mRNA_M-pyrifera_M_contig85746.19995.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85746.19995.1 vs. uniprot
Match: A0A6B2L527_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L527_9EUKA) HSP 1 Score: 70.5 bits (171), Expect = 9.330e-12 Identity = 46/122 (37.70%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 7 YATEVFSASELEALREMVEGFGTYNTALGDV----TAKESIGEGGKMGTAACDHPLLVPGGVNGSECKFPGRLDTALSYVRHGGHHGVKEPFEVMATRALTFLSYNRDGFLSDPKSPVQHLF 360 Y T+ + + L E ++GF + T D+ T E IGE C HPLLVP V+ + C FPGR+D A+ Y+ GGH G+KE FE +A+R +F Y D P +Q LF Sbjct: 27 YQTDFITEHTRQTLLETLKGFQSLPTNAMDLKYYKTRHEHIGEAVPF-DGQCPHPLLVPN-VDRTLCVFPGRVDVAMHYITTGGHEGLKESFEKLASRVQSFGVYIFD---LAPHPALQDLF 143
BLAST of mRNA_M-pyrifera_M_contig85746.19995.1 vs. uniprot
Match: E4X8I0_OIKDI (Uncharacterized protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4X8I0_OIKDI) HSP 1 Score: 64.3 bits (155), Expect = 9.460e-10 Identity = 44/124 (35.48%), Postives = 65/124 (52.42%), Query Frame = 1 Query: 1 YHYATEVFSASELEALREMVEGFGTYNTALGDVTAK--ESIGEGG-KMGTAACDHPLLVPGGVNGSECKFPGRLDTALSYVRHGGHHGVKEPFEVMATRALTFLSYNRDGFLSDPKSPVQHLFQ 363 Y + S S +E+LRE V + TA+ D A+ ESIGE K CD + G CKF GR D L +++ GGH G+KE E + + L+F++Y D ++DP+ ++ LFQ Sbjct: 46 YEIVEDFLSESNIESLREWVFNERRFATAV-DAAARGVESIGEDEPKNADGGCDE-MTFSAGPQSPTCKFSGRADIGLHFIKTGGHRGMKETPEKLISSILSFINYYPDK-VNDPE--IKKLFQ 164
BLAST of mRNA_M-pyrifera_M_contig85746.19995.1 vs. uniprot
Match: E4Y3X9_OIKDI (Uncharacterized protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4Y3X9_OIKDI) HSP 1 Score: 63.5 bits (153), Expect = 2.680e-9 Identity = 43/124 (34.68%), Postives = 65/124 (52.42%), Query Frame = 1 Query: 1 YHYATEVFSASELEALREMVEGFGTYNTALGDVTAK--ESIGEGGKMGT-AACDHPLLVPGGVNGSECKFPGRLDTALSYVRHGGHHGVKEPFEVMATRALTFLSYNRDGFLSDPKSPVQHLFQ 363 Y + S S +E+LRE V + TA+ D A+ ESIGE + CD + G CKF GR D L +++ GGH G+KE E + + L+F++Y D ++DP+ ++ LFQ Sbjct: 46 YEIVEDFLSESNIESLREWVFNERRFATAV-DAAARGVESIGEDEPINADGGCDE-MTFSAGPQSPTCKFSGRADIGLHFIKTGGHRGMKETPEKLISSILSFINYYPDK-VNDPE--IKKLFQ 164
BLAST of mRNA_M-pyrifera_M_contig85746.19995.1 vs. uniprot
Match: F2U4N7_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U4N7_SALR5) HSP 1 Score: 61.6 bits (148), Expect = 1.250e-8 Identity = 35/105 (33.33%), Postives = 54/105 (51.43%), Query Frame = 1 Query: 1 YHYATEVFSASELEALREMVEGFGTYNTALGDVT-AKESIGEGGKMGTA-ACDHPLLVPGGVNGSECKFPGRLDTALSYVRHGGHHGVKEPFEVMATRALTFLSY 309 Y E+++ E L +MV + + + + D T A ++IGE C HPL+VP NGS C RLD YV GG+ G+KE ++ + +R L+F + Sbjct: 37 YEIINEIWTPQEQSELADMVRSYSEFFSVISDQTPATDNIGEAVPYDPEKGCTHPLMVPS-RNGSHCILAPRLDIGRHYVLTGGNTGLKESYDKLVSRLLSFAQF 140
BLAST of mRNA_M-pyrifera_M_contig85746.19995.1 vs. uniprot
Match: A0A7S4MSZ5_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MSZ5_9EUKA) HSP 1 Score: 57.8 bits (138), Expect = 2.760e-7 Identity = 29/71 (40.85%), Postives = 39/71 (54.93%), Query Frame = 1 Query: 100 TAKESIGEGGKM-GTAACDHPLLVPGGVNGSECKFPGRLDTALSYVRHGGHHGVKEPFEVMATRALTFLSY 309 T E IGE + C+HP +VP VNG+ C PGR+D Y+ GG G+KE +E + R L+F Y Sbjct: 77 TRHEHIGEALPLPADRKCEHPYMVPS-VNGTHCVLPGRIDVGRHYILGGGVQGIKETYEDLVARLLSFGRY 146
BLAST of mRNA_M-pyrifera_M_contig85746.19995.1 vs. uniprot
Match: A0A6G0V1A0_9BILA (Uncharacterized protein n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0V1A0_9BILA) HSP 1 Score: 53.9 bits (128), Expect = 6.150e-6 Identity = 33/95 (34.74%), Postives = 49/95 (51.58%), Query Frame = 1 Query: 40 EALREMVEGFGTYNTALGDVT----AKESIGEGGK-MGTAACDHPLLVPGGVNGSECKFPGRLDTALSYVRHGGHHGVKEPFEVMATRALTFLSY 309 E L MV+ ++ T D+T E IGE + +C L+P + EC P R D A ++++GG G+KE +E++ATR LTF Y Sbjct: 52 EELLNMVKKVKSFPTNANDLTHLNRTYEHIGEAEPILANGSCRSSFLIPS-KDRKECVLPSRFDIAYHFMKYGGIDGLKEKYEMLATRMLTFGRY 145
BLAST of mRNA_M-pyrifera_M_contig85746.19995.1 vs. uniprot
Match: A9UU03_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UU03_MONBE) HSP 1 Score: 51.6 bits (122), Expect = 4.090e-5 Identity = 31/96 (32.29%), Postives = 48/96 (50.00%), Query Frame = 1 Query: 19 VFSASELEALREMVEGFGTYNTALGDVTA-KESIGEGGKM-GTAACDHPLLVPGGVNGSECKFPGRLDTALSYVRHGGHHGVKEPFEVMATRALTF 300 V++ E +AL + V Y + D T +E IGE + C HPL+ P N ++C F R+D Y+ GG +KEP++ + R L+F Sbjct: 172 VWTPQEEQALLQAVRQHRVYRCSTKDSTPLQEDIGEAHDLIPGVGCPHPLMQPN-RNDTKCIFAPRMDIGRHYIATGGRRALKEPYQRLVNRLLSF 266 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85746.19995.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85746.19995.1 >prot_M-pyrifera_M_contig85746.19995.1 ID=prot_M-pyrifera_M_contig85746.19995.1|Name=mRNA_M-pyrifera_M_contig85746.19995.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp YHYATEVFSASELEALREMVEGFGTYNTALGDVTAKESIGEGGKMGTAACback to top mRNA from alignment at M-pyrifera_M_contig85746:495..857+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85746.19995.1 ID=mRNA_M-pyrifera_M_contig85746.19995.1|Name=mRNA_M-pyrifera_M_contig85746.19995.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=363bp|location=Sequence derived from alignment at M-pyrifera_M_contig85746:495..857+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85746:495..857+ >mRNA_M-pyrifera_M_contig85746.19995.1 ID=mRNA_M-pyrifera_M_contig85746.19995.1|Name=mRNA_M-pyrifera_M_contig85746.19995.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig85746:495..857+ (Macrocystis pyrifera P11B4 male)back to top |