prot_M-pyrifera_M_contig8605.20055.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig8605.20055.1
Unique Name	prot_M-pyrifera_M_contig8605.20055.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	575

Homology

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BLAST of mRNA_M-pyrifera_M_contig8605.20055.1 vs. uniprot
Match: D7FWK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK2_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 4.900e-42
Identity = 107/171 (62.57%), Postives = 136/171 (79.53%), Query Frame = 0

Query:  386 GEGKGEAVQEVREKLSLLVKAFEKKSNSLNGRLTSTASEKAALQTCRASVANANAEGIRRLAEAETEQQRLADAEEYEKAAELSMEIESLREESASSERRLRELEQEEASLEKVSSECRQDLLGAISDAAESFKAFQRVQDADLGKLVAERAAKFEAESRRMNTEAERIAL 556
            GE +  AVQE+R +LS+L+ AF++KS SL+ RLT  A+EKAAL+  R S+ N++AEGIRRLAEAE+EQQRLAD E+YEKAAELS+EIE+L+EESAS+ RRLRELE++  SL++ S+E R +LL A+ +     K FQ  QDA LGKLV+ERAA FE E+RRMNTE ERI L
Sbjct:  480 GEEENGAVQEMRAELSVLIDAFQQKSESLSNRLTEAAAEKAALECSRTSLRNSHAEGIRRLAEAESEQQRLADEEDYEKAAELSLEIENLKEESASAARRLRELEEDGGSLDRSSAEARHELLVAVEETTRGLKVFQGRQDAKLGKLVSERAALFEEENRRMNTEQERIVL 650

[Close]

BLAST of mRNA_M-pyrifera_M_contig8605.20055.1 vs. uniprot
Match: A0A6H5J4P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4P3_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 4.720e-27
Identity = 95/195 (48.72%), Postives = 120/195 (61.54%), Query Frame = 0

Query:  361 DDATPGSSIRS-VAPSGTGGGGEDV------GGEGKGEAVQEVREKLSLLVKAFEKKSNSLNGRLTSTASEKAALQTCRASVANANAEGIRRLAEAETEQQRLADAEEYEKAAELSMEIESLREESASSERRLR-----------------------ELEQEEASLEKVSSECRQDLLGAISDAAESFKAFQRVQ 525
            +D  P  S R    P    GGG  V      GGE  G AVQE+R +LS+L+ AF++KS SL+ RLT  A EKAAL+  R S+ +++AEGIRRLAEAE EQQRLAD E+YEKAAELS+EIE+LREESAS+ RRLR                       ELE++  SL++ S+E RQ+LL A+ +     K FQ  Q
Sbjct:  144 EDHPPSRSERGGTDPDSAAGGGSSVVRPAFSGGEENG-AVQEMRAELSVLIDAFQQKSESLSNRLTEVAVEKAALECSRTSLGSSHAEGIRRLAEAEFEQQRLADEEDYEKAAELSLEIENLREESASAARRLRRVIRSRDDTEESMRKALALTTPLELEEDGGSLDRSSAEARQELLAAVEETTRGLKVFQGKQ 337

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig8605.20055.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig8605.20055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FWK2_ECTSI	4.900e-42	62.57	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5J4P3_9PHAE	4.720e-27	48.72	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 458..506

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig8605	contig	M-pyrifera_M_contig8605:667..8180 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig8605.20055.1	mRNA_M-pyrifera_M_contig8605.20055.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig8605 667..8180 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig8605.20055.1 ID=prot_M-pyrifera_M_contig8605.20055.1|Name=mRNA_M-pyrifera_M_contig8605.20055.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=575bp
SSFSFLSEGGKGHDAGLGGVGGGGGGGSGEGGAGLADPSSVAATASSPDD
RASALDGGGGGEGGGVTKGGGDIGSSGRGSPSPSSLGRPSAESVITAGSP
PAGSQSALTAAAAVVAAGGMGATGGSGAGMGAAVPAWKTSGGVVRKKRTA
RRVGYARDETTVAATTAAASTTTTTTATAASGLSSPETPSVGGEGTAGAA
GGESSLGGGGYAREDGGGVGYEAPPVTSVVSRKAAVVEAEGRGGGGSMDD
SVVAEAAAMAALAAAMAPGDIKQGSSHGTVSSTSSHSGGPPTAGGLSGGQ
GGSLRKNNSFISKASKTHKRSHHHSNSSSKPEGPPRSSARITPSSSDTKE
GSSHALPPPHDDATPGSSIRSVAPSGTGGGGEDVGGEGKGEAVQEVREKL
SLLVKAFEKKSNSLNGRLTSTASEKAALQTCRASVANANAEGIRRLAEAE
TEQQRLADAEEYEKAAELSMEIESLREESASSERRLRELEQEEASLEKVS
SECRQDLLGAISDAAESFKAFQRVQDADLGKLVAERAAKFEAESRRMNTE
AERIALEKTHVERDCAHLEVLLPV*