prot_M-pyrifera_M_contig8575.19999.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8575.19999.1
Unique Nameprot_M-pyrifera_M_contig8575.19999.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length78
Homology
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: D8LS34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS34_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 2.440e-38
Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = 0
Query:    2 QAFFGLNPGVTVLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 75
            QA FG NPGVT+L+EFDH+DKRPTKP+ PGD+RASE LPIFEGSEAVSGTATVLVAP KKVDHLGIKAELIGQI
Sbjct:    2 QALFGFNPGVTILVEFDHIDKRPTKPSTPGDRRASEALPIFEGSEAVSGTATVLVAPGKKVDHLGIKAELIGQI 75          
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: A0A836CB39_9STRA (Vacuolar protein sorting-associated protein 26-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB39_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.150e-25
Identity = 48/73 (65.75%), Postives = 58/73 (79.45%), Query Frame = 0
Query:    3 AFFGLNPGVTVLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 75
            A+FGL PG TVL+EFD  ++RP++   PGDK+A E +PIF GSE VSG  TVLVAP KKVDH+GIK E+IGQI
Sbjct:    2 AWFGLQPGATVLLEFDGAERRPSRAPPPGDKKALERVPIFVGSEPVSGAVTVLVAPGKKVDHMGIKVEMIGQI 74          
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: A0A835YS62_9STRA (Vacuolar protein sorting-associated protein 26-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS62_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 8.450e-11
Identity = 45/136 (33.09%), Postives = 56/136 (41.18%), Query Frame = 0
Query:    2 QAFFGLNPGVTVLIEFDHV-------------------------------------------DKRPTKPAAPGDKRASETLPIFEGS-------------------EAVSGTATVLVAPAKKVDHLGIKAELIGQI 75
            +A+FGL P  T L+EFD                                             ++RP++   PGDK+A E +PIF GS                     VSG  TVLVAP KKVDH+GIK E+IGQI
Sbjct:  156 EAWFGLQPVATTLLEFDGAAVSAPHAASNHRYCHRRCGYKHAGVAXXXXXXXXXXXXXXXXXERRPSRAPPPGDKKALERVPIFVGSXXXXXXXXXXXRNEVNGAARPVSGAVTVLVAPGKKVDHMGIKVEMIGQI 291          
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: A0A7S2UYV3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYV3_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 4.090e-9
Identity = 29/73 (39.73%), Postives = 42/73 (57.53%), Query Frame = 0
Query:    3 AFFGLNPGVTVLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 75
            + FG  P   + ++F     R  K      ++ S+ L IF G EAVSGT  V++ P K+++H GIK E+IGQI
Sbjct:    2 SLFGFGPAAEIRLDFADSATRTRKAVGAVGQKDSKQLLIFHGEEAVSGTVDVVLPPGKRLEHQGIKVEMIGQI 74          
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: A0A7S1CEN8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEN8_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.000e-8
Identity = 27/73 (36.99%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    3 AFFGLNPGVTVLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 75
            + FG  P  T+ IE +  +KR  +     D      +P+F+ +E VSG  T++V  +KK++H+GIK EL+G I
Sbjct:    2 SIFGFGPSATIDIELNGAEKRAMRRQETLDGTEGVDVPVFQDTEDVSGKVTLVVPGSKKLEHIGIKVELLGHI 74          
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: A0A5J4XEX0_9CHLO (Subunit of retromer complex n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XEX0_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 5.740e-8
Identity = 31/79 (39.24%), Postives = 44/79 (55.70%), Query Frame = 0
Query:    1 QQAFFG---LNPGVTVLIEFDHVDKRPTKPAA-PGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 75
            Q+  FG   L    TV +EF   D++P K A+  G    +E LP++   ++V G   V   P KKV+H GIK +L+GQI
Sbjct:    4 QKGLFGGLTLGTNATVQLEFRRADRKPVKAASIKGKGSETEQLPLYTNKDSVVGEIRVANTPGKKVEHQGIKVQLLGQI 82          
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: A0A8J2AHK6_9DINO (Hypothetical protein n=2 Tax=unclassified Amoebophrya TaxID=2558461 RepID=A0A8J2AHK6_9DINO)

HSP 1 Score: 56.6 bits (135), Expect = 1.370e-7
Identity = 34/73 (46.58%), Postives = 40/73 (54.79%), Query Frame = 0
Query:    3 AFFGLNPGVTVLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 75
             FFG  P  TV I  D  + R T P   G  +  E   I+   E V+GTA V V P KKVDH GI+ ELIGQ+
Sbjct:    4 GFFGGTP-CTVDITLDAEENRKTAPL--GRDKKGERAYIYTDGEDVNGTAVVSVRPGKKVDHQGIRVELIGQV 73          
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: I0Z698_COCSC (Vacuolar protein sorting-associated protein 26 n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z698_COCSC)

HSP 1 Score: 56.6 bits (135), Expect = 1.480e-7
Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    6 GLNPGVTVLIEFDHVDKRPTKPA---APGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 75
            GL  G TV +EF + D  P K A   A G +  +ETLP+F   + ++G   V   P KK++H GIK +LIGQI
Sbjct:    9 GLGQGGTVQLEFKNDDGAPVKTATVKAGGGE--TETLPLFTNKDTITGEVKVANIPGKKLEHQGIKVQLIGQI 79          
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: A0A7S0L8Y1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L8Y1_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 1.680e-7
Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 0
Query:   13 VLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 75
            ++I+FD+ D      +   + + SE L +F+G + V GT  V + P KK+DH GIK ELIGQI
Sbjct:    1 IVIKFDNEDSMQMV-SMKNEHKDSEQLCLFQGKDTVGGTVEVNIKPGKKIDHTGIKIELIGQI 62          
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: A0A0G4EAR0_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EAR0_VITBC)

HSP 1 Score: 55.8 bits (133), Expect = 2.580e-7
Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = 0
Query:   10 GVTVLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 75
            G ++ ++FDH  +R   P   G  R  E   I+   E VSG+A V + P KK+DH G+K ELIGQ+
Sbjct:   11 GCSLEVQFDHEPQRKMAPL--GRDRKGEKALIYSDGEDVSGSAMVSMKPGKKIDHQGVKIELIGQV 74          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS34_ECTSI2.440e-3886.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CB39_9STRA2.150e-2565.75Vacuolar protein sorting-associated protein 26-dom... [more]
A0A835YS62_9STRA8.450e-1133.09Vacuolar protein sorting-associated protein 26-dom... [more]
A0A7S2UYV3_9STRA4.090e-939.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1CEN8_9STRA2.000e-836.99Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A5J4XEX0_9CHLO5.740e-839.24Subunit of retromer complex n=1 Tax=Trebouxia sp. ... [more]
A0A8J2AHK6_9DINO1.370e-746.58Hypothetical protein n=2 Tax=unclassified Amoeboph... [more]
I0Z698_COCSC1.480e-743.84Vacuolar protein sorting-associated protein 26 n=2... [more]
A0A7S0L8Y1_9EUKA1.680e-742.86Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A0G4EAR0_VITBC2.580e-742.42Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028934Vacuolar protein sorting protein 26 relatedPFAMPF03643Vps26coord: 10..75
e-value: 4.2E-9
score: 35.8
IPR014752Arrestin, C-terminalGENE3D2.60.40.640coord: 2..77
e-value: 9.9E-11
score: 43.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8575contigM-pyrifera_M_contig8575:8564..9544 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8575.19999.1mRNA_M-pyrifera_M_contig8575.19999.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8575 8564..9544 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8575.19999.1 ID=prot_M-pyrifera_M_contig8575.19999.1|Name=mRNA_M-pyrifera_M_contig8575.19999.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp
QQAFFGLNPGVTVLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSG
TATVLVAPAKKVDHLGIKAELIGQIGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028934Vps26-related
IPR014752Arrestin_C