mRNA_M-pyrifera_M_contig85985.20039.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85985.20039.1
Unique NamemRNA_M-pyrifera_M_contig85985.20039.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85985.20039.1 vs. uniprot
Match: A0A7Y2DQG5_9ACTN (GTPase HflX n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DQG5_9ACTN)

HSP 1 Score: 415 bits (1067), Expect = 1.730e-142
Identity = 220/282 (78.01%), Postives = 244/282 (86.52%), Query Frame = 1
Query:    1 GKGKVDEILESALMFDADTVVFDDELTPAQQFNLERILKRTALDRTAVILDIFAQHATSMEGKTQVELAQLRYNLPRLRGKKDFSQQAGGIGTRGPGETQIEVDRRRLVRRMHKLERDLRDITDRRANQRKARRRSPFRSVSIVGYTNAGKSTLLNAITGAEVKIEDRLFATLDPTTRQTQLPGGETILMTDTVGFVKKLPHQLVEAFKSTLEVAAEVDLLVHVVDASGPDPDGHMHAVRTVLSEIGAVEVPELLIFNKADLDPIAAERLVRHHPGSVAVSA 846
            GKGKVDEILE+AL  DADTVVFDDELTPAQ FNLE+IL RTALDRTAVILDIFAQHATS EGKTQVELAQLRYNLPRLRGKK FSQQAGGIGTRGPGETQ+EVDRRRL+RR+HKLERDL+ I+ RR NQRKAR RSP+  VSIVGYTNAGKSTLL  +TGA+VK+ED+LFAT+DPTTR+ +LPGGE IL+TDTVGFVKKLPH LVEAFKSTLEVAA  DLL+HVVD +GPDPD H+ AVR VL  IGA EV +LL+FNK D      +RLV  + GSV +SA
Sbjct:   47 GKGKVDEILETALAHDADTVVFDDELTPAQGFNLEKILGRTALDRTAVILDIFAQHATSTEGKTQVELAQLRYNLPRLRGKKSFSQQAGGIGTRGPGETQLEVDRRRLLRRIHKLERDLKAISGRRENQRKARHRSPYSVVSIVGYTNAGKSTLLRTLTGADVKVEDQLFATVDPTTRKLRLPGGEQILLTDTVGFVKKLPHTLVEAFKSTLEVAAGADLLLHVVDGAGPDPDAHIMAVREVLEGIGAGEVEQLLVFNKMDASE-EVKRLVDLNEGSVGISA 327          
BLAST of mRNA_M-pyrifera_M_contig85985.20039.1 vs. uniprot
Match: A0A7Y2IHT3_9ACTN (GTPase HflX n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IHT3_9ACTN)

HSP 1 Score: 416 bits (1069), Expect = 8.920e-142
Identity = 220/282 (78.01%), Postives = 241/282 (85.46%), Query Frame = 1
Query:    1 GKGKVDEILESALMFDADTVVFDDELTPAQQFNLERILKRTALDRTAVILDIFAQHATSMEGKTQVELAQLRYNLPRLRGKKDFSQQAGGIGTRGPGETQIEVDRRRLVRRMHKLERDLRDITDRRANQRKARRRSPFRSVSIVGYTNAGKSTLLNAITGAEVKIEDRLFATLDPTTRQTQLPGGETILMTDTVGFVKKLPHQLVEAFKSTLEVAAEVDLLVHVVDASGPDPDGHMHAVRTVLSEIGAVEVPELLIFNKADLDPIAAERLVRHHPGSVAVSA 846
            GKGKV+EIL  AL  DADTVVFDDELTPAQQFNLE+IL R+ALDRTAVILDIFAQHATS EGKTQVELAQLRYNLPRLRGKK FSQQ GGIGTRGPGETQ+E DRRRLVRR+HKLERDLR I+DRR NQRKAR RSP+  VSIVGYTNAGKSTLL  +T AEVK+ D+LFAT+DPTTR+  LPGGE IL+TDTVGFVKKLPH LVEAFKSTLEVAA  DLLVHVVD +G DPDGH+ AVR VL  IGA EV +LL+FNK D  P   +R+V  +PGSV +SA
Sbjct:  116 GKGKVEEILNKALELDADTVVFDDELTPAQQFNLEKILGRSALDRTAVILDIFAQHATSSEGKTQVELAQLRYNLPRLRGKKAFSQQGGGIGTRGPGETQLETDRRRLVRRIHKLERDLRSISDRRENQRKARHRSPYSVVSIVGYTNAGKSTLLKCLTSAEVKVADQLFATVDPTTRKFGLPGGEQILLTDTVGFVKKLPHTLVEAFKSTLEVAASADLLVHVVDGAGVDPDGHILAVREVLQSIGAGEVEQLLVFNKLDASP-EVKRMVDLNPGSVGISA 396          
BLAST of mRNA_M-pyrifera_M_contig85985.20039.1 vs. uniprot
Match: A0A2E0EH05_9ACTN (GTPase HflX n=8 Tax=Actinobacteria TaxID=201174 RepID=A0A2E0EH05_9ACTN)

HSP 1 Score: 378 bits (970), Expect = 4.840e-127
Identity = 204/286 (71.33%), Postives = 236/286 (82.52%), Query Frame = 1
Query:    1 GKGKVDEILESALMFDADTVVFDDELTPAQQFNLERILKRTALDRTAVILDIFAQHATSMEGKTQVELAQLRYNLPRLRGK-KDFSQQAGGIGTRGPGETQIEVDRRRLVRRMHKLERDLRDITDRRANQRKARRRSPFRSVSIVGYTNAGKSTLLNAITGAEVKIEDRLFATLDPTTRQTQLPGGETILMTDTVGFVKKLPHQLVEAFKSTLEVAAEVDLLVHVVDASGPDPDGHMHAVRTVLSEIGAVEVPELLIFNKAD-LDPIAAERLVRHHPGSVAVSAAS 852
            GKGK  EI  ++   DADTVVFDDEL+P QQFNLE+ILKRTALDRTAVILDIFAQ+AT++EGKTQVELAQLRY+LPRLRG+    SQQAGGIGTRGPGETQ+EVDRRR+ RR+ KLE+DL  +   R NQRK+RRRS F +V+IVGYTNAGKSTLLN +TGAEV +EDRLFATLD TTR+ QLPGGET+LMTDTVGF++KLP  LVEAFKSTLE  AE DLL+HVVD +GPDP+G M AVR VL EIGA +VPEL+ FNKAD +     + L+  H GS+A SA S
Sbjct:   88 GKGKAAEIQATSEGLDADTVVFDDELSPGQQFNLEKILKRTALDRTAVILDIFAQNATTLEGKTQVELAQLRYHLPRLRGRGNQLSQQAGGIGTRGPGETQLEVDRRRIQRRLAKLEKDLSGLRRTRRNQRKSRRRSRFHTVAIVGYTNAGKSTLLNQLTGAEVLVEDRLFATLDATTRRLQLPGGETVLMTDTVGFIQKLPTGLVEAFKSTLEEVAEADLLLHVVDGAGPDPEGQMAAVRAVLREIGAGDVPELVAFNKADQVKAGGLDHLLLGHEGSIAFSARS 373          
BLAST of mRNA_M-pyrifera_M_contig85985.20039.1 vs. uniprot
Match: A0A2A5YUJ9_9ACTN (GTPase HflX n=4 Tax=Acidimicrobiales TaxID=84993 RepID=A0A2A5YUJ9_9ACTN)

HSP 1 Score: 377 bits (967), Expect = 1.380e-126
Identity = 201/284 (70.77%), Postives = 236/284 (83.10%), Query Frame = 1
Query:    1 GKGKVDEILESALMFDADTVVFDDELTPAQQFNLERILKRTALDRTAVILDIFAQHATSMEGKTQVELAQLRYNLPRLRGK-KDFSQQAGGIGTRGPGETQIEVDRRRLVRRMHKLERDLRDITDRRANQRKARRRSPFRSVSIVGYTNAGKSTLLNAITGAEVKIEDRLFATLDPTTRQTQLPGGETILMTDTVGFVKKLPHQLVEAFKSTLEVAAEVDLLVHVVDASGPDPDGHMHAVRTVLSEIGAVEVPELLIFNKAD-LDPIAAERLVRHHPGSVAVSA 846
            GKGK  EI E++   DADTVVFDDEL+PAQQFNLE+ILKRTALDRTAVILDIFAQ+AT++EGK QVELAQL+YNLPRLRG+    SQQ GGIGTRGPGETQ+EVDRRR+ RR+ KLE+DL  +   R NQRK+RRRS F +V+IVGYTNAGKSTLLN +TGA V +EDRLFATLD TTR+ QLPGGET+LMTDTVGF++KLP  LVEAFKSTLE  AE DLLVHVVD +GPDP+G M AVR+VL +IGA +VPEL+ FNK+D +     + L+  H GS+A+SA
Sbjct:   88 GKGKATEIQETSDGVDADTVVFDDELSPAQQFNLEKILKRTALDRTAVILDIFAQNATTLEGKAQVELAQLKYNLPRLRGRGNQLSQQGGGIGTRGPGETQLEVDRRRIQRRLAKLEKDLSGLRRTRKNQRKSRRRSRFHTVAIVGYTNAGKSTLLNRLTGAGVLVEDRLFATLDATTRRLQLPGGETVLMTDTVGFIQKLPTGLVEAFKSTLEEVAEADLLVHVVDGAGPDPEGQMTAVRSVLRDIGAGDVPELIAFNKSDQVKDEGLQHLLHRHEGSLALSA 371          
BLAST of mRNA_M-pyrifera_M_contig85985.20039.1 vs. uniprot
Match: A0A2E7T1W6_9ACTN (GTPase HflX n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A2E7T1W6_9ACTN)

HSP 1 Score: 376 bits (966), Expect = 2.020e-126
Identity = 202/284 (71.13%), Postives = 236/284 (83.10%), Query Frame = 1
Query:    1 GKGKVDEILESALMFDADTVVFDDELTPAQQFNLERILKRTALDRTAVILDIFAQHATSMEGKTQVELAQLRYNLPRLRGKKD-FSQQAGGIGTRGPGETQIEVDRRRLVRRMHKLERDLRDITDRRANQRKARRRSPFRSVSIVGYTNAGKSTLLNAITGAEVKIEDRLFATLDPTTRQTQLPGGETILMTDTVGFVKKLPHQLVEAFKSTLEVAAEVDLLVHVVDASGPDPDGHMHAVRTVLSEIGAVEVPELLIFNKAD-LDPIAAERLVRHHPGSVAVSA 846
            GKGK  EI E++   DADTVVFDDEL+PAQQFNLE+ILKRTALDRTAVILDIFAQ+AT++EGK QVELAQL+Y LPRLRG+ D  SQQ GGIGTRGPGETQ+EVDRRR+ RR+ KLE+DL  +   R NQRK+RRRS F +V+IVGYTNAGKSTLLN +TGAEV +EDRLFATLD TTR+ QLPGGET+L+TDTVGF++KLP  LVEAFKSTLE  AE DLL+HVVD +GPDP+G M+AVR+VL EIGA +VPELL FNK+D  +      L+  H GS+A SA
Sbjct:   88 GKGKATEIQETSDDADADTVVFDDELSPAQQFNLEKILKRTALDRTAVILDIFAQNATTLEGKAQVELAQLKYRLPRLRGRGDQLSQQGGGIGTRGPGETQLEVDRRRIQRRLAKLEKDLTGLRRTRKNQRKSRRRSRFHTVAIVGYTNAGKSTLLNRLTGAEVLVEDRLFATLDATTRRLQLPGGETVLVTDTVGFIQKLPTGLVEAFKSTLEEVAEADLLLHVVDGAGPDPEGQMNAVRSVLREIGAGDVPELLAFNKSDQAEKEGFHHLLYRHEGSLAFSA 371          
BLAST of mRNA_M-pyrifera_M_contig85985.20039.1 vs. uniprot
Match: A0A7C7SAM5_9ACTN (GTPase HflX n=4 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7C7SAM5_9ACTN)

HSP 1 Score: 377 bits (968), Expect = 2.300e-126
Identity = 204/283 (72.08%), Postives = 234/283 (82.69%), Query Frame = 1
Query:    1 GKGKVDEILESALMFDADTVVFDDELTPAQQFNLERILKRTALDRTAVILDIFAQHATSMEGKTQVELAQLRYNLPRLRGK-KDFSQQAGGIGTRGPGETQIEVDRRRLVRRMHKLERDLRDITDRRANQRKARRRSPFRSVSIVGYTNAGKSTLLNAITGAEVKIEDRLFATLDPTTRQTQLPGGETILMTDTVGFVKKLPHQLVEAFKSTLEVAAEVDLLVHVVDASGPDPDGHMHAVRTVLSEIGAVEVPELLIFNKADLDPIAAERLVRHHPGSVAVSA 846
            GKGKV EI   +   DADTVVFD++LTPAQQ NLE ILKR+ALDRTAVILDIFAQ+A+S EG+ QVELAQLRY LPRLR   + FSQQAGGIGTRGPGETQ+EVDRRRL+RR+ +LE DLR I   RA Q KAR+R+  R+V+IVGYTNAGKSTLLN +T A V +EDRLFATLD TTR+ QLPGGE + ++DTVGF++KLPHQLVEAFKSTL+VA + DLLVHVVDAS PDP+G + AVRTVL EIGA  VPEL +FNKADL P AA RLV   PGSVA+SA
Sbjct:  110 GKGKVMEIKTVSEALDADTVVFDNDLTPAQQGNLEEILKRSALDRTAVILDIFAQNASSPEGRAQVELAQLRYRLPRLRRSGRTFSQQAGGIGTRGPGETQLEVDRRRLMRRITRLESDLRRIRGNRATQSKARKRTSNRAVAIVGYTNAGKSTLLNHLTDAGVLVEDRLFATLDATTRRLQLPGGEAVFLSDTVGFIRKLPHQLVEAFKSTLDVAVDADLLVHVVDASDPDPEGCIAAVRTVLDEIGADRVPELFVFNKADLAPAAAARLVDREPGSVAISA 392          
BLAST of mRNA_M-pyrifera_M_contig85985.20039.1 vs. uniprot
Match: A0A359F1P5_9ACTN (GTPase HflX n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A359F1P5_9ACTN)

HSP 1 Score: 376 bits (966), Expect = 2.610e-126
Identity = 205/283 (72.44%), Postives = 228/283 (80.57%), Query Frame = 1
Query:    1 GKGKVDEILESALMFDADTVVFDDELTPAQQFNLERILKRTALDRTAVILDIFAQHATSMEGKTQVELAQLRYNLPRLRGK-KDFSQQAGGIGTRGPGETQIEVDRRRLVRRMHKLERDLRDITDRRANQRKARRRSPFRSVSIVGYTNAGKSTLLNAITGAEVKIEDRLFATLDPTTRQTQLPGGETILMTDTVGFVKKLPHQLVEAFKSTLEVAAEVDLLVHVVDASGPDPDGHMHAVRTVLSEIGAVEVPELLIFNKADLDPIAAERLVRHHPGSVAVSA 846
            GKGKV+EI E A+  D DTVVFDDEL+PAQQFNLERIL RTALDRTAVILDIFAQ+A+S+EGK QVELAQL+Y LPRLRGK K  SQQ GGIGTRGPGETQ+EVDRRRLVRR+HKLE  LRDI   R  QRKAR R   R V IVGYTNAGKSTLLN +T A V +EDRLFATLDPTTR+ +LPGGE +L+TDTVGFV+KLPHQLVEAFKSTLEVA + DLLVHVVD S  DP+  + AV  VLSEIGA +VPELL+FNK+D     A        GSVA+SA
Sbjct:   96 GKGKVEEIKELAIALDCDTVVFDDELSPAQQFNLERILGRTALDRTAVILDIFAQNASSLEGKAQVELAQLKYRLPRLRGKGKSLSQQGGGIGTRGPGETQLEVDRRRLVRRIHKLEEQLRDIGTIRQTQRKARHRGNLRGVVIVGYTNAGKSTLLNRLTDAGVLVEDRLFATLDPTTRRMELPGGEAVLLTDTVGFVRKLPHQLVEAFKSTLEVANDADLLVHVVDGSAVDPEAEIEAVHDVLSEIGARDVPELLVFNKSDSSE-GARFYADKFEGSVAISA 377          
BLAST of mRNA_M-pyrifera_M_contig85985.20039.1 vs. uniprot
Match: A0A5Q2RH14_9ACTN (GTPase HflX n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RH14_9ACTN)

HSP 1 Score: 375 bits (964), Expect = 3.450e-126
Identity = 208/286 (72.73%), Postives = 236/286 (82.52%), Query Frame = 1
Query:    1 GKGKVDEILESALMFDADTVVFDDELTPAQQFNLERILKRTALDRTAVILDIFAQHATSMEGKTQVELAQLRYNLPRLRGK-KDFSQQAGGIGTR-GPGETQIEVDRRRLVRRMHKLERDLRDITDRRANQRKARRRSPFRSVSIVGYTNAGKSTLLNAITGAEVKIEDRLFATLDPTTRQTQLPGGETILMTDTVGFVKKLPHQLVEAFKSTLEVAAEVDLLVHVVDASGPDPDGHMHAVRTVLSEIGAVEVPELLIFNKADLDPIAAERLVRHHPGSVAVSAAS 852
            GKGKV+EI   A   DADTVVFDDELTPAQQ NLER+L R+A+DRTAVILDIFAQ+A ++EGK QV+LA LRY LPRLRGK K  SQQ+GGIG R GPGETQ+EVDRRR+ R +HKLE DLR+I   R  QRK+RRRSP++ V+IVGYTNAGKSTLLN +T A V +EDRLFATLD TTR+ QLPGGET+L+TDTVGFV KLPHQLVEAFKSTLEV AE DLLVH+VDASGP+   HM AVR+VL EIGA +VPELL FNKADL   A + L   HPGSVA+SAAS
Sbjct:   92 GKGKVEEIRVLAEAADADTVVFDDELTPAQQGNLERLLGRSAIDRTAVILDIFAQNAHTVEGKAQVQLALLRYRLPRLRGKGKSLSQQSGGIGARRGPGETQLEVDRRRVARLIHKLEADLREIGHHRDVQRKSRRRSPYQQVAIVGYTNAGKSTLLNRLTDAGVLVEDRLFATLDATTRRLQLPGGETVLVTDTVGFVTKLPHQLVEAFKSTLEVVAEADLLVHLVDASGPEVAAHMDAVRSVLGEIGAGDVPELLAFNKADLTDEAGQ-LAASHPGSVALSAAS 376          
BLAST of mRNA_M-pyrifera_M_contig85985.20039.1 vs. uniprot
Match: A0A2D9PTU5_9ACTN (GTPase HflX n=2 Tax=root TaxID=1 RepID=A0A2D9PTU5_9ACTN)

HSP 1 Score: 376 bits (966), Expect = 3.480e-126
Identity = 204/283 (72.08%), Postives = 234/283 (82.69%), Query Frame = 1
Query:    1 GKGKVDEILESALMFDADTVVFDDELTPAQQFNLERILKRTALDRTAVILDIFAQHATSMEGKTQVELAQLRYNLPRLRGK-KDFSQQAGGIGTRGPGETQIEVDRRRLVRRMHKLERDLRDITDRRANQRKARRRSPFRSVSIVGYTNAGKSTLLNAITGAEVKIEDRLFATLDPTTRQTQLPGGETILMTDTVGFVKKLPHQLVEAFKSTLEVAAEVDLLVHVVDASGPDPDGHMHAVRTVLSEIGAVEVPELLIFNKADLDPIAAERLVRHHPGSVAVSA 846
            G+GKV EI   +   DADTVVFD++LTPAQQ NLE IL RTALDRTAVILDIFAQ+A+S EGK QVELAQLRY LPRLR   + FSQQAGGIGTRGPGETQ+EVDRRRL+RR+ +LE DLR I   R+ Q KAR+++  R+V+IVGYTNAGKSTLLN +T AEV +EDRLFATLD TTR+ QLPGGET+ ++DTVGFV+KLPHQLVEAFKSTL+V  + DLLVHVVDAS PDP+G + AVR VL+EIGA  VPEL  FNKADL P AA+RLV   PGSVAVSA
Sbjct:   94 GRGKVHEIRTVSETLDADTVVFDNDLTPAQQGNLEEILNRTALDRTAVILDIFAQNASSPEGKAQVELAQLRYRLPRLRRSGRTFSQQAGGIGTRGPGETQLEVDRRRLMRRVTRLESDLRRIRKNRSTQSKARKQTSNRAVAIVGYTNAGKSTLLNHLTDAEVLVEDRLFATLDATTRRLQLPGGETVFLSDTVGFVRKLPHQLVEAFKSTLDVVVDADLLVHVVDASDPDPEGCIAAVRAVLAEIGADRVPELFAFNKADLAPAAAKRLVDREPGSVAVSA 376          
BLAST of mRNA_M-pyrifera_M_contig85985.20039.1 vs. uniprot
Match: UPI001E311E76 (GTPase HflX n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E311E76)

HSP 1 Score: 375 bits (964), Expect = 3.920e-126
Identity = 200/284 (70.42%), Postives = 231/284 (81.34%), Query Frame = 1
Query:    1 GKGKVDEILESALMFDADTVVFDDELTPAQQFNLERILKRTALDRTAVILDIFAQHATSMEGKTQVELAQLRYNLPRLRGK-KDFSQQAGGIGTR-GPGETQIEVDRRRLVRRMHKLERDLRDITDRRANQRKARRRSPFRSVSIVGYTNAGKSTLLNAITGAEVKIEDRLFATLDPTTRQTQLPGGETILMTDTVGFVKKLPHQLVEAFKSTLEVAAEVDLLVHVVDASGPDPDGHMHAVRTVLSEIGAVEVPELLIFNKADLDPIAAERLVRHHPGSVAVSA 846
            G GKV+E+       DADTVVFDDEL+PAQQ NLE+ L RTA+DRTAVILDIF Q+A S EGK QVELAQ+RY LPRLRG+    SQQ GGIG R G GETQ+EVDRRRL+RRMHKLE +LRD++  RA Q K+R+RS   +V+IVGYTNAGKSTLLN +T A V +EDRLFATLD TTR+ QLPGGE +L+TDTVGF+ KLPHQLVEAFKSTLEV  + DLLVHVVD SGPDP+ H+ AV TVL EIGA EVP+L++ NKADLDP+AA RL R HPGSVA+SA
Sbjct:   95 GAGKVEELRALCEQLDADTVVFDDELSPAQQRNLEKALGRTAIDRTAVILDIFGQNAHSQEGKAQVELAQIRYRLPRLRGRGTQMSQQRGGIGARQGGGETQLEVDRRRLLRRMHKLEAELRDVSRVRATQAKSRQRSRLSTVAIVGYTNAGKSTLLNRLTDAGVLVEDRLFATLDATTRRLQLPGGEAVLVTDTVGFITKLPHQLVEAFKSTLEVVVDADLLVHVVDGSGPDPETHIDAVNTVLDEIGAGEVPQLVVANKADLDPVAARRLARAHPGSVAISA 378          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85985.20039.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2DQG5_9ACTN1.730e-14278.01GTPase HflX n=1 Tax=Acidimicrobiales bacterium Tax... [more]
A0A7Y2IHT3_9ACTN8.920e-14278.01GTPase HflX n=1 Tax=Acidimicrobiales bacterium Tax... [more]
A0A2E0EH05_9ACTN4.840e-12771.33GTPase HflX n=8 Tax=Actinobacteria TaxID=201174 Re... [more]
A0A2A5YUJ9_9ACTN1.380e-12670.77GTPase HflX n=4 Tax=Acidimicrobiales TaxID=84993 R... [more]
A0A2E7T1W6_9ACTN2.020e-12671.13GTPase HflX n=3 Tax=Actinobacteria TaxID=201174 Re... [more]
A0A7C7SAM5_9ACTN2.300e-12672.08GTPase HflX n=4 Tax=Acidimicrobiia TaxID=84992 Rep... [more]
A0A359F1P5_9ACTN2.610e-12672.44GTPase HflX n=1 Tax=Acidimicrobiaceae bacterium Ta... [more]
A0A5Q2RH14_9ACTN3.450e-12672.73GTPase HflX n=1 Tax=Actinomarinicola tropica TaxID... [more]
A0A2D9PTU5_9ACTN3.480e-12672.08GTPase HflX n=2 Tax=root TaxID=1 RepID=A0A2D9PTU5_... [more]
UPI001E311E763.920e-12670.42GTPase HflX n=1 Tax=Rhabdothermincola sp. EGI L101... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85985contigM-pyrifera_M_contig85985:2..853 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score356.7
Seed ortholog evalue1e-95
Seed eggNOG ortholog1313172.YM304_27000
Preferred namehflX
KEGG koko:K03665
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464
EggNOG free text desc.GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
EggNOG OGs2GK55@201174,4CMWR@84992,COG2262@1,COG2262@2
COG Functional cat.S
Best tax levelAcidimicrobiia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Exons1
Model size852
Cds size852
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816770.1997972-CDS-M-pyrifera_M_contig85985:1..8531622816770.1997972-CDS-M-pyrifera_M_contig85985:1..853Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85985 2..853 +
1692278168.2172184-CDS-M-pyrifera_M_contig85985:1..8531692278168.2172184-CDS-M-pyrifera_M_contig85985:1..853Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85985 2..853 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85985.20039.1prot_M-pyrifera_M_contig85985.20039.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85985 2..853 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85985.20039.1

>prot_M-pyrifera_M_contig85985.20039.1 ID=prot_M-pyrifera_M_contig85985.20039.1|Name=mRNA_M-pyrifera_M_contig85985.20039.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=284bp
GKGKVDEILESALMFDADTVVFDDELTPAQQFNLERILKRTALDRTAVIL
DIFAQHATSMEGKTQVELAQLRYNLPRLRGKKDFSQQAGGIGTRGPGETQ
IEVDRRRLVRRMHKLERDLRDITDRRANQRKARRRSPFRSVSIVGYTNAG
KSTLLNAITGAEVKIEDRLFATLDPTTRQTQLPGGETILMTDTVGFVKKL
PHQLVEAFKSTLEVAAEVDLLVHVVDASGPDPDGHMHAVRTVLSEIGAVE
VPELLIFNKADLDPIAAERLVRHHPGSVAVSAAS
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mRNA from alignment at M-pyrifera_M_contig85985:2..853+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85985.20039.1 ID=mRNA_M-pyrifera_M_contig85985.20039.1|Name=mRNA_M-pyrifera_M_contig85985.20039.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=852bp|location=Sequence derived from alignment at M-pyrifera_M_contig85985:2..853+ (Macrocystis pyrifera P11B4 male)
GGCAAGGGCAAGGTCGACGAGATCCTCGAGTCGGCGTTGATGTTCGACGC CGACACCGTGGTGTTCGACGACGAACTGACGCCCGCCCAGCAGTTCAACC TCGAGCGAATTCTCAAACGTACGGCACTCGATCGCACAGCCGTCATCCTC GACATCTTCGCCCAGCATGCCACCTCGATGGAGGGCAAGACCCAGGTCGA GCTGGCCCAGCTCAGGTACAACCTGCCACGTCTGCGCGGCAAGAAGGACT TCAGTCAGCAGGCCGGTGGCATCGGAACCCGTGGTCCCGGTGAAACCCAG ATCGAGGTCGATCGTCGTCGGCTCGTGCGTCGGATGCACAAGCTCGAGCG CGACCTTCGAGACATCACCGATCGTCGAGCGAACCAGCGGAAGGCCCGGC GTCGGTCGCCGTTCCGCAGTGTGTCGATCGTCGGTTACACGAACGCCGGG AAGTCCACACTCCTGAACGCCATCACCGGTGCCGAGGTCAAGATCGAAGA TCGGCTCTTCGCCACGCTCGACCCCACCACACGGCAGACCCAGTTGCCCG GCGGCGAAACCATCCTCATGACCGACACCGTCGGGTTCGTGAAGAAGCTT CCGCACCAACTCGTCGAGGCGTTCAAGTCGACCCTCGAGGTCGCGGCCGA AGTCGATCTGCTGGTCCATGTCGTCGACGCGTCGGGTCCCGATCCCGACG GCCACATGCACGCCGTTCGGACGGTGCTCTCCGAGATCGGCGCCGTCGAA GTCCCCGAGCTGCTGATCTTCAACAAGGCCGATCTCGATCCGATCGCGGC GGAGCGCCTGGTGCGTCATCACCCCGGATCGGTCGCCGTCTCGGCTGCCA GC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85985:2..853+

>mRNA_M-pyrifera_M_contig85985.20039.1 ID=mRNA_M-pyrifera_M_contig85985.20039.1|Name=mRNA_M-pyrifera_M_contig85985.20039.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1704bp|location=Sequence derived from alignment at M-pyrifera_M_contig85985:2..853+ (Macrocystis pyrifera P11B4 male)
GGCAAGGGCAAGGTCGACGAGATCCTCGAGTCGGCGTTGATGTTCGACGC
CGACACCGTGGTGTTCGACGACGAACTGACGCCCGCCCAGCAGTTCAACC
TCGAGCGAATTCTCAAACGTACGGCACTCGATCGCACAGCCGTCATCCTC
GACATCTTCGCCCAGCATGCCACCTCGATGGAGGGCAAGACCCAGGTCGA
GCTGGCCCAGCTCAGGTACAACCTGCCACGTCTGCGCGGCAAGAAGGACT
TCAGTCAGCAGGCCGGTGGCATCGGAACCCGTGGTCCCGGTGAAACCCAG
ATCGAGGTCGATCGTCGTCGGCTCGTGCGTCGGATGCACAAGCTCGAGCG
CGACCTTCGAGACATCACCGATCGTCGAGCGAACCAGCGGAAGGCCCGGC
GTCGGTCGCCGTTCCGCAGTGTGTCGATCGTCGGTTACACGAACGCCGGG
AAGTCCACACTCCTGAACGCCATCACCGGTGCCGAGGTCAAGATCGAAGA
TCGGCTCTTCGCCACGCTCGACCCCACCACACGGCAGACCCAGTTGCCCG
GCGGCGAAACCATCCTCATGACCGACACCGTCGGGTTCGTGAAGAAGCTT
CCGCACCAACTCGTCGAGGCGTTCAAGTCGACCCTCGAGGTCGCGGCCGA
AGTCGATCTGCTGGTCCATGTCGTCGACGCGTCGGGTCCCGATCCCGACG
GCCACATGCACGCCGTTCGGACGGTGCTCTCCGAGATCGGCGCCGTCGAA
GTCCCCGAGCTGCTGATCTTCAACAAGGCCGATCTCGATCCGATCGCGGC
GGAGCGCCTGGTGCGTCATCACCCCGGATCGGTCGCCGTCTCGGCTGCCA
GCGGCAAGGGCAAGGTCGACGAGATCCTCGAGTCGGCGTTGATGTTCGAC
GCCGACACCGTGGTGTTCGACGACGAACTGACGCCCGCCCAGCAGTTCAA
CCTCGAGCGAATTCTCAAACGTACGGCACTCGATCGCACAGCCGTCATCC
TCGACATCTTCGCCCAGCATGCCACCTCGATGGAGGGCAAGACCCAGGTC
GAGCTGGCCCAGCTCAGGTACAACCTGCCACGTCTGCGCGGCAAGAAGGA
CTTCAGTCAGCAGGCCGGTGGCATCGGAACCCGTGGTCCCGGTGAAACCC
AGATCGAGGTCGATCGTCGTCGGCTCGTGCGTCGGATGCACAAGCTCGAG
CGCGACCTTCGAGACATCACCGATCGTCGAGCGAACCAGCGGAAGGCCCG
GCGTCGGTCGCCGTTCCGCAGTGTGTCGATCGTCGGTTACACGAACGCCG
GGAAGTCCACACTCCTGAACGCCATCACCGGTGCCGAGGTCAAGATCGAA
GATCGGCTCTTCGCCACGCTCGACCCCACCACACGGCAGACCCAGTTGCC
CGGCGGCGAAACCATCCTCATGACCGACACCGTCGGGTTCGTGAAGAAGC
TTCCGCACCAACTCGTCGAGGCGTTCAAGTCGACCCTCGAGGTCGCGGCC
GAAGTCGATCTGCTGGTCCATGTCGTCGACGCGTCGGGTCCCGATCCCGA
CGGCCACATGCACGCCGTTCGGACGGTGCTCTCCGAGATCGGCGCCGTCG
AAGTCCCCGAGCTGCTGATCTTCAACAAGGCCGATCTCGATCCGATCGCG
GCGGAGCGCCTGGTGCGTCATCACCCCGGATCGGTCGCCGTCTCGGCTGC
CAGC
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