mRNA_M-pyrifera_M_contig85988.20041.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85988.20041.1 vs. uniprot
Match: A0A8F4J920_9ACTN (Methyltransferase domain-containing protein n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4J920_9ACTN) HSP 1 Score: 129 bits (324), Expect = 9.020e-34 Identity = 61/111 (54.95%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 1 RAPEHAMIHESVGFTDLVKRATVKASEISASEYRAGLVRLNSLFGWVAPQIVIVAGLTGWRHAVGEKRLAGWQPDHLGGRPVYLMPNPSGLNASTSLDDLIGHLRTALKGP 333 R P H + H+ VG TDLVKRAT +A E+ +EYR GL RL+ L W+ P V V GL GWR AV K + GWQ +GG PVY++P+ SGLNA TSL DL+GHL A GP Sbjct: 258 RDPRHLLRHDHVGMTDLVKRATARADELRTAEYREGLERLDQLCAWLQPAAVAVVGLAGWRAAVDRKAVVGWQERAVGGSPVYVLPSTSGLNAGTSLADLVGHLLAAADGP 368
BLAST of mRNA_M-pyrifera_M_contig85988.20041.1 vs. uniprot
Match: A0A2D8LU89_9ACTN (UDG domain-containing protein (Fragment) n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LU89_9ACTN) HSP 1 Score: 123 bits (309), Expect = 5.460e-33 Identity = 58/111 (52.25%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 1 RAPEHAMIHESVGFTDLVKRATVKASEISASEYRAGLVRLNSLFGWVAPQIVIVAGLTGWRHAVGEKRLAGWQPDHLGGRPVYLMPNPSGLNASTSLDDLIGHLRTALKGP 333 R P HA+ H +G TDLVKRAT +A E++ EYR GL R+ L W+ P+ V GL GWR A GWQ LGG PVY+MP+ SGLNA +SL DL HLR A GP Sbjct: 106 REPRHALAHHGMGMTDLVKRATPRADELTTDEYRTGLARVEQLCAWLRPEAVCFVGLAGWRAAADRTATPGWQESDLGGSPVYVMPSTSGLNAHSSLADLTDHLRHAATGP 216
BLAST of mRNA_M-pyrifera_M_contig85988.20041.1 vs. uniprot
Match: A0A2E6ZG21_9ACTN (Mismatch-specific DNA-glycosylase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E6ZG21_9ACTN) HSP 1 Score: 121 bits (303), Expect = 1.340e-32 Identity = 61/110 (55.45%), Postives = 79/110 (71.82%), Query Frame = 1 Query: 1 RAPEHAMIHESVGFTDLVKRATVKASEISASEYRAGLVRLNSLFGWVAPQIVIVAGLTGWRHAVGEKRLA-GWQPDHLGGRPVYLMPNPSGLNASTSLDDLIGHLRTALK 327 R PEHA+ + VG TDLVKRA+ +ASEI+ EY+ GL RL+ L W++P+IV V G+TGWR A+ + L G QP LGGRPV+++PNPSGLNA TS DL+ RT L+ Sbjct: 61 RDPEHALKQDRVGMTDLVKRASTRASEITKVEYQEGLARLDRLCRWLSPEIVCVLGITGWRAALEARHLVMGEQPTKLGGRPVHVLPNPSGLNAHTSHADLVKRFRTLLE 170
BLAST of mRNA_M-pyrifera_M_contig85988.20041.1 vs. uniprot
Match: A0A2D6U6M2_9ACTN (Uncharacterized protein n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U6M2_9ACTN) HSP 1 Score: 122 bits (305), Expect = 4.850e-31 Identity = 57/109 (52.29%), Postives = 68/109 (62.39%), Query Frame = 1 Query: 7 PEHAMIHESVGFTDLVKRATVKASEISASEYRAGLVRLNSLFGWVAPQIVIVAGLTGWRHAVGEKRLAGWQPDHLGGRPVYLMPNPSGLNASTSLDDLIGHLRTALKGP 333 P HA+ H +G TDLVKRAT +A E++ EYR GL R+ L W+ P+ V GL GWR A GWQ LGG PVY+MP+ SGLNA +SL DL HLR A GP Sbjct: 252 PRHALAHHGMGMTDLVKRATPRADELTTDEYRTGLARVEQLCAWLRPEAVCFVGLAGWRAAADRTATPGWQESDLGGSPVYVMPSTSGLNAHSSLADLTDHLRHAATGP 360
BLAST of mRNA_M-pyrifera_M_contig85988.20041.1 vs. uniprot
Match: A0A3S0D7A8_9ACTN (Mismatch-specific DNA-glycosylase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A3S0D7A8_9ACTN) HSP 1 Score: 116 bits (290), Expect = 7.070e-31 Identity = 59/110 (53.64%), Postives = 71/110 (64.55%), Query Frame = 1 Query: 1 RAPEHAMIHESVGFTDLVKRATVKASEISASEYRAGLVRLNSLFGWVAPQIVIVAGLTGWRHAVGEKRLA-GWQPDHLGGRPVYLMPNPSGLNASTSLDDLIGHLRTALK 327 R P H + H +G TDLVKR T A E+ A E+R GL RL+ L W+ P V V G+TGWR A G + G Q LGGRPVY+MPNPSGLNA T +DDL+ HLR A + Sbjct: 42 RDPLHLLRHAGIGMTDLVKRTTATAGELRAEEFRDGLERLDVLCDWLQPTAVCVLGITGWRAATGARSARLGPQAATLGGRPVYVMPNPSGLNAHTDVDDLVRHLRAATE 151
BLAST of mRNA_M-pyrifera_M_contig85988.20041.1 vs. uniprot
Match: A0A351EVH7_9ACTN (Mismatch-specific DNA-glycosylase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351EVH7_9ACTN) HSP 1 Score: 114 bits (286), Expect = 8.480e-31 Identity = 55/110 (50.00%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 1 RAPEHAMIHESVGFTDLVKRATVKASEISASEYRAGLVRLNSLFGWVAPQIVIVAGLTGWRHAVGEKRLAGWQPDHLGGRPVYLMPNPSGLNASTSLDDLIGHLRTALKG 330 R P A+ +G TD+VKRAT +A E+ SEY AG RL L W+ P+ + + GL GWR AV K GWQP+ +GGRPVYLMP+ SGLNA ++D L HL A G Sbjct: 1 RDPAQALAAHGMGMTDMVKRATRRADELDKSEYLAGFERLGKLAEWLEPKTICMVGLAGWRAAVNRKAQRGWQPETVGGRPVYLMPSTSGLNAHDTVDTLAEHLSVAAAG 110
BLAST of mRNA_M-pyrifera_M_contig85988.20041.1 vs. uniprot
Match: A0A7K2ED29_9ACTN (Methyltransferase domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2ED29_9ACTN) HSP 1 Score: 119 bits (297), Expect = 7.090e-30 Identity = 62/107 (57.94%), Postives = 71/107 (66.36%), Query Frame = 1 Query: 1 RAPEHAMIHESVGFTDLVKRATVKASEISASEYRAGLVRLNSLFGWVAPQIVIVAGLTGWRHAVGEKRLAGWQPDHLGGRPVYLMPNPSGLNASTSLDDLIGHLRTA 321 R P HA++ VG TDLVKRAT KA+E+SA+EY AGL RL L + P IV GL GWR AV + G Q H+GGRP YLMP+ SGLNA TSL DL HLR A Sbjct: 250 RDPRHALVAHGVGMTDLVKRATRKAAELSAAEYAAGLERLERLAERLEPGIVCFVGLAGWRAAVDRRASPGPQSRHIGGRPAYLMPSTSGLNARTSLQDLTAHLRAA 356
BLAST of mRNA_M-pyrifera_M_contig85988.20041.1 vs. uniprot
Match: UPI001D0FC5A9 (methyltransferase domain-containing protein n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D0FC5A9) HSP 1 Score: 119 bits (298), Expect = 8.930e-30 Identity = 61/119 (51.26%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 1 RAPEHAMIHESVGFTDLVKRATVKASEISASEYRAGLVRLNSLFGWVAPQIVIVAGLTGWRHAVGEKRLA-GWQPDHLGGRPVYLMPNPSGLNASTSLDDLIGHLRTALK-----GPPA 339 R P H + H+++G +DLVKRAT A E+ E+R G RL++L W+ P V V G+TGWR A G++ A G Q LGGRPV++MPNPSGLNA TS+ DL HLR AL+ GPP+ Sbjct: 263 RDPVHLLRHQAIGMSDLVKRATATAKELRPEEFRLGFERLDALCAWLRPGAVCVLGVTGWRDATGDRHAALGRQERTLGGRPVHVMPNPSGLNAHTSVADLADHLRAALELGAAVGPPS 381
BLAST of mRNA_M-pyrifera_M_contig85988.20041.1 vs. uniprot
Match: UPI001C63B102 (methyltransferase domain-containing protein n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C63B102) HSP 1 Score: 117 bits (292), Expect = 4.540e-29 Identity = 56/112 (50.00%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 1 RAPEHAMIHESVGFTDLVKRATVKASEISASEYRAGLVRLNSLFGWVAPQIVIVAGLTGWRHAVGEKRLAGWQPDHLGGRPVYLMPNPSGLNASTSLDDLIGHLRTALKGPP 336 R P + +G TDLVKRAT +AS+++ +EYRAG+ RL+ L +AP+ V++ GL GWR GWQ HLG PVY+MP+ SGLNA TS DL+ HLR A GPP Sbjct: 256 RDPWRLLATGGIGMTDLVKRATPRASDLTTAEYRAGVARLDRLCTMLAPEAVLLVGLAGWRAGADRAATPGWQARHLGASPVYVMPSTSGLNAGTSRADLVAHLRAAAIGPP 367
BLAST of mRNA_M-pyrifera_M_contig85988.20041.1 vs. uniprot
Match: A0A2D6FTN6_9ACTN (UDG domain-containing protein n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6FTN6_9ACTN) HSP 1 Score: 113 bits (282), Expect = 5.410e-29 Identity = 55/102 (53.92%), Postives = 74/102 (72.55%), Query Frame = 1 Query: 1 RAPEHAMIHESVGFTDLVKRATVKASEISASEYRAGLVRLNSLFGWVAPQIVIVAGLTGWRHAVGEKRLA-GWQPDHLGGRPVYLMPNPSGLNASTSLDDLI 303 R P HA+ H +G +DLVKRA+ KAS IS +EY+AG+ RL+ L GW++P +V V G+TGWR A+ ++ L G Q LGGR VY++PNPSGLNA T+ DL+ Sbjct: 95 RDPVHALKHHRIGMSDLVKRASTKASAISGAEYQAGVARLDRLCGWLSPGVVCVLGITGWRSALNDRDLRLGKQTIRLGGRTVYVLPNPSGLNAHTNHGDLV 196 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85988.20041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85988.20041.1 >prot_M-pyrifera_M_contig85988.20041.1 ID=prot_M-pyrifera_M_contig85988.20041.1|Name=mRNA_M-pyrifera_M_contig85988.20041.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp MIHESVGFTDLVKRATVKASEISASEYRAGLVRLNSLFGWVAPQIVIVAGback to top mRNA from alignment at M-pyrifera_M_contig85988:506..853- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85988.20041.1 ID=mRNA_M-pyrifera_M_contig85988.20041.1|Name=mRNA_M-pyrifera_M_contig85988.20041.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=348bp|location=Sequence derived from alignment at M-pyrifera_M_contig85988:506..853- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85988:506..853- >mRNA_M-pyrifera_M_contig85988.20041.1 ID=mRNA_M-pyrifera_M_contig85988.20041.1|Name=mRNA_M-pyrifera_M_contig85988.20041.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig85988:506..853- (Macrocystis pyrifera P11B4 male)back to top |