mRNA_M-pyrifera_M_contig85939.20033.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: A0A3Q3B1L8_KRYMA (CYCLIN domain-containing protein n=2 Tax=Rivulidae TaxID=28771 RepID=A0A3Q3B1L8_KRYMA) HSP 1 Score: 68.9 bits (167), Expect = 3.610e-12 Identity = 32/98 (32.65%), Postives = 65/98 (66.33%), Query Frame = 1 Query: 40 RWVVTREELEASPSRLDGVSLDMEVEYAHKSCLLLDHLAE-LTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEESVVRIEVVAKVS 330 +W+ TRE+L+A+PSR G+ D E+ Y ++ L+ + + L +++ + +TA+V +HRF+ S+++ +R++++ FLA K+EE ++E V K++ Sbjct: 10 KWLFTREQLDATPSRRCGIEADRELSYRQQAANLIQDIGQRLNVSQLIINTAIVYMHRFYMIHSFTKFHRNIISQTTLFLAAKVEEQPRKLEHVIKIA 107
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: UPI0018ACB76D (cyclin-T2 n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=UPI0018ACB76D) HSP 1 Score: 68.9 bits (167), Expect = 1.080e-11 Identity = 32/98 (32.65%), Postives = 65/98 (66.33%), Query Frame = 1 Query: 40 RWVVTREELEASPSRLDGVSLDMEVEYAHKSCLLLDHLAE-LTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEESVVRIEVVAKVS 330 +W+ TRE+L+A+PSR G+ D E+ Y ++ L+ + + L +++ + +TA+V +HRF+ S+++ +R++++ FLA K+EE ++E V K++ Sbjct: 10 KWLFTREQLDATPSRRCGIEADRELSYRQQAANLIQDIGQRLNVSQLIINTAIVYMHRFYMIHSFTKFHRNIISQTTLFLAAKVEEQPRKLEHVIKIA 107
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: A0A813ZH03_9BILA (Hypothetical protein n=2 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813ZH03_9BILA) HSP 1 Score: 69.7 bits (169), Expect = 1.290e-11 Identity = 34/90 (37.78%), Postives = 61/90 (67.78%), Query Frame = 1 Query: 34 EHRWVVTREELEASPSRLDGVSLDMEVEYAHKSCLLLDHLA-ELTLAKAVASTAMVLLHRFFSRQSYSRHYR--DLVASACFFLACKLEE 294 E RW+ T+E+++ SPSR++G+S + E++ ++ L + L EL + + +TA++ +HRFF S+ + +R +VA++C FLACK+EE Sbjct: 64 ETRWIFTKEKIDNSPSRMEGLSAEQELKERQEAALFISDLGIELKVNQLCINTAIIYMHRFFMIHSFKKFHRYVRMVATSCLFLACKVEE 153
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: UPI00090122CF (cyclin-T1-3-like isoform X4 n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI00090122CF) HSP 1 Score: 68.9 bits (167), Expect = 2.370e-11 Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 40 RWVVTREELEA-SPSRLDGVSLDMEVEYAHKSCLLLDHLA-ELTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEES 297 RW +REE+E SPSR DG+ + E C L L EL + +TAM+L H+F+ RQS+++++ ++A+AC FLACK+EE+ Sbjct: 32 RWYFSREEIENHSPSRKDGIDYEKESGLRKLYCSFLQELGIELKGPQVTIATAMLLCHQFYMRQSHTKNHWQIIATACMFLACKVEET 119
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: UPI0009012BAE (cyclin-T1-3-like isoform X1 n=6 Tax=Ipomoea TaxID=4119 RepID=UPI0009012BAE) HSP 1 Score: 68.9 bits (167), Expect = 2.440e-11 Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 40 RWVVTREELEA-SPSRLDGVSLDMEVEYAHKSCLLLDHLA-ELTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEES 297 RW +REE+E SPSR DG+ + E C L L EL + +TAM+L H+F+ RQS+++++ ++A+AC FLACK+EE+ Sbjct: 32 RWYFSREEIENHSPSRKDGIDYEKESGLRKLYCSFLQELGIELKGPQVTIATAMLLCHQFYMRQSHTKNHWQIIATACMFLACKVEET 119
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: M5XN82_PRUPE (Uncharacterized protein n=8 Tax=Prunus TaxID=3754 RepID=M5XN82_PRUPE) HSP 1 Score: 65.5 bits (158), Expect = 3.620e-10 Identity = 35/91 (38.46%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 31 SEHRWVVTREELE-ASPSRLDGVSLDMEVEYAHKSCLLLDHLA-ELTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEES 297 S +W TR+E+E SPSR DG+SL E + C L + +L +++ + AM+L HRF+ RQS++++ ++A+A FFLACK+ ++ Sbjct: 32 SMRKWYFTRQEIEDQSPSRRDGISLKKESQLRDSYCSFLQAIGMKLKVSQTTIACAMMLCHRFYMRQSHAKNGWQVIATASFFLACKVRDT 122
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: UPI000539BB1B (LOW QUALITY PROTEIN: cyclin-T1-2-like n=2 Tax=Camelina sativa TaxID=90675 RepID=UPI000539BB1B) HSP 1 Score: 65.5 bits (158), Expect = 3.850e-10 Identity = 38/92 (41.30%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 43 WVVTREELEA-SPSRLDGVSLDMEVEYAHKSCLLLDHLAE-LTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEESVVRIE 312 W TRE++E SPSR DG+ L+ME + C L++L E L L + +TA V HRFF RQS++++ R +A+ C LA K+ E+ V ++ Sbjct: 33 WXFTREDIETTSPSRRDGIDLNMENSLRNSYCSFLENLGERLKLPQVTIATATVFCHRFFIRQSHAKNDRWTIATVCMLLAGKVVETPVALK 124
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: A0A7J6EC76_CANSA (Uncharacterized protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6EC76_CANSA) HSP 1 Score: 64.7 bits (156), Expect = 7.070e-10 Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 1 Query: 40 RWVVTREELEA-SPSRLDGVSLDMEVEYAHKSCLLLDHLA-ELTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEES 297 RW +R E+E SPSR DGV L E C L L L + + +TA++ HRFF RQS++++ R +A+AC FLA K+EE+ Sbjct: 43 RWYFSRREIEENSPSRHDGVDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFHRQSHAKNDRRTIATACMFLAGKVEET 130
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: A0A803Q2T9_CANSA (Uncharacterized protein n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A803Q2T9_CANSA) HSP 1 Score: 64.7 bits (156), Expect = 7.370e-10 Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 1 Query: 40 RWVVTREELEA-SPSRLDGVSLDMEVEYAHKSCLLLDHLA-ELTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEES 297 RW +R E+E SPSR DGV L E C L L L + + +TA++ HRFF RQS++++ R +A+AC FLA K+EE+ Sbjct: 32 RWYFSRREIEENSPSRHDGVDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFHRQSHAKNDRRTIATACMFLAGKVEET 119
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: A9SUA9_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SUA9_PHYPA) HSP 1 Score: 63.2 bits (152), Expect = 9.850e-10 Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 1 Query: 40 RWVVTREELEA-SPSRLDGVSLDMEVEYAHKSCLLLDHLA-ELTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEES 297 RW EE+E SPSRLDGV L E + K + L L L + + +TA+V HRFF RQS++++ R ++A+AC FLA K+EE+ Sbjct: 3 RW----EEIEKFSPSRLDGVDLKKETYFRKKYYIFLQDLGMRLKVPQVTIATAIVFCHRFFHRQSHAKNDRLIIATACMFLAGKVEET 86 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85939.20033.1 >prot_M-pyrifera_M_contig85939.20033.1 ID=prot_M-pyrifera_M_contig85939.20033.1|Name=mRNA_M-pyrifera_M_contig85939.20033.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp MSVSEHRWVVTREELEASPSRLDGVSLDMEVEYAHKSCLLLDHLAELTLAback to top mRNA from alignment at M-pyrifera_M_contig85939:67..651- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85939.20033.1 ID=mRNA_M-pyrifera_M_contig85939.20033.1|Name=mRNA_M-pyrifera_M_contig85939.20033.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig85939:67..651- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85939:67..651- >mRNA_M-pyrifera_M_contig85939.20033.1 ID=mRNA_M-pyrifera_M_contig85939.20033.1|Name=mRNA_M-pyrifera_M_contig85939.20033.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig85939:67..651- (Macrocystis pyrifera P11B4 male)back to top |