mRNA_M-pyrifera_M_contig85982.20038.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A7Y2IHY5_9ACTN (NADH-quinone oxidoreductase subunit L n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IHY5_9ACTN) HSP 1 Score: 382 bits (980), Expect = 3.930e-124 Identity = 197/286 (68.88%), Postives = 227/286 (79.37%), Query Frame = 1 Query: 1 DEDASAPGSLAFADADHGDDAEHEVHAKPLPVVCSYTWFQSG------GAPGD----GGATIPW--GTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGITCLG 822 DE A S A A+ G++ H KP VV WF++G GA GD GG T+ + GT+ DGQS++ML VVTFIS LVH+FST+YV GDRRY HY+AFLSLFTASMLF V+SA+T+Q+IVGWELVGVCSFALIGHWWED DNS+AALKAFLTNRVGDIGLL+GMI+LFF AG TFDI+ +NHAAV G + T+ VASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYM+GRLYPVFW+GL I GSS N+LA +G +T +G Sbjct: 153 DEYALTDASEIAATAEEGEEGGGGEHIKPAAVVNCLDWFETGSFGSDIGASGDEAAQGGRTLKFSIGTIADGQSIMMLFVVTFISLLVHVFSTEYVKGDRRYVHYYAFLSLFTASMLFMVLSATTLQLIVGWELVGVCSFALIGHWWEDQDNSNAALKAFLTNRVGDIGLLIGMIVLFFGAGQTFDIMTINHAAVTGGLSQTTMTVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMVGRLYPVFWNGLMIPGSSFNILAFVGALTVVG 438
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A847EPL9_9ACTN (NADH-quinone oxidoreductase subunit L n=1 Tax=Propioniciclava sp. TaxID=2038686 RepID=A0A847EPL9_9ACTN) HSP 1 Score: 364 bits (935), Expect = 1.430e-118 Identity = 185/247 (74.90%), Postives = 208/247 (84.21%), Query Frame = 1 Query: 79 AKPLPVVCSYTWFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGITCL 819 A PVV TWF SG G TI GT+VDGQSV+MLVVVT IS LVHIFSTDYV GDRRYTHYFAFLSLFTASMLF+V++ +T+QMIVGWELVGVCSFALIGHWWE+ NSDAALKAFLTNRVGD+GLL+GMIIL+FAA +F +L++N A +G IG G LL ASLCL+ AVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYM+ RLYPVF++GL ISGSS+N LA +G +T L Sbjct: 100 AATRPVVNCATWFDSG----QGSVTI--GTMVDGQSVMMLVVVTLISLLVHIFSTDYVHGDRRYTHYFAFLSLFTASMLFFVLAENTLQMIVGWELVGVCSFALIGHWWEEKPNSDAALKAFLTNRVGDVGLLIGMIILYFAADRSFSVLDINVLAASGEIGRGLLLAASLCLIAAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMVARLYPVFFEGLSISGSSINALALVGAVTAL 340
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A6I3GIP1_9ACTN (NADH-quinone oxidoreductase subunit L n=11 Tax=root TaxID=1 RepID=A0A6I3GIP1_9ACTN) HSP 1 Score: 364 bits (934), Expect = 8.370e-118 Identity = 188/270 (69.63%), Postives = 218/270 (80.74%), Query Frame = 1 Query: 10 ASAPGSLAFADADHGDDAEHEVHAKPLPVVCSYTWFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGITCL 819 ++AP + A ++ + HE A PVV WF++G TI GTLVDGQSVL+L+VVT IS LVH+FSTDYV GDRRYTHYFAFLSLFTASMLF+V+S +T+QMIVGWELVGVCSFALIGHWWE+ NSDAALKAFLTNRVGDIGLLVG+I+L+FAAG +F IL+LN A G I H LL+ SLCL+TAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAG+YM+ RLYPVF++GL ISGSS+N L+ +G IT L Sbjct: 131 SAAPAAPAASEPAAEEKGGHEEVAT-RPVVSCVNWFENGDQ------TISIGTLVDGQSVLLLIVVTLISLLVHVFSTDYVHGDRRYTHYFAFLSLFTASMLFFVLSENTLQMIVGWELVGVCSFALIGHWWEEKPNSDAALKAFLTNRVGDIGLLVGVIVLYFAAGKSFSILDLNILANEGGISHNLLLIGSLCLITAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGVYMVARLYPVFFEGLSISGSSVNALSMIGAITAL 393
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A6J7RG52_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J7RG52_9ZZZZ) HSP 1 Score: 358 bits (920), Expect = 1.660e-117 Identity = 180/242 (74.38%), Postives = 205/242 (84.71%), Query Frame = 1 Query: 94 VVCSYTWFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGITCL 819 +V WF++G TI GTLVDGQSVL+L+VVT IS LVH+FSTDYV GDRRYTHYFAFLSLFTASMLF+V+S +T+QMIVGWELVGVCSFALIGHWWE+ NSDAALKAFLTNRVGDIGLLVG+I+L+FAAG +F IL+LN A G I H LL+ SLCL+TAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAG+YM+ RLYPVF++GL ISGSS+N L+ +G IT L Sbjct: 1 MVSCVNWFENGDQ------TISIGTLVDGQSVLLLIVVTLISLLVHVFSTDYVHGDRRYTHYFAFLSLFTASMLFFVLSENTLQMIVGWELVGVCSFALIGHWWEEKPNSDAALKAFLTNRVGDIGLLVGVIVLYFAAGKSFSILDLNILANEGGISHNLLLIGSLCLITAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGVYMVARLYPVFFEGLSISGSSVNALSMIGAITAL 236
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A7X7D6A0_9ACTN (NADH-quinone oxidoreductase subunit L n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7D6A0_9ACTN) HSP 1 Score: 362 bits (929), Expect = 2.700e-117 Identity = 190/270 (70.37%), Postives = 215/270 (79.63%), Query Frame = 1 Query: 10 ASAPGSLAFADADHGDDAEHEVHAKPLPVVCSYTWFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGITCL 819 A+APGS + A AE E H + PVV TWF +G + GT++DG S LMLVVVT IS LVH+FSTDYV+GDRRYTHYFAFLSLFTASMLFYVVS+ST+QMIVGWELVG+CSFALIGHWWE+ NSDAALKAFL NRVGDIGLL GMI+LFFAAG TFDI+++N A AG I H LLV SL L+TAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMI RLY VF++GL I S++NV+A +G +T L Sbjct: 110 AAAPGSASAPAA-----AEGEEHHETPPVVRDITWFDNGTMQ------VKVGTMIDGLSTLMLVVVTLISLLVHVFSTDYVAGDRRYTHYFAFLSLFTASMLFYVVSSSTLQMIVGWELVGLCSFALIGHWWEEKPNSDAALKAFLVNRVGDIGLLCGMIVLFFAAGRTFDIIQINELANAGEIRHFLLLVGSLSLMTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIARLYGVFFNGLSIGTSNINVMAVVGAVTLL 368
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: UPI001D127F6A (NADH-quinone oxidoreductase subunit L n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D127F6A) HSP 1 Score: 362 bits (929), Expect = 3.640e-117 Identity = 183/250 (73.20%), Postives = 206/250 (82.40%), Query Frame = 1 Query: 70 EVHAKPLPVVCSYTWFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGITCL 819 E A PVV TW S + +I WGT +DG SV+MLVVVT IS LVH+FSTDYV GDRRYTHYFAFLSLFTASMLF+V+S ST+QMIVGWELVGVCSFALIGHWWE+ NSDAALKAFLTNRVGDIGLL+GMIILFFAA +F I+++ AA G IGH TLL+ASLCL+ AVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGI+M+ RLYPVF++GL I GSS+N LA +G +T L Sbjct: 143 ESEAITRPVVRCATWIDSANS------SITWGTQIDGLSVMMLVVVTLISLLVHVFSTDYVHGDRRYTHYFAFLSLFTASMLFFVLSQSTLQMIVGWELVGVCSFALIGHWWEEKPNSDAALKAFLTNRVGDIGLLIGMIILFFAADRSFSIMDITIAANEGGIGHTTLLIASLCLIAAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIFMVARLYPVFFEGLAIGGSSINALAVVGAVTAL 386
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A3M2GAN3_ACTSX (NADH-quinone oxidoreductase subunit L (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GAN3_ACTSX) HSP 1 Score: 348 bits (893), Expect = 9.620e-117 Identity = 174/251 (69.32%), Postives = 204/251 (81.27%), Query Frame = 1 Query: 67 HEVHAKPLPVVCSYTWFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGITCL 819 HE + V S W +SGG D G LVDG SV+ML VVT +S LVH++STDYV+GDRRYTH+FAFLSLFTASMLF+V+S +T+QMIVGWELVG+CSFALIGHWWED NSDAALKAFLTNRVGD+GLLVGMI L+FAAG TFD + +N A VAG + H L+VA+ L AVMSKSGQF+LHTWLPDAMAGPTPVSALIHAATMVVAGIYM+GRLYPVF++G++I GSS+N+LA +G +T L Sbjct: 1 HEAEPS-VAVHTSTKWLRSGGVDFDAGI------LVDGMSVMMLFVVTLVSLLVHVYSTDYVAGDRRYTHFFAFLSLFTASMLFFVLSDNTLQMIVGWELVGLCSFALIGHWWEDKANSDAALKAFLTNRVGDVGLLVGMITLYFAAGGTFDTVTINQAVVAGEVSHTALVVAATALTAAVMSKSGQFVLHTWLPDAMAGPTPVSALIHAATMVVAGIYMVGRLYPVFFEGMQIQGSSINLLAVVGAVTLL 244
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A7Y2GKW3_9ACTN (NADH-quinone oxidoreductase subunit L n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GKW3_9ACTN) HSP 1 Score: 357 bits (917), Expect = 4.550e-115 Identity = 186/262 (70.99%), Postives = 211/262 (80.53%), Query Frame = 1 Query: 31 AFADADHGDDA-EHEVHAKPLPVVCSYTWFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGIT 813 + AD + G +A E E + + S+TWFQSGG G LVDG S++ML VVTFIS LVHI+STDYV+GDRRYTH+FAFLSLF+ASML V+S+ST+Q I WELVGVCSFALIGHWWE+ NSDAALKAFLTNRVGDIGLLVGMIILFFAAG+TFDIL +N AVAG I H LL ASLCL AVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAG++MI +LYPVF+DG I+GSS+NVLA +G IT Sbjct: 142 SLADPEEGAEAGEKEEEHPAVAIHRSFTWFQSGGHE------FSVGMLVDGLSIMMLFVVTFISLLVHIYSTDYVNGDRRYTHFFAFLSLFSASMLLLVMSSSTVQFITAWELVGVCSFALIGHWWEEKPNSDAALKAFLTNRVGDIGLLVGMIILFFAAGSTFDILTINEKAVAGEISHNLLLWASLCLTAAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGVFMIAQLYPVFFDGYSIAGSSINVLAVIGSIT 397
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A7K2E9D8_9ACTN (NADH-quinone oxidoreductase subunit L (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E9D8_9ACTN) HSP 1 Score: 344 bits (883), Expect = 5.830e-113 Identity = 177/257 (68.87%), Postives = 202/257 (78.60%), Query Frame = 1 Query: 49 HGDDAEHEVHAKPLPVVCSYTWFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGITCL 819 H DDA V A V + W SGG D G LVDG SV+ML VVT +S LVH++STDYV+GD RYTH+FAFLSLFTA+MLF+V+S + +QMIVGWELVGVCSF LIGHWWE +NSDAALKAF TNRVGD+GLLVG+ ILFFAAG TFD L L+ AG + H L+VASLCLL AVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYM+ RLYPVFW+G+ I+GSS+NVLA +G +T L Sbjct: 84 HRDDAHEGVQA----VHRTVGWLHSGGVEYDAGI------LVDGLSVMMLFVVTAVSLLVHVYSTDYVAGDARYTHFFAFLSLFTAAMLFFVLSDNLLQMIVGWELVGVCSFVLIGHWWEHKENSDAALKAFFTNRVGDVGLLVGVSILFFAAGRTFDTLTLSERINAGEVSHTALVVASLCLLAAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMVARLYPVFWEGMSIAGSSINVLALVGAVTLL 330
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A7X6APG0_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6APG0_9ACTN) HSP 1 Score: 337 bits (864), Expect = 4.460e-112 Identity = 171/260 (65.77%), Postives = 210/260 (80.77%), Query Frame = 1 Query: 43 ADHGDDAEHEVHAKPLPVVCSYT-WFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGN--TFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGIT 813 A+ GD+ + + P V + T W Q+GG + GA G LVDG SV+M+ VVT +S LVH++STDYV GDRRYTH+FAFLSLFTASMLF+V+S + +QMIVGWELVGVCSF LIGHWWE+ NSDAALKAFLTNRVGD+GLL+G+ LFFAAG TFD +++N A V GT+GH L+VA+ CL+ AVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGI+++ RLYPVF++G++I GSS+N+LA +G +T Sbjct: 79 AEEGDEKKEDGAVHPYVGVQNNTQWLQTGGV--EFGA----GILVDGLSVMMIFVVTVVSLLVHVYSTDYVDGDRRYTHFFAFLSLFTASMLFFVLSDNLLQMIVGWELVGVCSFVLIGHWWEEKPNSDAALKAFLTNRVGDVGLLIGVSTLFFAAGGGKTFDTVKINEAIVQGTVGHTALVVAAACLMAAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIFLVARLYPVFFEGMQIGGSSINLLATVGAVT 332 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85982.20038.1 >prot_M-pyrifera_M_contig85982.20038.1 ID=prot_M-pyrifera_M_contig85982.20038.1|Name=mRNA_M-pyrifera_M_contig85982.20038.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=274bp DEDASAPGSLAFADADHGDDAEHEVHAKPLPVVCSYTWFQSGGAPGDGGAback to top mRNA from alignment at M-pyrifera_M_contig85982:3..824- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85982.20038.1 ID=mRNA_M-pyrifera_M_contig85982.20038.1|Name=mRNA_M-pyrifera_M_contig85982.20038.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig85982:3..824- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85982:3..824- >mRNA_M-pyrifera_M_contig85982.20038.1 ID=mRNA_M-pyrifera_M_contig85982.20038.1|Name=mRNA_M-pyrifera_M_contig85982.20038.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1644bp|location=Sequence derived from alignment at M-pyrifera_M_contig85982:3..824- (Macrocystis pyrifera P11B4 male)back to top |