTKRPNIQRLITPIRLQRKRARAAAMKKGQAKSQRDASEYASLYAQRQKEQKEARRSMISKRRSSRKASAKVV 790
            MKLNIA P+TG+Q F+EIDDEKKLRALYD+RISQEVDGEALG+EFAGY+FRI+GGNDKQGFPMKQGVL  +RVRLLL  G SCYR RR GERKRKSVRGCIV +DLAVLNLVV K+G+ DI GLTD PV  RLGPKRAN IRKLF L K+DDVRKYVIARKFE K GK+VTK P IQRLITP+ LQRKR R         K++ +A EY  +   R +EQK+ARRS ISKRRSSRK+  +  
Sbjct:    1 MKLNIACPSTGAQKFLEIDDEKKLRALYDRRISQEVDGEALGEEFAGYVFRITGGNDKQGFPMKQGVLCNHRVRLLLRAGASCYRQRRAGERKRKSVRGCIVGADLAVLNLVVVKQGDADIEGLTDTPVAVRLGPKRANKIRKLFALTKDDDVRKYVIARKFENKKGKSVTKAPKIQRLITPLCLQRKRDRKRVKMAAITKAKAEAVEYNRVKTMRMQEQKDARRSAISKRRSSRKSKTQAT 242
[Close]
BLAST of mRNA_M-pyrifera_M_contig8616.20076.1 vs. uniprot
Match: A0A6A3NLQ1_9STRA (40S ribosomal protein S6 n=8 Tax=Sar TaxID=2698737 RepID=A0A6A3NLQ1_9STRA)

HSP 1 Score: 311 bits (796), Expect = 2.610e-100
Identity = 168/246 (68.29%), Postives = 195/246 (79.27%), Query Frame = 2 
Query:   47 CLRGLANMKLNIASPATGSQMFIEIDDEKKLRALYDKRISQEVDGEALGDEFAGYMFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRPRRRGERKRKSVRGCIVASDLAVLNLVVTKKGEHDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFE-KNGKTVTKRPNIQRLITPIRLQRKRARAAAMKKGQAKSQRDASEYASLYAQRQKEQKEARRSMISKRRSSRKASA 781
            CL   + MKLNIA+P TG+Q  +E+DDE KLRA YDKRISQE++G+ LGDEF G++FR+SGGNDKQGFPMKQGVLS  R RLLL KG +CYRPRR+GERKRKSVRGCIV  DL+VLNLVV K GE D+PGLTD  +PRRLGPKRA+NIRKLFNL KEDDVRKYVI RKF+ K GK   K P IQRL+TP  L  KR  A    + + K QR+A+EY  L+AQR KEQK+ R S I+KRRSSRKAS+
Sbjct:   23 CLVRFSTMKLNIANPLTGAQKVLEVDDEHKLRAFYDKRISQEIEGDVLGDEFKGFVFRVSGGNDKQGFPMKQGVLSNGRARLLLSKGKTCYRPRRKGERKRKSVRGCIVGPDLSVLNLVVVKAGEADVPGLTDVQIPRRLGPKRASNIRKLFNLTKEDDVRKYVIRRKFDSKTGKKNDKAPKIQRLVTPRTLHHKRQIALKKVQQREKVQREAAEYNRLHAQRVKEQKDRRASEIAKRRSSRKASS 268
[Close]
BLAST of mRNA_M-pyrifera_M_contig8616.20076.1 vs. uniprot
Match: M4B486_HYAAE (40S ribosomal protein S6 n=23 Tax=Oomycota TaxID=4762 RepID=M4B486_HYAAE)

HSP 1 Score: 306 bits (785), Expect = 4.420e-99
Identity = 166/239 (69.46%), Postives = 190/239 (79.50%), Query Frame = 2 
Query:   68 MKLNIASPATGSQMFIEIDDEKKLRALYDKRISQEVDGEALGDEFAGYMFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRPRRRGERKRKSVRGCIVASDLAVLNLVVTKKGEHDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFE-KNGKTVTKRPNIQRLITPIRLQRKRARAAAMKKGQAKSQRDASEYASLYAQRQKEQKEARRSMISKRRSSRKASA 781
            MKLNIA+P TG+Q  +E+DDE KLRA YDKRISQE+DG  LG+EF G++FR+SGGNDKQGFPMKQGVLS  R RLLL KG SCYRPRR+GERKRKSVRGCIV  DL+VLNLVV K GE D+PGLTD  +PRRLGPKRA+NIRKLFNL KEDDVRKYVI RKFE K GK   K P IQRL+TP  L  KR  A    + + K QR+A+EY  L+AQR KEQK+ R S ++KRRSSRK S+
Sbjct:    1 MKLNIANPLTGAQKVLEVDDEHKLRAFYDKRISQEIDGAVLGEEFKGFIFRVSGGNDKQGFPMKQGVLSNGRARLLLSKGKSCYRPRRKGERKRKSVRGCIVGPDLSVLNLVVVKAGEADVPGLTDVQIPRRLGPKRASNIRKLFNLTKEDDVRKYVIRRKFESKTGKKNDKAPKIQRLVTPRTLHHKRQIALKKVQQREKVQREAAEYNRLHAQRVKEQKDRRASEVAKRRSSRKVSS 239
[Close]
BLAST of mRNA_M-pyrifera_M_contig8616.20076.1 vs. uniprot
Match: A0A7S2WN65_9STRA (40S ribosomal protein S6 n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WN65_9STRA)

HSP 1 Score: 302 bits (773), Expect = 3.040e-97
Identity = 163/243 (67.08%), Postives = 195/243 (80.25%), Query Frame = 2 
Query:   68 MKLNIASPATGSQMFIEIDDEKKLRALYDKRISQEVDGEALGDEFAGYMFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRPRRRGERKRKSVRGCIVASDLAVLNLVVTKKGEHDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKF-EKNGKTVTKRPNIQRLITPIRLQRKRARAAAMKKGQAKSQRDASEYASLYAQRQKEQKEARRSMISKRRSSRKASAKVVS 793
            MK+N+A P+TG Q  +EIDDEK+L+ALY++R++QEVDG  LGDEFAGY+FRISGGNDKQGFPM+QG+L+  RVRLL  KG  CYRPR  GERKRKSVRGCIV  D+AVLNLVVTK G+  + GLTD   PRRLGPKRANNIRKLFNL K+DDVR+YVIAR F  K G TV K P IQRL+TP+ LQRKRAR A+  K   ++Q +A+ Y+ L  QR  EQK+ARRS+ISKRRS+RK SAK+ +
Sbjct:    1 MKINLACPSTGLQKIVEIDDEKRLQALYERRMAQEVDGSLLGDEFAGYVFRISGGNDKQGFPMRQGILTNTRVRLLCKKGDKCYRPRVTGERKRKSVRGCIVGHDIAVLNLVVTKIGDEKVAGLTDDSAPRRLGPKRANNIRKLFNLTKDDDVRQYVIARTFTNKKGHTVRKAPRIQRLVTPLTLQRKRARKASKMKSILRNQEEAAAYSKLVTQRAAEQKDARRSLISKRRSTRK-SAKLAT 242
[Close]
BLAST of mRNA_M-pyrifera_M_contig8616.20076.1 vs. uniprot
Match: A0A6U3NWB1_9STRA (40S ribosomal protein S6 n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6U3NWB1_9STRA)

HSP 1 Score: 297 bits (761), Expect = 2.090e-95
Identity = 163/243 (67.08%), Postives = 194/243 (79.84%), Query Frame = 2 
Query:   68 MKLNIASPATGSQMFIEIDDEKKLRALYDKRISQEVDGEALGDEFAGYMFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRPRRRGERKRKSVRGCIVASDLAVLNLVVTKKGEHDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKF-EKNGKTVTKRPNIQRLITPIRLQRKRARAAAMKKGQAKSQRDASEYASLYAQRQKEQKEARRSMISKRRSSRKASAKVVS 793
            MK+NIA+P+TG Q  IEIDDEK+L+ LY++R++QE+DG  LGDEF GY+ RISGGNDKQGFPM+QGVL+  RVRLL  KG + YRPRR GERKRKSVRGCIV  D+AVLNLVVTK G++ I GLTD  +PRRLGPKRAN IR LFNL K+DDVRKYVIAR F  K GKTV K P IQRL+TP+ LQRKRAR AA      +++ +A+ Y  + AQR  EQKEARRS+ISKRRS+RK SAK+ +
Sbjct:    1 MKINIAAPSTGMQKIIEIDDEKRLQNLYERRMAQEIDGGVLGDEFEGYVLRISGGNDKQGFPMRQGVLTNTRVRLLCKKGHAAYRPRRTGERKRKSVRGCIVGQDIAVLNLVVTKVGDNPIAGLTDDNIPRRLGPKRANKIRALFNLTKDDDVRKYVIARTFTNKKGKTVRKAPKIQRLVTPLTLQRKRARKAAKMNSVLRNKEEAAAYKKVVAQRLAEQKEARRSLISKRRSTRK-SAKLAA 242
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8616.20076.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G827_ECTSI4.780e-14795.0440S ribosomal protein S6 n=2 Tax=Ectocarpus TaxID=... [more]
A0A836CDZ2_9STRA8.770e-12381.2540S ribosomal protein S6 n=1 Tax=Tribonema minus T... [more]
A0A7S0LPA9_9EUKA2.790e-10571.9740S ribosomal protein S6 n=1 Tax=Coccolithus braar... [more]
A0A7S2RIP4_9STRA1.640e-10473.3340S ribosomal protein S6 n=1 Tax=Rhizochromulina m... [more]
W7TEA2_9STRA1.060e-10270.1240S ribosomal protein S6 n=2 Tax=Monodopsidaceae T... [more]
F0YLS6_AURAN9.140e-10271.4940S ribosomal protein S6 n=1 Tax=Aureococcus anoph... [more]
A0A6A3NLQ1_9STRA2.610e-10068.2940S ribosomal protein S6 n=8 Tax=Sar TaxID=2698737... [more]
M4B486_HYAAE4.420e-9969.4640S ribosomal protein S6 n=23 Tax=Oomycota TaxID=4... [more]
A0A7S2WN65_9STRA3.040e-9767.0840S ribosomal protein S6 n=1 Tax=Eucampia antarcti... [more]
A0A6U3NWB1_9STRA2.090e-9567.0840S ribosomal protein S6 n=2 Tax=Lithodesmiaceae T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8616contigM-pyrifera_M_contig8616:715..8151 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score430.6
Seed ortholog evalue4.7e-118
Seed eggNOG ortholog2880.D7G827
Preferred nameRPS6
KEGG koko:K02991,ko:K07611,ko:K13022,ko:K14498,ko:K17284
KEGG Pathwayko01521,ko03010,ko03320,ko04016,ko04066,ko04075,ko04150,ko04151,ko04210,ko04214,ko04371,ko04714,ko04910,ko05205,map01521,map03010,map03320,map04016,map04066,map04075,map04150,map04151,map04210,map04214,map04371,map04714,map04910,map05205
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000028,GO:0000075,GO:0000082,GO:0000184,GO:0000278,GO:0000281,GO:0000462,GO:0000910,GO:0000956,GO:0001775,GO:0001776,GO:0001890,GO:0002181,GO:0002252,GO:0002260,GO:0002262,GO:0002263,GO:0002285,GO:0002286,GO:0002309,GO:0002366,GO:0002376,GO:0002520,GO:0002521,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005783,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0005938,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006915,GO:0006924,GO:0006955,GO:0006996,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0007369,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008283,GO:0008340,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009735,GO:0009790,GO:0009892,GO:0009987,GO:0010033,GO:0010243,GO:0010259,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0010941,GO:0010942,GO:0012501,GO:0012505,GO:0015031,GO:0015833,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022605,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0023052,GO:0030054,GO:0030097,GO:0030098,GO:0030099,GO:0030154,GO:0030217,GO:0030218,GO:0030425,GO:0030490,GO:0030587,GO:0030684,GO:0030686,GO:0031929,GO:0031974,GO:0031981,GO:0032040,GO:0032501,GO:0032502,GO:0032504,GO:0032868,GO:0032943,GO:0032991,GO:0033036,GO:0033077,GO:0033365,GO:0033500,GO:0034101,GO:0034470,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0035556,GO:0035690,GO:0035770,GO:0036464,GO:0036477,GO:0042098,GO:0042110,GO:0042221,GO:0042254,GO:0042255,GO:0042274,GO:0042493,GO:0042592,GO:0042593,GO:0042788,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043029,GO:0043043,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043434,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044297,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044843,GO:0045047,GO:0045184,GO:0045321,GO:0045471,GO:0045786,GO:0045930,GO:0046483,GO:0046649,GO:0046651,GO:0046677,GO:0046700,GO:0046907,GO:0048468,GO:0048471,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048598,GO:0048608,GO:0048609,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051301,GO:0051641,GO:0051649,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0055044,GO:0060255,GO:0060548,GO:0061458,GO:0061515,GO:0061640,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070227,GO:0070231,GO:0070661,GO:0070727,GO:0070887,GO:0070925,GO:0070938,GO:0070972,GO:0071236,GO:0071310,GO:0071361,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0071887,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0090702,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097447,GO:0097458,GO:0099120,GO:0099568,GO:0120025,GO:0120038,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901652,GO:1901698,GO:1901700,GO:1901701,GO:1901888,GO:1901889,GO:1903047,GO:1903347,GO:1990904,GO:2000810
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsCOG2125@1,KOG1646@2759
Ec32 ortholog descriptionRibosomal protein S6e
Ec32 orthologEc-00_010570.1
EC2.7.11.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01001,ko01002,ko03011,ko04147,ko04812
Exons6
Model size1451
Cds size729
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8616.20076.1prot_M-pyrifera_M_contig8616.20076.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8616 782..7496 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816771.962023-UTR-M-pyrifera_M_contig8616:714..7811622816771.962023-UTR-M-pyrifera_M_contig8616:714..781Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8616 715..781 +
1692278169.3072143-UTR-M-pyrifera_M_contig8616:714..7811692278169.3072143-UTR-M-pyrifera_M_contig8616:714..781Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8616 715..781 +
1622816772.0572793-UTR-M-pyrifera_M_contig8616:7496..81511622816772.0572793-UTR-M-pyrifera_M_contig8616:7496..8151Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8616 7497..8151 +
1692278169.3818865-UTR-M-pyrifera_M_contig8616:7496..81511692278169.3818865-UTR-M-pyrifera_M_contig8616:7496..8151Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8616 7497..8151 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816771.9764345-CDS-M-pyrifera_M_contig8616:781..7871622816771.9764345-CDS-M-pyrifera_M_contig8616:781..787Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8616 782..787 +
1692278169.3226643-CDS-M-pyrifera_M_contig8616:781..7871692278169.3226643-CDS-M-pyrifera_M_contig8616:781..787Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8616 782..787 +
1622816771.9903429-CDS-M-pyrifera_M_contig8616:1147..12121622816771.9903429-CDS-M-pyrifera_M_contig8616:1147..1212Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8616 1148..1212 +
1692278169.3340275-CDS-M-pyrifera_M_contig8616:1147..12121692278169.3340275-CDS-M-pyrifera_M_contig8616:1147..1212Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8616 1148..1212 +
1622816772.0046751-CDS-M-pyrifera_M_contig8616:1908..19811622816772.0046751-CDS-M-pyrifera_M_contig8616:1908..1981Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8616 1909..1981 +
1692278169.3460727-CDS-M-pyrifera_M_contig8616:1908..19811692278169.3460727-CDS-M-pyrifera_M_contig8616:1908..1981Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8616 1909..1981 +
1622816772.0226624-CDS-M-pyrifera_M_contig8616:5445..57481622816772.0226624-CDS-M-pyrifera_M_contig8616:5445..5748Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8616 5446..5748 +
1692278169.354599-CDS-M-pyrifera_M_contig8616:5445..57481692278169.354599-CDS-M-pyrifera_M_contig8616:5445..5748Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8616 5446..5748 +
1622816772.0348537-CDS-M-pyrifera_M_contig8616:6582..67641622816772.0348537-CDS-M-pyrifera_M_contig8616:6582..6764Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8616 6583..6764 +
1692278169.3634017-CDS-M-pyrifera_M_contig8616:6582..67641692278169.3634017-CDS-M-pyrifera_M_contig8616:6582..6764Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8616 6583..6764 +
1622816772.0463123-CDS-M-pyrifera_M_contig8616:7396..74961622816772.0463123-CDS-M-pyrifera_M_contig8616:7396..7496Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8616 7397..7496 +
1692278169.3725665-CDS-M-pyrifera_M_contig8616:7396..74961692278169.3725665-CDS-M-pyrifera_M_contig8616:7396..7496Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8616 7397..7496 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8616.20076.1

>prot_M-pyrifera_M_contig8616.20076.1 ID=prot_M-pyrifera_M_contig8616.20076.1|Name=mRNA_M-pyrifera_M_contig8616.20076.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=243bp
MKLNIASPATGSQMFIEIDDEKKLRALYDKRISQEVDGEALGDEFAGYMF
RISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRPRRRGERKRKSVRGC
IVASDLAVLNLVVTKKGEHDIPGLTDAPVPRRLGPKRANNIRKLFNLGKE
DDVRKYVIARKFEKNGKTVTKRPNIQRLITPIRLQRKRARAAAMKKGQAK
SQRDASEYASLYAQRQKEQKEARRSMISKRRSSRKASAKVVS*
back to top

mRNA from alignment at M-pyrifera_M_contig8616:715..8151+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8616.20076.1 ID=mRNA_M-pyrifera_M_contig8616.20076.1|Name=mRNA_M-pyrifera_M_contig8616.20076.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7437bp|location=Sequence derived from alignment at M-pyrifera_M_contig8616:715..8151+ (Macrocystis pyrifera P11B4 male)
TGTCGAGGTGCTCGTCGTCAAGTCAGTAGACCCCTGCAGGCTCCGGTGCC
TGAGAGGTCTTGCAAATATGAAGGCACGTGGTAGTGTTGCGTTTCGTGGA
TTTTGGTGTTGGCGATATGCTTCGATATGCTTGGTCGAGGGAGAAATGTT
GAGACAGTCTGTTTTTGCGGCGGCAGAGGGGTGCTTACGCGCCGGGAGGA
ATGGCCAACAAGGATAGCTCGCAATGGAGCTCAACTTGGGCAGCGCGAAC
TCCAGCCACGTCGTTACCTGAGGCATCCAATGGCGAGTTGATCACGACGA
AGCTGTGTGCTTGATGATGCTTATTCTGTTCTTCCCTCTGCCCTTTTGTT
TCCTGTCCTTGTGCTGCCCCCCTTGTTCCTCGTCGGTGGTGCTATTTTCT
CCTGCCTTATGGTGATGGTGCTGGTGGCAACAGCTCAACATTGCTTCGCC
CGCAACGGGCTCGCAGATGTTCATCGAGATCGATGACGAGAAGAAGCTGT
AAGTGTTCCTGGCGATGTGTGCTCCTAGTTGTGTATACGTGTGAGCATTC
TGTGCCATCGCTGGTGTTTTTCCTGTCTTCGCGTACTGTTTGTTCATAGC
AGAGCGTACTTGCTTGGCCACGACGTACAAAAAACGAGTACCTGGTACAA
CATTTGGTGGAAACCTATCGCACGAGGTATTCCTGAACGTGGTACGTCAA
GTGGTGAACCATGCTTTGTACTCGGGACTGGGCATCGCATCATTCGTAAA
CGTTGAAATGGAGGGTCCATACGCGCGACGAGTAGCCGATGTATCATAAT
GTCCTACCTTACCTTTGCTGCGCCAAGACTGTATATATATGATTGAGCGG
TCAGCGGCCCAACCCCCTCCTTGTACAGCAGTACTGCTGTAAGCACTTTT
TTCACTTTTTGTACTGCTGTAGTATTCGTATCATGGTACTCGTATCATGG
TACCCGGTACACTACGCTTACGCCGAGCTTTACTCACTACGCCGAGCTTT
ACTTAGGTACCAGAGGGTATCATGTCATCTAAATATCGTACCATTAAGTT
ACATATACCAAGTAGAGCCCATAGTTGAAAAACGTCAATTTGGTTTCTTG
TCGACGTAATCTCACGCTGCCTCTCGTCGCGTGGTTCCCCTTCTCTTCGC
TTCGCCATTTCGGTTTATGTGGGTTCGGTTCGGCCGGTCACCAGCCGTGC
CCTTTACGACAAGCGCATCTCTCAGGAAGTGGATGGCGAGGCTCTCGGGG
ATGAATTCGCTGGATACGTGAGTGCTGTTTATAGCGGCGAAACCCTCACT
TGGTTCACGTACAAGTAGCACTTATCCATGCCTGGTGCATCAGCGTACCA
GGCACCCTCGGGTTCAGCAGCTACAAGCGCGTGATAGTATTTCCAGTCGT
TACTCGCTTGTTATTCTGGGTATGAATACATCCATAGCGCCGTAAGAATA
CACACTTTCTTCCGATACGGCATGGGTTGCTATCGGCACGTCCAGAAGGC
TCCATCGAGTTGCATGCCGCTATTTTGGAAAGCTGTGTACGACAGCCACC
AAATCATGCATACCCTATCATCAAGCCCCGATATCGACGCGAAGTATCGA
CAACCTACTCTATGTATATACGATATTGATACTGATAAAAACATTTGGCA
CGGTCAACCGTCCCTCATCAGCTACCAGCCCACGGCGACGCCTTAGCTGA
CCGGTTCGTCGTATGCCGACGACAACCCTACATACAAACACCATAGCATA
TACAGGAAATCCCGCCCCTCCGGGGCGCGGCTAACTGCAGTCTACGGAGT
GAGAGAGAACCGGAAGTCCATTCACACATGAACCACCGACGCACCGAGTG
AAGCCCGGGGATAACATCTCCATCATTCGAGGAAGATTGACCCATTGTTG
CTGGTGAAGGTGGTTTGTGTTGGTTCGATTCTTGTTTCAGCCCGTAGTGC
TCAGCTATGGGTGCGAAGTGCTAGGTGTTTGGATAACAGGTGACAATGCA
CCGACGACGGATAGCATATTGGAGGGGTGGAGCGTTTTCACGTCATAGAG
GGGTTAGGCGAAAGTGATTAAGCGTCGAACGTAAATGTCGGCTGCCGAGG
TGACTATGTAGCTCCTGCAGCCTTTCCGAGACATTTGTATCCCACGGTTA
ATAGCTTTCCGGTAACCCCTCTATGACGTGCAAACACCGCTTCCTTGACT
CCACTGGCTCTTGCTATCGGCTATCCATATCGGCGTATTGCCACCCGTGG
TGGAAACACCACAGCACCATTAGACCAGCCTTCCTCGAAGTCAGCCTCAC
AGATACTGTACCCTACCTCGACCCACGGCTGTTTCAACATCGGCGTTCCC
CCCCCGGAGTAGTGAATATCATCTGAGGGATTCCACTTGAAATTCGTCTT
ATCTCACTATGTGCTCAAGCACCACTTCACTTCCGCAGAGTAGCTTTTTC
AGATACCATTACAGCGTGTCTCCGTTATAAACACGAAAGAGGGCGTCGTC
CATCGTTGAGGATGCCGCAAATGCCTACAACATCTCCCGCTGCCCTTTTC
AGGCAGCAACAAAGCACGACGTGTCTAATACCGACCCGTCCTGCTGGATC
GATAGCCCCAGAGCTTTCACCATCTCCATGATAACGGGGGATGTTGCGGT
GTAAATGGTCTTTGGTCGCCGGTTTGCGCCTTGGCTTAGATGACGCACGA
AGACACGCTCTAGTTAGGTCGTAATTGTTTTTTTTCGAAGCGAGGTTGTT
TCGTCCCTAAGTGCTTTCTCTCGTTTCATACCGATGGTAAAATTGACGGG
GTATTTCTGCCAAGGTGCCGCAAAGAAAAAGACAAAATGTTTGACGCGCG
CGGATGGAGTAAGGGAAACACGCAAACTATTTACTACATTTGCAGTTCCC
TTCCTGGGTACCAGGATGCGTGTCGTCGTTATTTCGGGTCAGGATGACGG
CATCTATCTTGCGAATATGTATCATGCTGAGCAGACAACACCAAAACCAA
GGAAACTTTGCACTGCCCTGCAGAAGTCGGAACATACGTCAACGGCGAAG
AAGCGGCCAACGCCGGCATAGACAAAGCATGATGTTCCGTCCTGCTGTCT
CGGCTGTCGCGCCATGGAGGTCGTCGCGTTGTCAACTATACCCAAAACTG
CACGTGGCAACGAGTCCAGCGCGTCCTTCACAAAGATGTCTTGCGGAGGC
GCTTAGCCGATTTTGGGAGTGCGCTGGAAAGACTGGAAAGACCAAGGTCG
TCCGCGTAGTCGATAGTCGGCACGCACTACGCGGACAACCTTGGCAATAT
CAGCCGATGGTAGTCGGCTGGGCGCCTTCGCAAAAACATTGTTTGACGGA
GGCGCTGGACTGCTCGCTGCGTGTAGGCTTCGGTACGGTTAACAATGCGA
TGACCTCCCTGGCGCGAAAGCCTCTACCAAAGGGCGGACGGAACACCATG
CCTTGTCTATGTCGACGTCGGCCGCTTTTTGAATTACCCGAACGACCTAG
CATTCCCAGCGTACTGCAACATCGACTGGGCGTCTTCGCAGAAACATCTT
TGTAAAGGACGTAGTCGGACCTGGAAACAAGTAACACGAATGATACTCAT
TCGATTGCGATACTATTAATAACCCAATTATATAACACGCCTTCGTATCA
ATAGGTAAACCCGAAACACTGCTGTCCCCCGAGGTGGAAATCGCCGCACA
CATCCGGCAGTAGAGAATCAACGGTGACTACGTAAGCAGATCGTATGACG
GACATACTGGTATTATTAATAGTGTAAAACTGTACCGTCAGTACCCCGAT
GGTTATCTTTTAAATAGGTCCTAAAAACACTGTCCAAATGAACTGTACTC
AGGTGTAATAACGCTTGCGGTTTACGTCGGTTGGGTGGTTTTGCCAATTC
ATGTAGAGGGGACTCTCACGGGGTGTGAGGAAGTAGCCTAAAAGTTACAC
GCGACACTTGTCTTGGCAGTATGGAAAACTTGCACATGCGCCGGCCTATG
CTGAACTTCCGGTGTGACGGCTCTACCTGTACTCTTTCCCGGCCATGCCA
ATCAGGGGCAGCCTGATTGTGTGTTCCGTTGTTGTAGCCTTGAACACAAC
TCTTGTCTTGTTAGGTTTGCTGAACTTTTTAGATATCTTTTTGAAGGATC
TGCGCCTAGACACGACGCGGTTCAGAAGACACGTATGGAAGAGTCCAGGG
CAGACTGTTCTATTTTGGAAAAGTAGAAAAGTGGTGCGCTTCGTGTCGGA
GCTTGAGTATATGCGGGCAGTCATCTCCGTGGCGTGACAGACGCCGTTGT
GTTATCCACGTCGTCGTCGACTGTTCAAGTCTTGCGCCAACGTATCCGTC
GTTGCCGGCCGTGCACAACCCCCCTGGTGCTGTTTTTCCGTCCCCGTGTA
CTGCGGACCTGGAAGTGTATCGACTCCCGACAACTTGCGTGTAGTTAATT
CGTAGGTATGATACTGCTCTTTTTCGTTCGGGTGCAGCGAGCCTTTTTTA
TGTCTCCCAAGCTACTGTAGACTTCATTTAGTCCATGTCACATGCCATCC
CATCATACTAATCAAAGACCCACAGCAATTAATGTACTAATGTTCTCGCG
ATATTTAACTCGTATTTCTCGCTCTATTTGCAACTCAACGCCACAAGCTA
TAGCCCTCGCCTTGACGAGACGGTATTATTTTCTCGCACATACAATCGTC
TCAAACGTTTTTATACCTCCTTGTCCTCCAGATGTTCCGCATCTCCGGCG
GTAACGACAAGCAGGGTTTCCCCATGAAGCAGGGGGTGCTCTCCGCTAAC
CGCGTGCGCTTGTTGCTGCACAAGGGAGTGTCCTGCTACCGCCCCCGCCG
CCGCGGAGAGCGCAAGAGGAAGTCGGTGCGCGGGTGCATCGTGGCGTCCG
ACCTGGCCGTGCTTAACCTCGTCGTCACCAAGAAGGGCGAGCACGACATC
CCCGGACTCACGGACGCCCCTGTGCCCCGCCGCCTGGGCCCCAAGCGCGC
GAACAACATCCGCAAGCTCTTCAACCTCGGCAAGGTAAGGAGGGCGATCA
GTCAGTTGCTTGAGGGGCTGAATAGTTGTGGGGGTTGGTGCCGGACGGGC
GAGCCTGATTGGTTGATTTTTTGACAATTGACATACTTGTTTAGGCGTTG
TGGAGTATGGAATGGCTGATCGGTTTAGATGATGGGGGTGCGACTGTTTG
CGGTGCTTTTTGTTGACAAGCGATATCATTAGTCAAGTGGAAGTTGAAAG
ACTGGTCTCACAAATCTGTCGTGTAACGTTGTCACCTGTGCCATGCGTTT
TTGGGTGACACTATCGAGCTCGCTTTGGCATCGACTGGACGGCGAACAGC
TTGGTACCACTCGACCGACCAGGGCGTCCAACGTTCGGCGAGAAATAGAC
AAAGACCTTTAGCTTGTGCGCAAGGACATGTAAACTTGCACTTGCCATGC
CTTTCCCTTAAGATCAAAATATACTGTCGTCGGTGAGCATTGATCGGGCG
CCGCACGAGTGCGCGCTCTTTTTGTTCCGGCAATTCTGATTGTTAAATGA
ACCTTTATCTACTGTAGTACGGCAGATAGGCAGTGACGTTGTTTGGGGGT
TCATGTTGTGTACGATGTATATGGGTCCGCGCGCTAGGTCGGCGGCGGCG
TATAGTCTGATCTCATATAGTCTGCTTGGATATAGTGTACAAGGAAATGG
CATACGTGCCGACACATGCCATGTAGGCAATCGCTTGCAGATACTGTGGC
GGTTGTGTAGTTCTTTGGGGGCTGACACGACCGACGACTATTTATTCCAC
TGTTCCTAACACCCCCTCTGTGCCCACCCGCGCGTCTATTGCTGCTCACC
ACCTCTCTGCCCCTGCAGGAGGACGACGTGCGCAAGTACGTGATCGCCCG
CAAGTTCGAGAAGAACGGAAAGACCGTTACCAAGCGCCCCAACATCCAGC
GCCTCATTACCCCCATCCGCCTCCAGCGCAAGCGCGCGCGCGCTGCCGCC
ATGAAGAAGGGCCAGGCGAAAAGCCAGCGTGATGCGTCTGAGTACGCAAG
GTGCGTCATCCTCGTGTGCTGTGTCATGGGCGGTTGTGCTTCGTCGTCAG
CCTGTTCTGCGTGCGTGGATATTTTATTTTGGTGTTTTTGTAAAGTTTTC
GTTGACTTTTTTTTGTCTGCACACGGAGTTATAGTTTTTTTTTGTTGTCT
CGTTTGATTATTTTGGAACTGCACCCACTTTTATGGTAAAAACTACGAGG
AAATTGGGCAGGATACGTTTTGTTGTGTTAAGCAGTGAAGATTTTCAGTG
GATGGACTAAGACAACAGCCTTGGATACCATCACCCGCGAACCTTTTCTT
TTTCACGGGGGACATCGTTGAAGTAGCTGCAGGTGGCGAGTGTGTGCCTC
TCTTCGCTTCTGTCACGGTGTCAATCGTATTGACATCCAATGCACTATTC
GAACACGGCGCTCATTGACCAGGATGACAGATATGTACTCTCAAATCTCG
TCCATCAATCGACCCATGACTGTGATGTTCAGGTTGATATTCAGTGCTGT
GTTCGAACAAAGCGCCCATGGGCAAGGATGACATGCGTGTACGCTTTTCA
ATCTTGCGTCTAATGTGTGTTTTCTCTCCGTGCTCTGCCCATTTTCCCGT
TTCCTGACTGGAATCGTACCCTGCTCGCGCAGCCTGTACGCCCAGCGCCA
GAAGGAGCAGAAGGAGGCTCGCCGCTCCATGATCTCCAAGAGGCGTAGCT
CTCGCAAGGCTTCCGCCAAGGTCGTCTCCTAGGGAGTGCGTCCAACTCGG
CTTGATCGCGGATGGCACGGAAGACCGTTGCGCGTAGCTCTTCAGCTGCG
ATAAGCACTGCAGCCGGCTTTGAGGAGTAGGGACCCCGAAGTTTTTGGTT
CGCTGTTGGTTTTCTGTGTACGCTACTGCTGCTGCTGCCGCCGCTGTAAG
CAATGGTAGCGGTGCTTGTTAACGAAGGGGGGACATGACACCATCTTTTG
CTTCTTTATTTTGTCGCCCATGCGGCACGGACAACACACGCTTGTCGGAT
GCCATGCCAGAGGCGGCGGTTGTGCTACAGTACGCAACGCTTTATTTTCT
TCGGGGCCCATGCTGCACAATTTGTGGATGGCCTTTGGCAATCGCCCCGG
TTTCGCATGTCCTCAGCTGGTGTTCATCTCGCACTTAAGAATGCTTCGAT
AGTGGAACAGGACTTGGACGGTGTGAGTCGAGTCATTCACCTCTTGCACA
CAGCAGGCACGCGATACTACATAGAGTACTAACACACGACTGGATGCCTA
ACTTCTTGCAGCGACAGAAGTTGATTGCCCCAGCATTTACACGCACCATC
AATCAGATGGCGCCGACTCTCTCAGCTTCTCTGGTGTGTTGTGCATGTGG
ATACAAATGCCCACTCCTGATACCTCCATGTTTGGCC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig8616:715..8151+

>mRNA_M-pyrifera_M_contig8616.20076.1 ID=mRNA_M-pyrifera_M_contig8616.20076.1|Name=mRNA_M-pyrifera_M_contig8616.20076.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1458bp|location=Sequence derived from alignment at M-pyrifera_M_contig8616:715..8151+ (Macrocystis pyrifera P11B4 male)
ATGAAGATGAAGCTCAACATTGCTTCGCCCGCAACGGGCTCGCAGATGTT
CATCGAGATCGATGACGAGAAGAAGCTCTCAACATTGCTTCGCCCGCAAC
GGGCTCGCAGATGTTCATCGAGATCGATGACGAGAAGAAGCTCCGTGCCC
TTTACGACAAGCGCATCTCTCAGGAAGTGGATGGCGAGGCTCTCGGGGAT
GAATTCGCTGGATACCCGTGCCCTTTACGACAAGCGCATCTCTCAGGAAG
TGGATGGCGAGGCTCTCGGGGATGAATTCGCTGGATACATGTTCCGCATC
TCCGGCGGTAACGACAAGCAGGGTTTCCCCATGAAGCAGGGGGTGCTCTC
CGCTAACCGCGTGCGCTTGTTGCTGCACAAGGGAGTGTCCTGCTACCGCC
CCCGCCGCCGCGGAGAGCGCAAGAGGAAGTCGGTGCGCGGGTGCATCGTG
GCGTCCGACCTGGCCGTGCTTAACCTCGTCGTCACCAAGAAGGGCGAGCA
CGACATCCCCGGACTCACGGACGCCCCTGTGCCCCGCCGCCTGGGCCCCA
AGCGCGCGAACAACATCCGCAAGCTCTTCAACCTCGGCAAGATGTTCCGC
ATCTCCGGCGGTAACGACAAGCAGGGTTTCCCCATGAAGCAGGGGGTGCT
CTCCGCTAACCGCGTGCGCTTGTTGCTGCACAAGGGAGTGTCCTGCTACC
GCCCCCGCCGCCGCGGAGAGCGCAAGAGGAAGTCGGTGCGCGGGTGCATC
GTGGCGTCCGACCTGGCCGTGCTTAACCTCGTCGTCACCAAGAAGGGCGA
GCACGACATCCCCGGACTCACGGACGCCCCTGTGCCCCGCCGCCTGGGCC
CCAAGCGCGCGAACAACATCCGCAAGCTCTTCAACCTCGGCAAGGAGGAC
GACGTGCGCAAGTACGTGATCGCCCGCAAGTTCGAGAAGAACGGAAAGAC
CGTTACCAAGCGCCCCAACATCCAGCGCCTCATTACCCCCATCCGCCTCC
AGCGCAAGCGCGCGCGCGCTGCCGCCATGAAGAAGGGCCAGGCGAAAAGC
CAGCGTGATGCGTCTGAGTACGCAAGGAGGACGACGTGCGCAAGTACGTG
ATCGCCCGCAAGTTCGAGAAGAACGGAAAGACCGTTACCAAGCGCCCCAA
CATCCAGCGCCTCATTACCCCCATCCGCCTCCAGCGCAAGCGCGCGCGCG
CTGCCGCCATGAAGAAGGGCCAGGCGAAAAGCCAGCGTGATGCGTCTGAG
TACGCAAGCCTGTACGCCCAGCGCCAGAAGGAGCAGAAGGAGGCTCGCCG
CTCCATGATCTCCAAGAGGCGTAGCTCTCGCAAGGCTTCCGCCAAGGTCG
TCTCCTAGCCTGTACGCCCAGCGCCAGAAGGAGCAGAAGGAGGCTCGCCG
CTCCATGATCTCCAAGAGGCGTAGCTCTCGCAAGGCTTCCGCCAAGGTCG
TCTCCTAG
back to top