mRNA_M-pyrifera_M_contig86065.20061.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86065.20061.1
Unique NamemRNA_M-pyrifera_M_contig86065.20061.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig86065.20061.1 vs. uniprot
Match: A0A355PGJ6_HALSX (L-fucose:H+ symporter permease n=6 Tax=Bacteria TaxID=2 RepID=A0A355PGJ6_HALSX)

HSP 1 Score: 483 bits (1242), Expect = 9.390e-169
Identity = 252/283 (89.05%), Postives = 270/283 (95.41%), Query Frame = 1
Query:    1 GSNLGVLLAAIFILPHVNPATAVDRAALSQQELESMQSMELQAVMGPYITLALLYIVIAIAIAMVRVPKHEGLVADRKREVVKLPGSRLGRLVKNRRYSFGVVAQFFNVAAQTCTWTFTLHYITENLGVNSTIAGYWLQASLLIFLFSRFIMVGLMGRFDPRMLMTLMCVLGVGLSVFAVISGGFAGAVAIVLLSACISLLFPTIYGIALEGLGQDTKYGAAGLVMAIVGGALIPPLQGWVIDMTSARVSYLVVAGCFLVIVGYGAYVLRNPAPVSSSAEDIA 849
            GSNLGVLLAAIFILPHVNPATAVDRAALSQQELES+QS ELQAVMGPYITLALLYIVIAIAIAMVRVP H  L++DRK + VKLPGSRLGRL+KNRRYSFGVVAQFFNVAAQTC WTFTLHYITENLGV++T+AGYWLQASLL+FLFSRF+MVGLMGRFDPR LMTLMCVLGVGLS+FAVISGG AG+VAIVLLSACISLLFPTIYGIAL GLGQDTKYGAAGLVMAIVGGALIPPLQGWVIDMTSAR+SYLVV GCF+VIVGYG YVLRNPAP S+++ED+A
Sbjct:  142 GSNLGVLLAAIFILPHVNPATAVDRAALSQQELESIQSAELQAVMGPYITLALLYIVIAIAIAMVRVPAHTALMSDRKADAVKLPGSRLGRLLKNRRYSFGVVAQFFNVAAQTCAWTFTLHYITENLGVSNTVAGYWLQASLLVFLFSRFLMVGLMGRFDPRKLMTLMCVLGVGLSLFAVISGGIAGSVAIVLLSACISLLFPTIYGIALTGLGQDTKYGAAGLVMAIVGGALIPPLQGWVIDMTSARISYLVVMGCFMVIVGYGMYVLRNPAPESANSEDLA 424          
BLAST of mRNA_M-pyrifera_M_contig86065.20061.1 vs. uniprot
Match: A0A3N9U093_9GAMM (L-fucose:H+ symporter permease n=10 Tax=Halomonadaceae TaxID=28256 RepID=A0A3N9U093_9GAMM)

HSP 1 Score: 416 bits (1069), Expect = 1.810e-142
Identity = 220/283 (77.74%), Postives = 246/283 (86.93%), Query Frame = 1
Query:    1 GSNLGVLLAAIFILPHVNPATAVDRAALSQQELESMQSMELQAVMGPYITLALLYIVIAIAIAMVRVPKHEGLVADRKREVVKLPGSRLGRLVKNRRYSFGVVAQFFNVAAQTCTWTFTLHYITENLGVNSTIAGYWLQASLLIFLFSRFIMVGLMGRFDPRMLMTLMCVLGVGLSVFAVISGGFAGAVAIVLLSACISLLFPTIYGIALEGLGQDTKYGAAGLVMAIVGGALIPPLQGWVIDMTSARVSYLVVAGCFLVIVGYGAYVLRNPAPVSSSAEDIA 849
            GSNLGVLLAA+FILPHVNPATA  RA+LSQ+ L  MQS ELQAVMGPYITLAL+Y+VIAIAIAMVRVP+HE L+ADRK E V L GSRLGRLV+NRRY+FGVVAQFFNVAAQTCTWTFT+HY+TE LGV S  AGYWLQASLL+FL SRF+MVG+MGR DPR LMT MCVLGV LS+ AV SG   GAVA+VLLSACISLLFPTIYGI+LEGLGQDTKYGAAGLVMAIVGGAL+P  QGW+ID+TSA+ SYLVVA CF VIV +G YV R+P P +S+  D+A
Sbjct:  142 GSNLGVLLAAVFILPHVNPATAEQRASLSQEALAEMQSAELQAVMGPYITLALVYVVIAIAIAMVRVPRHEALMADRKSETVALSGSRLGRLVRNRRYAFGVVAQFFNVAAQTCTWTFTIHYVTEALGVGSEEAGYWLQASLLVFLVSRFVMVGVMGRVDPRKLMTGMCVLGVALSLVAVFSGNLIGAVALVLLSACISLLFPTIYGISLEGLGQDTKYGAAGLVMAIVGGALVPLAQGWLIDITSAQTSYLVVAVCFAVIVAFGIYVQRHPRPETSNEGDLA 424          
BLAST of mRNA_M-pyrifera_M_contig86065.20061.1 vs. uniprot
Match: Q1R0N2_CHRSD (L-fucose permease n=3 Tax=Chromohalobacter salexigens TaxID=158080 RepID=Q1R0N2_CHRSD)

HSP 1 Score: 399 bits (1025), Expect = 1.900e-135
Identity = 209/283 (73.85%), Postives = 246/283 (86.93%), Query Frame = 1
Query:    1 GSNLGVLLAAIFILPHVNPATAVDRAALSQQELESMQSMELQAVMGPYITLALLYIVIAIAIAMVRVPKHEGLVADRKREVVKLPGSRLGRLVKNRRYSFGVVAQFFNVAAQTCTWTFTLHYITENLGVNSTIAGYWLQASLLIFLFSRFIMVGLMGRFDPRMLMTLMCVLGVGLSVFAVISGGFAGAVAIVLLSACISLLFPTIYGIALEGLGQDTKYGAAGLVMAIVGGALIPPLQGWVIDMTSARVSYLVVAGCFLVIVGYGAYVLRNPAPVSSSAEDIA 849
            GSNLGVLLAAIFILP+VNPATA  RA+L+Q+ L  MQS ELQAVMGPY+TLAL+Y+VIAIAIAMVRVP++E L+ADRKR+    PGSRLGRLV+NRRY+FGVVAQFFNVAAQTCTWTFT+HY+ + LGV+ ++AGYWLQASLL+FL SRF+MVG+MGR DPR LMT MCV+GV LS+ AV+SG   GAVA+V LSACISLLFPTIYGI+LEGLGQDTKYGAAGLVMAIVGGAL+P +QGWVID+TSAR+SY+VVA CF VI  +G YV ++P    +S  D+A
Sbjct:  166 GSNLGVLLAAIFILPNVNPATAEQRASLTQEALAEMQSAELQAVMGPYLTLALVYVVIAIAIAMVRVPRYEPLLADRKRDGNMQPGSRLGRLVRNRRYAFGVVAQFFNVAAQTCTWTFTIHYVIQTLGVSDSVAGYWLQASLLVFLVSRFVMVGVMGRVDPRKLMTWMCVIGVVLSLVAVLSGNLLGAVAVVSLSACISLLFPTIYGISLEGLGQDTKYGAAGLVMAIVGGALMPLVQGWVIDITSARISYVVVALCFAVIAAFGVYVQKHPRVGEASDGDLA 448          
BLAST of mRNA_M-pyrifera_M_contig86065.20061.1 vs. uniprot
Match: UPI001CD1E916 (L-fucose:H+ symporter permease n=4 Tax=Halomonas TaxID=2745 RepID=UPI001CD1E916)

HSP 1 Score: 398 bits (1023), Expect = 3.820e-135
Identity = 209/283 (73.85%), Postives = 242/283 (85.51%), Query Frame = 1
Query:    1 GSNLGVLLAAIFILPHVNPATAVDRAALSQQELESMQSMELQAVMGPYITLALLYIVIAIAIAMVRVPKHEGLVADRKREVVKLPGSRLGRLVKNRRYSFGVVAQFFNVAAQTCTWTFTLHYITENLGVNSTIAGYWLQASLLIFLFSRFIMVGLMGRFDPRMLMTLMCVLGVGLSVFAVISGGFAGAVAIVLLSACISLLFPTIYGIALEGLGQDTKYGAAGLVMAIVGGALIPPLQGWVIDMTSARVSYLVVAGCFLVIVGYGAYVLRNPAPVSSSAEDIA 849
            GSNLGVLLAA+FILP+VNPATA  RA+L++  L  MQS ELQAVMGPYITLAL+Y+VIAIAIAMVRVP H+ L+AD+  E  +LPGSR GRL++NRRY+FGVVAQFFNVAAQTCTWTFT+HY+T+ LGV+  +AGYWLQASLL+FL SRF+MVG+MGR DPR LMT MC LGV L + AVISG   GAVAIVLLSACISLLFPTIYGI+LEGLGQDTKYGAAGLVMAIVGGAL+P LQGW+ID+TSA+ SY+VVA CF VIV +G YV R+P    +S  D+A
Sbjct:  166 GSNLGVLLAALFILPNVNPATAEQRASLTRDALAEMQSAELQAVMGPYITLALVYVVIAIAIAMVRVPPHKALMADQPGEKTRLPGSRFGRLIRNRRYAFGVVAQFFNVAAQTCTWTFTIHYVTQTLGVSDGVAGYWLQASLLVFLVSRFVMVGVMGRVDPRRLMTWMCSLGVVLCLVAVISGNLLGAVAIVLLSACISLLFPTIYGISLEGLGQDTKYGAAGLVMAIVGGALMPLLQGWLIDITSAQTSYVVVAACFAVIVAFGIYVQRHPRDKEASEGDLA 448          
BLAST of mRNA_M-pyrifera_M_contig86065.20061.1 vs. uniprot
Match: A0A3N0EC04_9ACTN (L-fucose:H+ symporter permease n=1 Tax=Nocardiopsaceae bacterium YIM 96095 TaxID=2487137 RepID=A0A3N0EC04_9ACTN)

HSP 1 Score: 380 bits (976), Expect = 2.480e-128
Identity = 198/280 (70.71%), Postives = 235/280 (83.93%), Query Frame = 1
Query:    1 GSNLGVLLAAIFILPHVNPATAVDRAALSQQELESMQSMELQAVMGPYITLALLYIVIAIAIAMVRVPKHEGLVADRKREVVKLPGSRLGRLVKNRRYSFGVVAQFFNVAAQTCTWTFTLHYITENLGVNSTIAGYWLQASLLIFLFSRFIMVGLMGRFDPRMLMTLMCVLGVGLSVFAVISGGFAGAVAIVLLSACISLLFPTIYGIALEGLGQDTKYGAAGLVMAIVGGALIPPLQGWVIDMTSARVSYLVVAGCFLVIVGYGAYVLRNPAPVSSSAE 840
            GSNLGVLLAA+FILP+VN ATA +RAAL+Q ELE+M+S ELQAVMGPY+ LA LY+ IA+AIAM +VP    ++AD+    V    SRL RL++NRRYSFGVVAQFFN+AAQTC WTF +HY+ ENLG + + AGYWLQA+LL+FL  RF+MV LMGRFDPR LMTLMCVLGVGLS+ AV+SG   GAVA+VLLSACISLLFPTIYGIAL+GLG DTKYGAAGL+MAIVGGAL+PPL GWVID+++A++S+LVV GCFLVI GYG YVLR P+  +  AE
Sbjct:  142 GSNLGVLLAAVFILPYVNEATADERAALTQTELEAMRSSELQAVMGPYLGLAALYLTIAVAIAMAKVPPRTAMLADQGTGGVWQSRSRLVRLLRNRRYSFGVVAQFFNIAAQTCIWTFIIHYVMENLGASESTAGYWLQATLLVFLVFRFVMVALMGRFDPRKLMTLMCVLGVGLSLVAVVSGNIVGAVAVVLLSACISLLFPTIYGIALQGLGDDTKYGAAGLIMAIVGGALVPPLHGWVIDISTAQLSFLVVTGCFLVITGYGVYVLRAPSGDTPEAE 421          
BLAST of mRNA_M-pyrifera_M_contig86065.20061.1 vs. uniprot
Match: A0A7W7RJ08_9ACTN (FHS family L-fucose permease-like MFS transporter n=1 Tax=Lipingzhangella halophila TaxID=1783352 RepID=A0A7W7RJ08_9ACTN)

HSP 1 Score: 376 bits (966), Expect = 1.660e-126
Identity = 196/271 (72.32%), Postives = 227/271 (83.76%), Query Frame = 1
Query:    1 GSNLGVLLAAIFILPHVNPATAVDRAALSQQELESMQSMELQAVMGPYITLALLYIVIAIAIAMVRVPKHEGLVADRKREVVKLPGSRLGRLVKNRRYSFGVVAQFFNVAAQTCTWTFTLHYITENLGVNSTIAGYWLQASLLIFLFSRFIMVGLMGRFDPRMLMTLMCVLGVGLSVFAVISGGFAGAVAIVLLSACISLLFPTIYGIALEGLGQDTKYGAAGLVMAIVGGALIPPLQGWVIDMTSARVSYLVVAGCFLVIVGYGAYVLRN 813
            GSNLGVLLAA+FILP+VN ATA +RAALSQ ELE+M+S ELQAVMGPY+ LA LYI+IA+AIAM +VP    L+ D++    +  GSRL RL++NRRYS GVVAQFFN+AAQTC WTF +HY+ E LG N   AGYWLQASL+ FL  RF+MV LMGRFDPR LMTLMCVLGV  S+ AV+SG   GAVA+VLLSACISLLFPTIYGIALEGLG DTKYGAAGL+MAIVGGAL+PPL GWVID ++A++S+LVV GCFLVIVGYG YVLR+
Sbjct:  168 GSNLGVLLAAVFILPYVNEATAEERAALSQTELETMRSAELQAVMGPYLGLAALYIIIAVAIAMAKVPPRTSLLPDQQAGAARHSGSRLMRLLRNRRYSLGVVAQFFNIAAQTCIWTFIIHYVMETLGANEATAGYWLQASLIAFLVFRFVMVALMGRFDPRKLMTLMCVLGVVFSLVAVVSGNIVGAVAVVLLSACISLLFPTIYGIALEGLGDDTKYGAAGLIMAIVGGALVPPLHGWVIDNSTAQMSFLVVTGCFLVIVGYGVYVLRS 438          
BLAST of mRNA_M-pyrifera_M_contig86065.20061.1 vs. uniprot
Match: A0A291H2M9_9MICO (L-fucose:H+ symporter permease n=2 Tax=Brachybacterium ginsengisoli TaxID=1331682 RepID=A0A291H2M9_9MICO)

HSP 1 Score: 369 bits (948), Expect = 4.950e-124
Identity = 193/280 (68.93%), Postives = 227/280 (81.07%), Query Frame = 1
Query:    1 GSNLGVLLAAIFILPHVNPATAVDRAALSQQELESMQSMELQAVMGPYITLALLYIVIAIAIAMVRVPKHEGLVADRKREVVKLPGSRLGRLVKNRRYSFGVVAQFFNVAAQTCTWTFTLHYITENLGVNSTIAGYWLQASLLIFLFSRFIMVGLMGRFDPRMLMTLMCVLGVGLSVFAVISGGFAGAVAIVLLSACISLLFPTIYGIALEGLGQDTKYGAAGLVMAIVGGALIPPLQGWVIDMTSARVSYLVVAGCFLVIVGYGAYVLRNPAPVSSSAE 840
            GSNLGVLLAA+ ILP VNP+TA +RAALSQ ELES++S ELQAVMGPYI +A+  +      AMVRVPK+  ++AD +R   +  G+RL RL++NRRYSFGVVAQFFN+AAQ C WTFT+HY+TE LGV+ T AGYWLQASLL+FL  RF+MV LMGRFD R LM LMC LG  LSV AV+SG   GAVAIVLLS CISLLFPTIYG+ALEGLGQDTKYGAAGL+MAIVGGA++P L GWVID++SAR SYLVVA CF V+  YG YVLR P+P ++ +E
Sbjct:  142 GSNLGVLLAAMLILPRVNPSTAEERAALSQDELESIRSSELQAVMGPYIGVAMALVXXXXXXAMVRVPKNPAVMADAERGAEQRIGARLSRLLRNRRYSFGVVAQFFNIAAQICIWTFTIHYVTETLGVDDTRAGYWLQASLLVFLIMRFVMVALMGRFDARKLMVLMCTLGTALSVLAVLSGNIVGAVAIVLLSGCISLLFPTIYGVALEGLGQDTKYGAAGLIMAIVGGAVMPLLHGWVIDISSARTSYLVVAVCFAVVAAYGIYVLRTPSPAAAESE 421          
BLAST of mRNA_M-pyrifera_M_contig86065.20061.1 vs. uniprot
Match: UPI001BAA478A (L-fucose:H+ symporter permease n=1 Tax=Nocardiopsis sp. MG754419 TaxID=2259865 RepID=UPI001BAA478A)

HSP 1 Score: 353 bits (906), Expect = 2.850e-117
Identity = 188/271 (69.37%), Postives = 222/271 (81.92%), Query Frame = 1
Query:    1 GSNLGVLLAAIFILPHVNPATAVDRAALSQQELESMQSMELQAVMGPYITLALLYIVIAIAIAMVRVPKHEGLVADRKREVVKLPGSRLGRLVKNRRYSFGVVAQFFNVAAQTCTWTFTLHYITENLGVNSTIAGYWLQASLLIFLFSRFIMVGLMGRFDPRMLMTLMCVLGVGLSVFAVISGGFAGAVAIVLLSACISLLFPTIYGIALEGLGQDTKYGAAGLVMAIVGGALIPPLQGWVIDMTSARVSYLVVAGCFLVIVGYGAYVLRN 813
            GSNLGVLLA + ILPHVNPA+A +RAALSQ ELE+M+S EL AVMGPY+ LA+LY+VIA +IA+ +VP  E   +        + GSR  RL++NRRYS+GVVAQFFNVAAQTC WTFT+HY+ ENLG + T AG WLQASLL+FL SRF+MV LMGRFD R LMTLMC LGV LS+  V +G   GAV +VLLSACISLLFPTIYGIALE +G+DTKYGAAGLVMAIVGGAL+P L GW++D++SAR+S+LVV GCFLVIVGYG YVLR+
Sbjct:  180 GSNLGVLLAGVLILPHVNPASAEERAALSQSELETMRSAELTAVMGPYVGLAVLYLVIAASIALTKVPVGETRASG---SPGGMSGSRFVRLLRNRRYSYGVVAQFFNVAAQTCIWTFTIHYVMENLGADETTAGRWLQASLLVFLVSRFVMVALMGRFDARRLMTLMCSLGVVLSLVTVTTGNLVGAVCLVLLSACISLLFPTIYGIALERVGEDTKYGAAGLVMAIVGGALVPLLHGWIVDVSSARLSFLVVTGCFLVIVGYGVYVLRD 447          
BLAST of mRNA_M-pyrifera_M_contig86065.20061.1 vs. uniprot
Match: A0A0X8JGW8_ACTRD (L-fucose permease n=2 Tax=Actinomyces radicidentis TaxID=111015 RepID=A0A0X8JGW8_ACTRD)

HSP 1 Score: 330 bits (847), Expect = 1.730e-108
Identity = 176/283 (62.19%), Postives = 214/283 (75.62%), Query Frame = 1
Query:    1 GSNLGVLLAAIFILPHVNPATAVDRAALSQQELESMQSMELQAVMGPYITLALLYIVIAIAIAMVRVPKHEGLVADRKREVVKLPGS--RLGRLVKNRRYSFGVVAQFFNVAAQTCTWTFTLHYITENLGVNSTIAGYWLQASLLIFLFSRFIMVGLMGRFDPRMLMTLMCVLGVGLSVFAVISGGFAGAVAIVLLSACISLLFPTIYGIALEGLGQDTKYGAAGLVMAIVGGALIPPLQGWVIDMTSARVSYLVVAGCFLVIVGYGAYVLRNPAPVSSSAED 843
            GSNLGVL+A +FILPHVNPA+A +RAA+SQQ+L + +S ELQAVMGP++ LA LY+ +A+AI+ VR+         R    V + G   RL RL+ NRRYSFGVVAQFFNVAAQTC WT+TLHY+T  LG++   AGYWLQASLL+FL SRFIMVGLMGR D R LM  MC +GV L  FA++S   AGA+AIVLLSACISLLFPTIYG AL+GLG DTK+GAAGLVMAI+GGA++P +QGWVID +S   SY+VV  CF ++ GYG + LR+  P      D
Sbjct:  165 GSNLGVLIATLFILPHVNPASASERAAMSQQDLLATRSHELQAVMGPFVALACLYLGLALAISRVRISPER-----RASGTVAVAGGSGRLSRLLTNRRYSFGVVAQFFNVAAQTCIWTYTLHYVTSVLGLSDKTAGYWLQASLLVFLVSRFIMVGLMGRIDARKLMVTMCCVGVALVAFAIVSRNLAGAIAIVLLSACISLLFPTIYGEALKGLGDDTKFGAAGLVMAIIGGAIVPLVQGWVIDWSSPAFSYIVVGVCFAIVAGYGVFTLRHSVPADDDTVD 442          
BLAST of mRNA_M-pyrifera_M_contig86065.20061.1 vs. uniprot
Match: F9PJE7_9ACTO (L-fucose:H+ symporter permease n=9 Tax=Actinomyces TaxID=1654 RepID=F9PJE7_9ACTO)

HSP 1 Score: 322 bits (824), Expect = 4.290e-105
Identity = 174/280 (62.14%), Postives = 215/280 (76.79%), Query Frame = 1
Query:    1 GSNLGVLLAAIFILPHVNPATAVDRAALSQQELESMQSMELQAVMGPYITLALLYIVIAIAIAMVRVPKH--EGLVADRKREVVKLPGSRLGRLVKNRRYSFGVVAQFFNVAAQTCTWTFTLHYITENLGVNSTIAGYWLQASLLIFLFSRFIMVGLMGRFDPRMLMTLMCVLGVGLSVFAVISGGFAGAVAIVLLSACISLLFPTIYGIALEGLGQDTKYGAAGLVMAIVGGALIPPLQGWVIDMTSARVSYLVVAGCFLVIVGYGAYVLRNPAPVSSS 834
            GSNLGVLLAA+ ILP VNPATA  R A+S + L + QS EL+AVMGPY+ L LLYI++A+ I  V+V +   E    D        PG RL RL++N+RYSFGVVAQ+FNV+AQTC WT+TLHY+T+ LGV+  IAGYWLQASL++FL  RF+MVGLMGR+D R L+  MC LGVGLS+FA++S    G +AIV LSACISLLFPTIYG AL GLG+DTK+GAAGLVMAI+GGA +P +Q +++D TS  VSY+ VAGCF+V+  YG Y LR P PVS+S
Sbjct:  170 GSNLGVLLAALLILPKVNPATAEQRKAMSHEVLLATQSAELKAVMGPYVALGLLYILLAVMIGRVKVVERPVESAAGDNGG-----PG-RLARLLRNKRYSFGVVAQYFNVSAQTCIWTYTLHYVTDALGVSDKIAGYWLQASLIVFLVFRFLMVGLMGRYDARKLLLFMCTLGVGLSLFAMVSVNILGVLAIVSLSACISLLFPTIYGEALLGLGEDTKFGAAGLVMAIIGGATMPLVQSYIMDKTSPAVSYITVAGCFVVVAAYGVYTLRTPRPVSAS 443          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86065.20061.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A355PGJ6_HALSX9.390e-16989.05L-fucose:H+ symporter permease n=6 Tax=Bacteria Ta... [more]
A0A3N9U093_9GAMM1.810e-14277.74L-fucose:H+ symporter permease n=10 Tax=Halomonada... [more]
Q1R0N2_CHRSD1.900e-13573.85L-fucose permease n=3 Tax=Chromohalobacter salexig... [more]
UPI001CD1E9163.820e-13573.85L-fucose:H+ symporter permease n=4 Tax=Halomonas T... [more]
A0A3N0EC04_9ACTN2.480e-12870.71L-fucose:H+ symporter permease n=1 Tax=Nocardiopsa... [more]
A0A7W7RJ08_9ACTN1.660e-12672.32FHS family L-fucose permease-like MFS transporter ... [more]
A0A291H2M9_9MICO4.950e-12468.93L-fucose:H+ symporter permease n=2 Tax=Brachybacte... [more]
UPI001BAA478A2.850e-11769.37L-fucose:H+ symporter permease n=1 Tax=Nocardiopsi... [more]
A0A0X8JGW8_ACTRD1.730e-10862.19L-fucose permease n=2 Tax=Actinomyces radicidentis... [more]
F9PJE7_9ACTO4.290e-10562.14L-fucose:H+ symporter permease n=9 Tax=Actinomyces... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86065contigM-pyrifera_M_contig86065:3..854 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score401.0
Seed ortholog evalue4.7e-109
Seed eggNOG ortholog290398.Csal_0364
Preferred namefucP
KEGG koko:K02429
KEGG TC2.A.1.7
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Major Facilitator Superfamily
EggNOG OGs1MXDC@1224,1RQX9@1236,1XNTX@135619,COG0738@1,COG0738@2
COG Functional cat.G
Best tax levelOceanospirillales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons1
Model size852
Cds size852
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816771.2577045-CDS-M-pyrifera_M_contig86065:2..8541622816771.2577045-CDS-M-pyrifera_M_contig86065:2..854Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86065 3..854 +
1692278168.8173897-CDS-M-pyrifera_M_contig86065:2..8541692278168.8173897-CDS-M-pyrifera_M_contig86065:2..854Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86065 3..854 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86065.20061.1prot_M-pyrifera_M_contig86065.20061.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86065 3..854 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86065.20061.1

>prot_M-pyrifera_M_contig86065.20061.1 ID=prot_M-pyrifera_M_contig86065.20061.1|Name=mRNA_M-pyrifera_M_contig86065.20061.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=284bp
GSNLGVLLAAIFILPHVNPATAVDRAALSQQELESMQSMELQAVMGPYIT
LALLYIVIAIAIAMVRVPKHEGLVADRKREVVKLPGSRLGRLVKNRRYSF
GVVAQFFNVAAQTCTWTFTLHYITENLGVNSTIAGYWLQASLLIFLFSRF
IMVGLMGRFDPRMLMTLMCVLGVGLSVFAVISGGFAGAVAIVLLSACISL
LFPTIYGIALEGLGQDTKYGAAGLVMAIVGGALIPPLQGWVIDMTSARVS
YLVVAGCFLVIVGYGAYVLRNPAPVSSSAEDIA*
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mRNA from alignment at M-pyrifera_M_contig86065:3..854+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86065.20061.1 ID=mRNA_M-pyrifera_M_contig86065.20061.1|Name=mRNA_M-pyrifera_M_contig86065.20061.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=852bp|location=Sequence derived from alignment at M-pyrifera_M_contig86065:3..854+ (Macrocystis pyrifera P11B4 male)
GGTTCTAACCTGGGCGTGTTGTTAGCCGCCATCTTCATACTTCCCCACGT CAATCCAGCCACCGCAGTAGATCGTGCTGCTCTGTCTCAACAAGAACTTG AGAGCATGCAGTCAATGGAGCTGCAGGCAGTGATGGGGCCCTATATCACT CTGGCATTACTCTATATTGTCATCGCGATTGCCATCGCGATGGTGCGGGT GCCGAAACATGAGGGGCTGGTCGCGGATAGGAAGAGGGAAGTGGTGAAGC TGCCAGGTAGTCGTTTGGGTAGATTGGTGAAGAATCGGCGCTACTCTTTC GGTGTTGTCGCTCAGTTCTTCAATGTAGCCGCCCAAACTTGCACGTGGAC CTTCACGCTCCACTACATCACGGAAAATCTTGGGGTTAACAGCACTATAG CAGGATACTGGCTACAGGCTTCGCTGCTGATCTTCCTGTTTTCCCGTTTC ATCATGGTGGGCCTGATGGGGCGCTTCGACCCTCGTATGTTAATGACGCT CATGTGCGTGCTTGGCGTAGGGTTGTCTGTATTTGCCGTGATCAGCGGCG GCTTCGCTGGCGCTGTCGCTATCGTGCTGTTAAGTGCCTGCATTTCACTT CTGTTTCCCACTATTTATGGCATCGCGCTCGAGGGTCTCGGCCAAGACAC CAAGTATGGTGCGGCGGGGCTGGTCATGGCGATAGTAGGTGGGGCGCTTA TCCCGCCGCTGCAAGGGTGGGTTATCGACATGACTTCAGCCCGAGTTAGC TATTTGGTAGTGGCTGGCTGCTTCCTGGTTATCGTTGGTTATGGTGCCTA TGTCCTGCGCAATCCTGCCCCAGTGTCGTCCAGCGCTGAAGATATAGCCT AG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86065:3..854+

>mRNA_M-pyrifera_M_contig86065.20061.1 ID=mRNA_M-pyrifera_M_contig86065.20061.1|Name=mRNA_M-pyrifera_M_contig86065.20061.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1704bp|location=Sequence derived from alignment at M-pyrifera_M_contig86065:3..854+ (Macrocystis pyrifera P11B4 male)
GGTTCTAACCTGGGCGTGTTGTTAGCCGCCATCTTCATACTTCCCCACGT
CAATCCAGCCACCGCAGTAGATCGTGCTGCTCTGTCTCAACAAGAACTTG
AGAGCATGCAGTCAATGGAGCTGCAGGCAGTGATGGGGCCCTATATCACT
CTGGCATTACTCTATATTGTCATCGCGATTGCCATCGCGATGGTGCGGGT
GCCGAAACATGAGGGGCTGGTCGCGGATAGGAAGAGGGAAGTGGTGAAGC
TGCCAGGTAGTCGTTTGGGTAGATTGGTGAAGAATCGGCGCTACTCTTTC
GGTGTTGTCGCTCAGTTCTTCAATGTAGCCGCCCAAACTTGCACGTGGAC
CTTCACGCTCCACTACATCACGGAAAATCTTGGGGTTAACAGCACTATAG
CAGGATACTGGCTACAGGCTTCGCTGCTGATCTTCCTGTTTTCCCGTTTC
ATCATGGTGGGCCTGATGGGGCGCTTCGACCCTCGTATGTTAATGACGCT
CATGTGCGTGCTTGGCGTAGGGTTGTCTGTATTTGCCGTGATCAGCGGCG
GCTTCGCTGGCGCTGTCGCTATCGTGCTGTTAAGTGCCTGCATTTCACTT
CTGTTTCCCACTATTTATGGCATCGCGCTCGAGGGTCTCGGCCAAGACAC
CAAGTATGGTGCGGCGGGGCTGGTCATGGCGATAGTAGGTGGGGCGCTTA
TCCCGCCGCTGCAAGGGTGGGTTATCGACATGACTTCAGCCCGAGTTAGC
TATTTGGTAGTGGCTGGCTGCTTCCTGGTTATCGTTGGTTATGGTGCCTA
TGTCCTGCGCAATCCTGCCCCAGTGTCGTCCAGCGCTGAAGATATAGCCT
AGGGTTCTAACCTGGGCGTGTTGTTAGCCGCCATCTTCATACTTCCCCAC
GTCAATCCAGCCACCGCAGTAGATCGTGCTGCTCTGTCTCAACAAGAACT
TGAGAGCATGCAGTCAATGGAGCTGCAGGCAGTGATGGGGCCCTATATCA
CTCTGGCATTACTCTATATTGTCATCGCGATTGCCATCGCGATGGTGCGG
GTGCCGAAACATGAGGGGCTGGTCGCGGATAGGAAGAGGGAAGTGGTGAA
GCTGCCAGGTAGTCGTTTGGGTAGATTGGTGAAGAATCGGCGCTACTCTT
TCGGTGTTGTCGCTCAGTTCTTCAATGTAGCCGCCCAAACTTGCACGTGG
ACCTTCACGCTCCACTACATCACGGAAAATCTTGGGGTTAACAGCACTAT
AGCAGGATACTGGCTACAGGCTTCGCTGCTGATCTTCCTGTTTTCCCGTT
TCATCATGGTGGGCCTGATGGGGCGCTTCGACCCTCGTATGTTAATGACG
CTCATGTGCGTGCTTGGCGTAGGGTTGTCTGTATTTGCCGTGATCAGCGG
CGGCTTCGCTGGCGCTGTCGCTATCGTGCTGTTAAGTGCCTGCATTTCAC
TTCTGTTTCCCACTATTTATGGCATCGCGCTCGAGGGTCTCGGCCAAGAC
ACCAAGTATGGTGCGGCGGGGCTGGTCATGGCGATAGTAGGTGGGGCGCT
TATCCCGCCGCTGCAAGGGTGGGTTATCGACATGACTTCAGCCCGAGTTA
GCTATTTGGTAGTGGCTGGCTGCTTCCTGGTTATCGTTGGTTATGGTGCC
TATGTCCTGCGCAATCCTGCCCCAGTGTCGTCCAGCGCTGAAGATATAGC
CTAG
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