prot_M-pyrifera_M_contig8598.20037.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8598.20037.1
Unique Nameprot_M-pyrifera_M_contig8598.20037.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length165
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig8598.20037.1 vs. uniprot
Match: A0A6H5K1L1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1L1_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 5.520e-22
Identity = 60/131 (45.80%), Postives = 79/131 (60.31%), Query Frame = 0 
Query:   32 QQQDQQLLQREARLAYAISSPLGSSNAMVVQKQTL-----EVKDGGAIWYSEADCITGFPMVPGELNVKATYTVSPAE-GEDPGSVRVCVGVAVEDIGLPKFFSSVEPKVKNSVIKDVKKQAGRWLQEMTE 156
            Q + Q LLQR A L YAI+SP  SS+A VVQ+ TL     +   GG I Y+E DCITGFPMVPG+L+VK T+ V+  + G     V V V V V++  LPK    +  +V + V    +KQA +WL EM +
Sbjct:   57 QPRPQLLLQRRATLNYAITSPFDSSDAKVVQEHTLLDDRHQEGGGGGICYTERDCITGFPMVPGDLSVKPTFLVTRVDDGGHTERVHVRVEVVVKETELPKRLRFLSKRVSDIVGDGGRKQAEKWLGEMVK 187
[Close]
BLAST of mRNA_M-pyrifera_M_contig8598.20037.1 vs. uniprot
Match: D8LD38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD38_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 9.540e-18
Identity = 45/87 (51.72%), Postives = 57/87 (65.52%), Query Frame = 0 
Query:   71 GGAIWYSEADCITGFPMVPGELNVKATYTVSPAE-GEDPGSVRVCVGVAVEDIGLPKFFSSVEPKVKNSVIKDVKKQAGRWLQEMTE 156
            GG I Y+E+DCITGFPMVPG+L+VK T+ V+P E G     VRV VGV VE+I LPK    +  +V   V    +KQA +WL EM +
Sbjct:  110 GGGICYTESDCITGFPMVPGDLSVKTTFLVTPVEDGGHEERVRVRVGVVVEEIELPKRLRFLSKRVSKIVGNGGRKQAEKWLGEMVK 196
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8598.20037.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K1L1_9PHAE5.520e-2245.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD38_ECTSI9.540e-1851.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8598contigM-pyrifera_M_contig8598:7486..7980 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8598.20037.1mRNA_M-pyrifera_M_contig8598.20037.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8598 4426..8114 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8598.20037.1 ID=prot_M-pyrifera_M_contig8598.20037.1|Name=mRNA_M-pyrifera_M_contig8598.20037.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp
MEEEWPSGSGGGVTLPSPPRPTPETRLCYQHQQQDQQLLQREARLAYAIS
SPLGSSNAMVVQKQTLEVKDGGAIWYSEADCITGFPMVPGELNVKATYTV
SPAEGEDPGSVRVCVGVAVEDIGLPKFFSSVEPKVKNSVIKDVKKQAGRW
LQEMTEACMRGPSK*
back to top