prot_M-pyrifera_M_contig8575.19997.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8575.19997.1
Unique Nameprot_M-pyrifera_M_contig8575.19997.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length116
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig8575.19997.1 vs. uniprot
Match: D8LS33_ECTSI (Conserved Cys-containing small protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS33_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 4.430e-19
Identity = 39/59 (66.10%), Postives = 48/59 (81.36%), Query Frame = 0 
Query:    1 MLMGLPLSIHRKSYWPVTLAAVAGTAADFMDGNTNCRQQREALLACIARNESAEAAKGQ 59
            +L+GLPLS+H+KSYWPVTLAAVAGTAADF +G  +CR QREAL+A IAR  + +A   Q
Sbjct:   30 VLLGLPLSVHKKSYWPVTLAAVAGTAADFKEGTADCRPQREALMAFIARKNAGQAKAQQ 88
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8575.19997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LS33_ECTSI4.430e-1966.10Conserved Cys-containing small protein n=1 Tax=Ect... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8575contigM-pyrifera_M_contig8575:901..1933 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8575.19997.1mRNA_M-pyrifera_M_contig8575.19997.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8575 883..1933 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8575.19997.1 ID=prot_M-pyrifera_M_contig8575.19997.1|Name=mRNA_M-pyrifera_M_contig8575.19997.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp
MLMGLPLSIHRKSYWPVTLAAVAGTAADFMDGNTNCRQQREALLACIARN
ESAEAAKGQGARGAQPRLSEPRQEWPEPRDGGWPDQGWEEQAGDARDGGG
SEGEEQGQGEWKGKW*
back to top