mRNA_M-pyrifera_M_contig85728.19985.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85728.19985.1 vs. uniprot
Match: A0A2E3MFR7_9GAMM (DUF4124 domain-containing protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MFR7_9GAMM) HSP 1 Score: 92.4 bits (228), Expect = 4.130e-21 Identity = 56/136 (41.18%), Postives = 79/136 (58.09%), Query Frame = 1 Query: 1 AEVYKWTDANGKVKYGDKPQHPNATAVDVAPKPPVNNELKQRQT---ETQAKRKQAENQQEIATTDAKAKAEMGKRDAQIEEACKRQQENMATLSEYGARAYTVMSDGETHYLSDEDRKKQIDSTQAFLDKYCKGV 399 A VYKWTD+ G V YG+ P PNAT VD+AP P N L+Q+Q E K+ E ++ T A AEM K +E+ C+ Q+N+ L +G R YT+ S+G HY +DE+R+ +I+ + K+CKGV Sbjct: 20 AAVYKWTDSQGNVHYGNSPDGPNATRVDIAPPPAPNKNLEQQQXXXXENYDSFKEHEAEKAEQTQQA---AEMEKYKKDVEKLCETYQKNVENLELWGRRVYTMDSEGGRHYFNDEERQARINDIKEKQAKFCKGV 152
BLAST of mRNA_M-pyrifera_M_contig85728.19985.1 vs. uniprot
Match: UPI0018AA141C (DUF4124 domain-containing protein n=1 Tax=Aliikangiella sp. G2MR2-5 TaxID=2788943 RepID=UPI0018AA141C) HSP 1 Score: 58.5 bits (140), Expect = 5.040e-8 Identity = 42/135 (31.11%), Postives = 67/135 (49.63%), Query Frame = 1 Query: 1 AEVYKWTDANGKVKYGDKPQHPNATAVDVAPKPPVN-NELKQRQTETQA----KRKQAENQQEIATTDAKAKAEMGKRDAQIEEACKRQQENMATLSEYGARAYTVMSDGETHYLSDEDRKKQIDSTQAFLDKYC 390 ++VYKW D +GKV Y DKPQ NAT +D+ K +N N ++ Q Q ++K+ + Q E + + E C+ + TL R T GE +++SDE+RKK+I+ + F+ + C Sbjct: 27 SKVYKWVDKDGKVHYSDKPQGKNATELDI--KKDINKNSQREAQNRNQELIDWQKKRLQVQMETEKEQKAXXXKEAREKKAHETKCRLANSQLGTLKAQ-IRILTANEKGEQYFMSDEERKKEINMLETFIKQNC 158
BLAST of mRNA_M-pyrifera_M_contig85728.19985.1 vs. uniprot
Match: A0A0T6ULN7_9PSED (DUF4124 domain-containing protein n=1 Tax=Pseudomonas sp. TTU2014-080ASC TaxID=1729724 RepID=A0A0T6ULN7_9PSED) HSP 1 Score: 57.0 bits (136), Expect = 1.390e-7 Identity = 45/128 (35.16%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 1 AEVYKWTDANGKVKYGDKPQHPNATAVDVAPKPPVNNELKQRQTETQAKRKQAENQQEIATTDAKAKAEMGKRDAQIEEACKRQQENMATLSEYGARAYTVMSDGETHYLSDEDRKKQIDSTQAFLDK 384 AE+Y+WTDANG+V +G +P A + V P+ ++L R+ E + + +QE A+ AKA+ KR Q ++ +R +AT++E G R + +DG Y SDE Q+DST++ L K Sbjct: 17 AEIYRWTDANGQVHFGQRPAGQGAEQIQVKPQVVERDQLT-REREARTNQFYDARRQEQASNTAKAREVQQKRAQQCQDLRRR----LATVAE-GGRYFRQEADGTRTYYSDE----QMDSTRSQLHK 134
BLAST of mRNA_M-pyrifera_M_contig85728.19985.1 vs. uniprot
Match: A0A7C1TX63_9GAMM (DUF4124 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1TX63_9GAMM) HSP 1 Score: 55.8 bits (133), Expect = 4.580e-7 Identity = 39/129 (30.23%), Postives = 61/129 (47.29%), Query Frame = 1 Query: 4 EVYKWTDANGKVKYGDKPQHPNATAVDVAPKPPVNNELKQRQTETQAKRKQAENQQEIATTDAKAKAEMGKRDAQIEEACKRQQENMATLSEYGARAYTVMSDGETHYLSDEDRKKQIDSTQAFLDKYC 390 +VYKWTD+ G + YG++P A +D+ K P ++ Q K E Q+ A+ KA K E C + +A G R Y + GE YLSD D ++++++ Q +DK+C Sbjct: 23 KVYKWTDSEGNIHYGERPPGTQAKEIDIH-KAPSSHNASPPGNSLQETNKLLETLQKERQQKAEKKAAAEKERKTREANCSYSKRRLAGYR-IGGRIYEIDDQGERSYLSDSDIQQRLETAQKEVDKWC 149
BLAST of mRNA_M-pyrifera_M_contig85728.19985.1 vs. uniprot
Match: A0A1H4PXP0_PSEAG (DUF4124 domain-containing protein n=8 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1H4PXP0_PSEAG) HSP 1 Score: 54.3 bits (129), Expect = 1.470e-6 Identity = 40/130 (30.77%), Postives = 65/130 (50.00%), Query Frame = 1 Query: 1 AEVYKWTDANGKVKYGDKPQHPNATAVDVAPKPPVNNELKQRQTETQAKRKQAENQQEIATTDAKAKAEMGKRDAQIEEACKRQQENMATLSEYGARAYTVMSDGETHYLSDEDRKKQIDSTQAFLDKYC 390 AE+Y+WTDANG+V +G +P A ++V P+ ++L R+ E +A R ++E A A A KR E C+ ++ +A++ E G Y +DG+ Y SDE Q+ + + C Sbjct: 16 AEIYRWTDANGQVHFGQRPSAAGAQQIEVKPQVVERDQLT-REREERASRFYDARREEQAQASALAAENQAKR----AEECREMRKKLASIPE-GRSYYRTEADGQRSYYSDEHVDTARQQLQSRVSERC 139
BLAST of mRNA_M-pyrifera_M_contig85728.19985.1 vs. uniprot
Match: UPI00118547C0 (DUF4124 domain-containing protein n=1 Tax=Pleionea sediminis TaxID=2569479 RepID=UPI00118547C0) HSP 1 Score: 53.9 bits (128), Expect = 2.360e-6 Identity = 44/128 (34.38%), Postives = 65/128 (50.78%), Query Frame = 1 Query: 7 VYKWTDANGKVKYGDKPQHPNATAVDVAPKPPVNNELKQRQTETQAKRKQAENQQEIATTDAKAKAEMGKRDAQIEEACKRQQENMATLSEYGARAYTVMSDGETHYLSDEDRKKQIDSTQAFLDKYC 390 +YKW DA G KYGD+P PK +K R + + A + +E TDA+ E+ K AQI +ACK + NM TL+ G+R + DGE L++E+ +++ TQ +D YC Sbjct: 25 LYKWKDAEGNTKYGDRP-----------PKGVPFERIKVRGSNSSAAITEKIEAEENPQTDAQK--EVAKMQAQITQACKIAKTNMETLNS-GSR---IKKDGEDRMLTEEEIEQKKVETQKQIDNYC 135
BLAST of mRNA_M-pyrifera_M_contig85728.19985.1 vs. uniprot
Match: A0A1G3EB12_9GAMM (DUF4124 domain-containing protein n=1 Tax=Pseudomonadales bacterium RIFCSPLOWO2_12_59_9 TaxID=1802009 RepID=A0A1G3EB12_9GAMM) HSP 1 Score: 53.5 bits (127), Expect = 2.870e-6 Identity = 41/133 (30.83%), Postives = 69/133 (51.88%), Query Frame = 1 Query: 1 AEVYKWTDANGKVKYGDKPQHPNATAVDVAPKPPVNNE---LKQRQTETQAKRKQAENQQEIATTDAKAKAEMGKRDAQIEEACKRQQENMATLSEYGARAYTVMSDGETHYLSDEDRKKQIDSTQAFLDKYC 390 AE+Y+WTDANG+V +G+ PQ AV + KPPV + +RQ T+ +Q+ A+ A+ ++ A+ + C++ +E A L ++G R Y + GE Y SD++ + +A L + C Sbjct: 17 AEIYRWTDANGQVHFGEAPQ---VGAVQIEVKPPVAQHDAAVAERQQRTERFFDARRQEQQQASEKAR------EQQAKTAQECQQLREQFAVL-DHGGRYYKTDAQGEMQYYSDKEIDRARSQLKARLTQRC 139
BLAST of mRNA_M-pyrifera_M_contig85728.19985.1 vs. uniprot
Match: A0A359DBE3_PSESP (DUF4124 domain-containing protein n=1 Tax=Pseudomonas sp. TaxID=306 RepID=A0A359DBE3_PSESP) HSP 1 Score: 53.1 bits (126), Expect = 4.010e-6 Identity = 41/126 (32.54%), Postives = 68/126 (53.97%), Query Frame = 1 Query: 1 AEVYKWTDANGKVKYGDKPQHPNATAVDVAPKPPVNNELKQRQTETQAKRKQAENQQEIATTDAKAKAEMGKRDAQIEEACKRQQENMATLSEYGARAYTVMSDGETHYLSDEDRKKQIDSTQAFL 378 AE+Y+WTDANG+V +G +P P A V+V P+ V + R+ E + +R + E A+A A +R A+ + C+ + +A + E G R + + ++GE Y SDE Q+D+ + L Sbjct: 16 AEIYRWTDANGQVHFGQRPAVPGAEQVEVTPQV-VERDAATREREARTERFYDARRDE----QAQAAAASAERQAKRAQECRELRGKLARMPE-GRRYFRLEANGERSYYSDE----QLDAARRQL 131
BLAST of mRNA_M-pyrifera_M_contig85728.19985.1 vs. uniprot
Match: A0A661CAV5_9GAMM (DUF4124 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661CAV5_9GAMM) HSP 1 Score: 53.1 bits (126), Expect = 7.820e-6 Identity = 40/130 (30.77%), Postives = 64/130 (49.23%), Query Frame = 1 Query: 1 AEVYKWTDANGKVKYGDKPQHPNATAVDVAPKPPVNNELKQRQTETQAKRKQAENQQEIATTDAKAKAEMGKRDAQIEEACKRQQENMATLSEYGARAYTVMSDGETHYLSDEDRKKQIDSTQAFLDKYC 390 AEVYKWTD NGKV YGDKP+ +A + + PV + + Q + E Q K QQE + K E GK++ Q++ C ++ + + + ++DE+RK + + ++ KYC Sbjct: 58 AEVYKWTDENGKVVYGDKPRSSDADKIKIK-SAPVQDPVVQGRNERQNKLLNVM-QQERDERNVLKKEEKGKKEEQMK-ICAEARKELQEIKDASFLYRPTDDPNNPEIITDEERKAEELKYKKYIKKYC 184
BLAST of mRNA_M-pyrifera_M_contig85728.19985.1 vs. uniprot
Match: M4X4H1_9PSED (Uncharacterized protein n=2 Tax=unclassified Pseudomonas TaxID=196821 RepID=M4X4H1_9PSED) HSP 1 Score: 52.0 bits (123), Expect = 1.100e-5 Identity = 44/127 (34.65%), Postives = 65/127 (51.18%), Query Frame = 1 Query: 1 AEVYKWTDANGKVKYGDKPQHPNATAVDVAPKPPVNNELKQRQTETQAKRKQAENQQEIATTDAKAKAEMGKRDAQIEEACKRQQENMATLSEYGARAYTVMSDGETHYLSDEDRKKQIDSTQAFLD 381 A++Y+WTDA GKV + + P P A ++V P+ V + R+ E + +R + E A KA + + AQ C R Q ++ TLS G R +T SDGE Y SD QID+ + L+ Sbjct: 17 ADIYRWTDAQGKVHFSETPP-PGAQRIEVKPQV-VERDAATREREERTRRFYDARRDEQAAAQTKAVRQQAELSAQ----CARWQHDLNTLS-LGGRYFTKGSDGERTYYSDA----QIDAARRELE 132 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85728.19985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85728.19985.1 >prot_M-pyrifera_M_contig85728.19985.1 ID=prot_M-pyrifera_M_contig85728.19985.1|Name=mRNA_M-pyrifera_M_contig85728.19985.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=140bp AEVYKWTDANGKVKYGDKPQHPNATAVDVAPKPPVNNELKQRQTETQAKRback to top mRNA from alignment at M-pyrifera_M_contig85728:438..857- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85728.19985.1 ID=mRNA_M-pyrifera_M_contig85728.19985.1|Name=mRNA_M-pyrifera_M_contig85728.19985.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=420bp|location=Sequence derived from alignment at M-pyrifera_M_contig85728:438..857- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85728:438..857- >mRNA_M-pyrifera_M_contig85728.19985.1 ID=mRNA_M-pyrifera_M_contig85728.19985.1|Name=mRNA_M-pyrifera_M_contig85728.19985.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig85728:438..857- (Macrocystis pyrifera P11B4 male)back to top |