prot_M-pyrifera_M_contig8594.20034.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8594.20034.1
Unique Nameprot_M-pyrifera_M_contig8594.20034.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length137
Homology
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BLAST of mRNA_M-pyrifera_M_contig8594.20034.1 vs. uniprot
Match: A0A6H5KXF7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXF7_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 8.870e-19
Identity = 54/127 (42.52%), Postives = 78/127 (61.42%), Query Frame = 0 
Query:    4 QLVSVVMTEGQDPDVFINEIYYIRDELVEMGEVIHDDILLDIVLEGLTDG-YLQIKYNAEADNNFTLENAIYTMRNMHANRMAKNGPARKQKGRKSAMVTTFTKKGKCHICKKAGHWAREC--RNRR 127
            +L ++ M    DPD F++++  +RDEL  +G  I DD  ++I+L+ L +  Y  IKY AE  ++ TLE A+YTMRN++ NR   +G +R  KGR SAMV + TK   C  C K GH  + C  RN+R
Sbjct:  254 KLYNMTMDVDMDPDAFMHDMTELRDELQLLGSPIPDDQFMNIILDCLPEELYSGIKYEAETKDDLTLEQALYTMRNLYINRKEASGSSRAAKGRSSAMVASTTKT--CSFCHKKGHLTQHCWKRNKR 378
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8594.20034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXF7_9PHAE8.870e-1942.52Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 109..125
e-value: 8.9E-4
score: 28.6
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 108..124
e-value: 1.1E-4
score: 22.2
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 109..125
score: 8.829
NoneNo IPR availableGENE3D4.10.60.10coord: 104..133
e-value: 7.6E-7
score: 30.7
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 1..78
e-value: 2.0E-6
score: 27.5
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 105..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8594contigM-pyrifera_M_contig8594:4971..5381 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8594.20034.1mRNA_M-pyrifera_M_contig8594.20034.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8594 4971..5381 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8594.20034.1 ID=prot_M-pyrifera_M_contig8594.20034.1|Name=mRNA_M-pyrifera_M_contig8594.20034.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp
MKNQLVSVVMTEGQDPDVFINEIYYIRDELVEMGEVIHDDILLDIVLEGL
TDGYLQIKYNAEADNNFTLENAIYTMRNMHANRMAKNGPARKQKGRKSAM
VTTFTKKGKCHICKKAGHWARECRNRRSSMKDTNKNV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf